RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 HSPA2P54652 639 aa24.01■■□□□ 1.43
CLK3P2-201ENST00000427566 RRBP1Q9P2E9 1410 aaKnown RBP24■■□□□ 1.43
CLK3P2-201ENST00000427566 KIF15Q9NS87 1388 aa24■■□□□ 1.43
CLK3P2-201ENST00000427566 PTPRKQ15262 1439 aa23.99■■□□□ 1.43
CLK3P2-201ENST00000427566 PPP6R1Q9UPN7 881 aa23.99■■□□□ 1.43
CLK3P2-201ENST00000427566 RNF17Q9BXT8 1623 aaKnown RBP23.98■■□□□ 1.43
CLK3P2-201ENST00000427566 UHRF1BP1Q6BDS2 1440 aa23.97■■□□□ 1.43
CLK3P2-201ENST00000427566 ANKRD30AQ9BXX3 1397 aa23.97■■□□□ 1.43
CLK3P2-201ENST00000427566 KDM5DQ9BY66 1539 aa23.96■■□□□ 1.43
CLK3P2-201ENST00000427566 WASHC2CQ9Y4E1 1318 aa23.96■■□□□ 1.43
CLK3P2-201ENST00000427566 ITGAEP38570 1179 aa23.96■■□□□ 1.43
CLK3P2-201ENST00000427566 CEP152O94986 1710 aa23.95■■□□□ 1.42
CLK3P2-201ENST00000427566 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.94■■□□□ 1.42
CLK3P2-201ENST00000427566 CFAP65Q6ZU64 1925 aaKnown RBP23.93■■□□□ 1.42
CLK3P2-201ENST00000427566 ZC3H13Q5T200 1668 aaKnown RBP23.91■■□□□ 1.42
CLK3P2-201ENST00000427566 FAM135AQ9P2D6 1515 aa23.91■■□□□ 1.42
CLK3P2-201ENST00000427566 NCOA1Q15788 1441 aa23.91■■□□□ 1.42
CLK3P2-201ENST00000427566 ERBINQ96RT1 1412 aa23.91■■□□□ 1.42
CLK3P2-201ENST00000427566 NPATQ14207 1427 aa23.9■■□□□ 1.42
CLK3P2-201ENST00000427566 MROH1Q8NDA8 1641 aa23.89■■□□□ 1.42
CLK3P2-201ENST00000427566 ADGRL2O95490 1459 aa23.89■■□□□ 1.41
CLK3P2-201ENST00000427566 MYO3AQ8NEV4 1616 aa23.89■■□□□ 1.41
CLK3P2-201ENST00000427566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.88■■□□□ 1.41
CLK3P2-201ENST00000427566 ABCC3O15438 1527 aa23.86■■□□□ 1.41
CLK3P2-201ENST00000427566 CAMSAP1Q5T5Y3 1602 aa23.85■■□□□ 1.41
CLK3P2-201ENST00000427566 FBXO31Q5XUX0 539 aaPredicted RBP23.84■■□□□ 1.41
CLK3P2-201ENST00000427566 DEPDC5O75140 1603 aa23.84■■□□□ 1.41
CLK3P2-201ENST00000427566 PZPP20742 1482 aa23.84■■□□□ 1.41
CLK3P2-201ENST00000427566 PRDM15P57071 1507 aaPredicted RBP23.83■■□□□ 1.4
CLK3P2-201ENST00000427566 ZNF142P52746 1687 aaPredicted RBP23.82■■□□□ 1.4
CLK3P2-201ENST00000427566 STRCQ7RTU9 1775 aa23.81■■□□□ 1.4
CLK3P2-201ENST00000427566 CEP170BQ9Y4F5 1589 aaPredicted RBP23.8■■□□□ 1.4
CLK3P2-201ENST00000427566 KANK1Q14678 1352 aa23.8■■□□□ 1.4
CLK3P2-201ENST00000427566 ANKRD50Q9ULJ7 1429 aa23.79■■□□□ 1.4
CLK3P2-201ENST00000427566 ROCK1Q13464 1354 aa23.79■■□□□ 1.4
CLK3P2-201ENST00000427566 TNRQ92752 1358 aa23.79■■□□□ 1.4
CLK3P2-201ENST00000427566 A2ML1A8K2U0 1454 aa23.72■■□□□ 1.39
CLK3P2-201ENST00000427566 SPATA31D1Q6ZQQ2 1576 aa23.71■■□□□ 1.39
CLK3P2-201ENST00000427566 ERVK-7P63135 1459 aa23.7■■□□□ 1.38
CLK3P2-201ENST00000427566 VWDEQ8N2E2 1590 aa23.69■■□□□ 1.38
CLK3P2-201ENST00000427566 DMRT2Q9Y5R5 561 aa23.68■■□□□ 1.38
CLK3P2-201ENST00000427566 UNC13BO14795 1591 aa23.67■■□□□ 1.38
CLK3P2-201ENST00000427566 NAIPQ13075 1403 aa23.67■■□□□ 1.38
CLK3P2-201ENST00000427566 NLRP1Q9C000 1473 aa23.66■■□□□ 1.38
CLK3P2-201ENST00000427566 NCKAP5LQ9HCH0 1330 aa23.66■■□□□ 1.38
CLK3P2-201ENST00000427566 LMTK2Q8IWU2 1503 aa23.65■■□□□ 1.38
CLK3P2-201ENST00000427566 ARHGAP31Q2M1Z3 1444 aa23.65■■□□□ 1.38
CLK3P2-201ENST00000427566 UGGT1Q9NYU2 1555 aa23.64■■□□□ 1.38
CLK3P2-201ENST00000427566 POLR1AO95602 1720 aaPredicted RBP23.64■■□□□ 1.37
CLK3P2-201ENST00000427566 EFCAB6Q5THR3 1501 aa23.64■■□□□ 1.37
CLK3P2-201ENST00000427566 TET3O43151 1660 aa23.63■■□□□ 1.37
CLK3P2-201ENST00000427566 GCC2Q8IWJ2 1684 aa23.63■■□□□ 1.37
CLK3P2-201ENST00000427566 HFM1A2PYH4 1435 aa23.63■■□□□ 1.37
CLK3P2-201ENST00000427566 PLA2R1Q13018 1463 aa23.62■■□□□ 1.37
CLK3P2-201ENST00000427566 UBR1Q8IWV7 1749 aa23.59■■□□□ 1.37
CLK3P2-201ENST00000427566 THEMISQ8N1K5 641 aaPredicted RBP23.59■■□□□ 1.37
CLK3P2-201ENST00000427566 PTPRTO14522 1441 aa23.59■■□□□ 1.37
CLK3P2-201ENST00000427566 IQGAP3Q86VI3 1631 aa23.59■■□□□ 1.37
CLK3P2-201ENST00000427566 PIK3C2BO00750 1634 aa23.58■■□□□ 1.36
CLK3P2-201ENST00000427566 PKD2Q13563 968 aa23.57■■□□□ 1.36
CLK3P2-201ENST00000427566 NUP155O75694 1391 aa23.57■■□□□ 1.36
CLK3P2-201ENST00000427566 E9PCH4 1651 aa23.56■■□□□ 1.36
CLK3P2-201ENST00000427566 SYNMO15061 1565 aa23.55■■□□□ 1.36
CLK3P2-201ENST00000427566 STAG3Q9UJ98 1225 aa23.54■■□□□ 1.36
CLK3P2-201ENST00000427566 ANKLE2Q86XL3 938 aa23.52■■□□□ 1.36
CLK3P2-201ENST00000427566 RPRD2Q5VT52 1461 aaKnown RBP23.51■■□□□ 1.35
CLK3P2-201ENST00000427566 NEURL4Q96JN8 1562 aa23.5■■□□□ 1.35
CLK3P2-201ENST00000427566 NOS1P29475 1434 aa23.5■■□□□ 1.35
CLK3P2-201ENST00000427566 MYO5BQ9ULV0 1848 aa23.49■■□□□ 1.35
CLK3P2-201ENST00000427566 IDI1Q13907 227 aa23.49■■□□□ 1.35
CLK3P2-201ENST00000427566 ILDR1Q86SU0 546 aaPredicted RBP23.47■■□□□ 1.35
CLK3P2-201ENST00000427566 TRIM52Q96A61 297 aa23.47■■□□□ 1.35
CLK3P2-201ENST00000427566 SETD5Q9C0A6 1442 aa23.47■■□□□ 1.35
CLK3P2-201ENST00000427566 CERKQ8TCT0 537 aa23.46■■□□□ 1.35
CLK3P2-201ENST00000427566 IQGAP1P46940 1657 aa23.46■■□□□ 1.35
CLK3P2-201ENST00000427566 KDM5AP29375 1690 aaKnown RBP23.45■■□□□ 1.34
CLK3P2-201ENST00000427566 SPHKAPQ2M3C7 1700 aa23.44■■□□□ 1.34
CLK3P2-201ENST00000427566 SLC52A1Q9NWF4 448 aa23.43■■□□□ 1.34
CLK3P2-201ENST00000427566 ADGRB3O60242 1522 aa23.43■■□□□ 1.34
CLK3P2-201ENST00000427566 NPHP4O75161 1426 aaPredicted RBP23.43■■□□□ 1.34
CLK3P2-201ENST00000427566 ZNF335Q9H4Z2 1342 aaPredicted RBP23.42■■□□□ 1.34
CLK3P2-201ENST00000427566 RAB3GAP2Q9H2M9 1393 aa23.42■■□□□ 1.34
CLK3P2-201ENST00000427566 CHGAP10645 457 aaKnown RBP23.42■■□□□ 1.34
CLK3P2-201ENST00000427566 TXNDC2Q86VQ3 553 aa23.41■■□□□ 1.34
CLK3P2-201ENST00000427566 LTBP4Q8N2S1 1624 aa23.41■■□□□ 1.34
CLK3P2-201ENST00000427566 SLIT1O75093 1534 aa23.4■■□□□ 1.34
CLK3P2-201ENST00000427566 EID1Q9Y6B2 187 aa23.4■■□□□ 1.34
CLK3P2-201ENST00000427566 SCAF11Q99590 1463 aaKnown RBP23.39■■□□□ 1.34
CLK3P2-201ENST00000427566 MED14O60244 1454 aa23.39■■□□□ 1.33
CLK3P2-201ENST00000427566 FBXO41Q8TF61 875 aa23.38■■□□□ 1.33
CLK3P2-201ENST00000427566 ARHGAP23Q9P227 1491 aa23.38■■□□□ 1.33
CLK3P2-201ENST00000427566 LTKP29376 864 aa23.37■■□□□ 1.33
CLK3P2-201ENST00000427566 TMEM2Q9UHN6 1383 aa23.37■■□□□ 1.33
CLK3P2-201ENST00000427566 TMEM131LA2VDJ0 1609 aa23.36■■□□□ 1.33
CLK3P2-201ENST00000427566 TRIM26Q12899 539 aaPredicted RBP23.35■■□□□ 1.33
CLK3P2-201ENST00000427566 SLC4A1APQ9BWU0 796 aaKnown RBP23.34■■□□□ 1.33
CLK3P2-201ENST00000427566 SENP3Q9H4L4 574 aaPredicted RBP23.32■■□□□ 1.32
CLK3P2-201ENST00000427566 BCANQ96GW7 911 aa23.31■■□□□ 1.32
CLK3P2-201ENST00000427566 FOXD1Q16676 465 aa23.3■■□□□ 1.32
CLK3P2-201ENST00000427566 KIF1BO60333 1816 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms