RNA–Protein interactions for RNA: ENST00000427678.1

KDM3A-204, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-204ENST00000427678 CROCC2H7BZ55 1655 aa22.61■■□□□ 1.21
KDM3A-204ENST00000427678 RIMS1Q86UR5 1692 aaKnown RBP22.61■■□□□ 1.21
KDM3A-204ENST00000427678 ROCK1Q13464 1354 aa22.61■■□□□ 1.21
KDM3A-204ENST00000427678 ERBINQ96RT1 1412 aa22.6■■□□□ 1.21
KDM3A-204ENST00000427678 FER1L4A9Z1Z3 1794 aa22.58■■□□□ 1.21
KDM3A-204ENST00000427678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.57■■□□□ 1.26e-8■□□□□ 10
KDM3A-204ENST00000427678 ANKRD50Q9ULJ7 1429 aa22.56■■□□□ 1.2
KDM3A-204ENST00000427678 KANK1Q14678 1352 aa22.51■■□□□ 1.19
KDM3A-204ENST00000427678 EIF2AK4Q9P2K8 1649 aaKnown RBP22.51■■□□□ 1.19
KDM3A-204ENST00000427678 FAM135AQ9P2D6 1515 aa22.49■■□□□ 1.19
KDM3A-204ENST00000427678 KDM5DQ9BY66 1539 aa22.48■■□□□ 1.19
KDM3A-204ENST00000427678 NPATQ14207 1427 aa22.47■■□□□ 1.19
KDM3A-204ENST00000427678 RNF17Q9BXT8 1623 aaKnown RBP22.46■■□□□ 1.19
KDM3A-204ENST00000427678 FBXO31Q5XUX0 539 aaPredicted RBP22.46■■□□□ 1.19
KDM3A-204ENST00000427678 CLTCQ00610 1675 aaKnown RBP22.45■■□□□ 1.18
KDM3A-204ENST00000427678 MROH2AA6NES4 1674 aa22.43■■□□□ 1.18
KDM3A-204ENST00000427678 C3P01024 1663 aa22.42■■□□□ 1.18
KDM3A-204ENST00000427678 ABCC3O15438 1527 aa22.42■■□□□ 1.18
KDM3A-204ENST00000427678 SETD1BQ9UPS6 1966 aaKnown RBP22.41■■□□□ 1.18
KDM3A-204ENST00000427678 UHRF1BP1Q6BDS2 1440 aa22.4■■□□□ 1.18
KDM3A-204ENST00000427678 MROH1Q8NDA8 1641 aa22.4■■□□□ 1.18
KDM3A-204ENST00000427678 PRDM15P57071 1507 aaPredicted RBP22.4■■□□□ 1.18
KDM3A-204ENST00000427678 PZPP20742 1482 aa22.4■■□□□ 1.18
KDM3A-204ENST00000427678 HSPA2P54652 639 aa22.39■■□□□ 1.17
KDM3A-204ENST00000427678 LMTK3Q96Q04 1460 aa22.39■■□□□ 1.17
KDM3A-204ENST00000427678 NAIPQ13075 1403 aa22.38■■□□□ 1.17
KDM3A-204ENST00000427678 NUP155O75694 1391 aa22.38■■□□□ 1.17
KDM3A-204ENST00000427678 HFM1A2PYH4 1435 aa22.37■■□□□ 1.17
KDM3A-204ENST00000427678 TNRQ92752 1358 aa22.37■■□□□ 1.17
KDM3A-204ENST00000427678 ARHGAP31Q2M1Z3 1444 aa22.36■■□□□ 1.17
KDM3A-204ENST00000427678 DEPDC5O75140 1603 aa22.35■■□□□ 1.17
KDM3A-204ENST00000427678 ZC3H13Q5T200 1668 aaKnown RBP22.33■■□□□ 1.17
KDM3A-204ENST00000427678 LMTK2Q8IWU2 1503 aa22.32■■□□□ 1.16
KDM3A-204ENST00000427678 VWDEQ8N2E2 1590 aa22.32■■□□□ 1.16
KDM3A-204ENST00000427678 TRIM52Q96A61 297 aa22.31■■□□□ 1.16
KDM3A-204ENST00000427678 PREX1Q8TCU6 1659 aa22.29■■□□□ 1.16
KDM3A-204ENST00000427678 ERVK-7P63135 1459 aa22.28■■□□□ 1.16
KDM3A-204ENST00000427678 CAMSAP1Q5T5Y3 1602 aa22.27■■□□□ 1.16
KDM3A-204ENST00000427678 ACIN1Q9UKV3 1341 aaKnown RBP22.27■■□□□ 1.16
KDM3A-204ENST00000427678 THEMISQ8N1K5 641 aaPredicted RBP22.26■■□□□ 1.15
KDM3A-204ENST00000427678 CEP152O94986 1710 aa22.26■■□□□ 1.15
KDM3A-204ENST00000427678 UNC13BO14795 1591 aa22.25■■□□□ 1.15
KDM3A-204ENST00000427678 NLRP1Q9C000 1473 aa22.25■■□□□ 1.15
KDM3A-204ENST00000427678 A2ML1A8K2U0 1454 aa22.24■■□□□ 1.15
KDM3A-204ENST00000427678 RPRD2Q5VT52 1461 aaKnown RBP22.23■■□□□ 1.15
KDM3A-204ENST00000427678 SLC52A1Q9NWF4 448 aa22.23■■□□□ 1.15
KDM3A-204ENST00000427678 DMRT2Q9Y5R5 561 aa22.23■■□□□ 1.15
KDM3A-204ENST00000427678 SPATA31D1Q6ZQQ2 1576 aa22.23■■□□□ 1.15
KDM3A-204ENST00000427678 SETD5Q9C0A6 1442 aa22.23■■□□□ 1.15
KDM3A-204ENST00000427678 EFCAB6Q5THR3 1501 aa22.21■■□□□ 1.15
KDM3A-204ENST00000427678 IDI1Q13907 227 aa22.21■■□□□ 1.15
KDM3A-204ENST00000427678 STAG3Q9UJ98 1225 aa22.21■■□□□ 1.15
KDM3A-204ENST00000427678 SLC4A1APQ9BWU0 796 aaKnown RBP22.2■■□□□ 1.14
KDM3A-204ENST00000427678 GCC2Q8IWJ2 1684 aa22.2■■□□□ 1.14
KDM3A-204ENST00000427678 NOS1P29475 1434 aa22.19■■□□□ 1.14
KDM3A-204ENST00000427678 CEP170BQ9Y4F5 1589 aaPredicted RBP22.19■■□□□ 1.14
KDM3A-204ENST00000427678 MYO3AQ8NEV4 1616 aa22.18■■□□□ 1.14
KDM3A-204ENST00000427678 PKD2Q13563 968 aa22.18■■□□□ 1.14
KDM3A-204ENST00000427678 TET3O43151 1660 aa22.17■■□□□ 1.14
KDM3A-204ENST00000427678 IQGAP3Q86VI3 1631 aa22.17■■□□□ 1.14
KDM3A-204ENST00000427678 NCKAP5LQ9HCH0 1330 aa22.16■■□□□ 1.14
KDM3A-204ENST00000427678 ANKLE2Q86XL3 938 aa22.16■■□□□ 1.14
KDM3A-204ENST00000427678 CFAP65Q6ZU64 1925 aaKnown RBP22.16■■□□□ 1.14
KDM3A-204ENST00000427678 HRCP23327 699 aa22.15■■□□□ 1.14
KDM3A-204ENST00000427678 UGGT1Q9NYU2 1555 aa22.14■■□□□ 1.13
KDM3A-204ENST00000427678 RAB3GAP2Q9H2M9 1393 aa22.13■■□□□ 1.13
KDM3A-204ENST00000427678 MPHOSPH9Q99550 1183 aa22.13■■□□□ 1.13
KDM3A-204ENST00000427678 PLA2R1Q13018 1463 aa22.13■■□□□ 1.13
KDM3A-204ENST00000427678 ZNF142P52746 1687 aaPredicted RBP22.11■■□□□ 1.13
KDM3A-204ENST00000427678 EID1Q9Y6B2 187 aa22.09■■□□□ 1.13
KDM3A-204ENST00000427678 CHGAP10645 457 aaKnown RBP22.08■■□□□ 1.13
KDM3A-204ENST00000427678 TRIM26Q12899 539 aaPredicted RBP22.08■■□□□ 1.13
KDM3A-204ENST00000427678 PTPRTO14522 1441 aa22.07■■□□□ 1.12
KDM3A-204ENST00000427678 TXNDC2Q86VQ3 553 aa22.07■■□□□ 1.12
KDM3A-204ENST00000427678 SYNMO15061 1565 aa22.07■■□□□ 1.12
KDM3A-204ENST00000427678 E9PCH4 1651 aa22.07■■□□□ 1.12
KDM3A-204ENST00000427678 HDGFP51858 240 aaKnown RBP22.06■■□□□ 1.12
KDM3A-204ENST00000427678 TMEM2Q9UHN6 1383 aa22.04■■□□□ 1.12
KDM3A-204ENST00000427678 FOXD1Q16676 465 aa22.04■■□□□ 1.12
KDM3A-204ENST00000427678 STRCQ7RTU9 1775 aa22.03■■□□□ 1.12
KDM3A-204ENST00000427678 LTKP29376 864 aa22.02■■□□□ 1.12
KDM3A-204ENST00000427678 PIK3C2BO00750 1634 aa22■■□□□ 1.11
KDM3A-204ENST00000427678 ARHGAP23Q9P227 1491 aa21.98■■□□□ 1.11
KDM3A-204ENST00000427678 UBR1Q8IWV7 1749 aa21.98■■□□□ 1.11
KDM3A-204ENST00000427678 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.98■■□□□ 1.11
KDM3A-204ENST00000427678 SLIT1O75093 1534 aa21.97■■□□□ 1.11
KDM3A-204ENST00000427678 NPHP4O75161 1426 aaPredicted RBP21.97■■□□□ 1.11
KDM3A-204ENST00000427678 PPP1R15AO75807 674 aaPredicted RBP21.96■■□□□ 1.11
KDM3A-204ENST00000427678 ZNF326Q5BKZ1 582 aaKnown RBP21.96■■□□□ 1.11
KDM3A-204ENST00000427678 MED14O60244 1454 aa21.96■■□□□ 1.11
KDM3A-204ENST00000427678 SCAF11Q99590 1463 aaKnown RBP21.96■■□□□ 1.11
KDM3A-204ENST00000427678 ADGRB3O60242 1522 aa21.96■■□□□ 1.11
KDM3A-204ENST00000427678 KDM5AP29375 1690 aaKnown RBP21.95■■□□□ 1.1
KDM3A-204ENST00000427678 BCANQ96GW7 911 aa21.94■■□□□ 1.1
KDM3A-204ENST00000427678 TRPM2O94759 1503 aa21.93■■□□□ 1.1
KDM3A-204ENST00000427678 RIMS2Q9UQ26 1411 aa21.92■■□□□ 1.1
KDM3A-204ENST00000427678 SPHKAPQ2M3C7 1700 aa21.91■■□□□ 1.1
KDM3A-204ENST00000427678 CCDC144AA2RUR9 1427 aa21.9■■□□□ 1.1
KDM3A-204ENST00000427678 NUTM2DQ5VT03 806 aaPredicted RBP21.9■■□□□ 1.1
KDM3A-204ENST00000427678 TMEM131LA2VDJ0 1609 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms