RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 SEPT11Q9NVA2 429 aaKnown RBP9.58□□□□□ -0.88
LINC00649-203ENST00000427447 ZMAT2Q96NC0 199 aaKnown RBP9.57□□□□□ -0.88
LINC00649-203ENST00000427447 GOLGA6L9A6NEM1 432 aa9.57□□□□□ -0.88
LINC00649-203ENST00000427447 TRIM63Q969Q1 353 aa9.57□□□□□ -0.88
LINC00649-203ENST00000427447 KIF16BQ96L93 1317 aa9.57□□□□□ -0.88
LINC00649-203ENST00000427447 LOC105371045A0A1W2PR82 267 aa9.56□□□□□ -0.88
LINC00649-203ENST00000427447 RBM25P49756 843 aaKnown RBP9.56□□□□□ -0.88
LINC00649-203ENST00000427447 TTLL5Q6EMB2 1281 aa9.56□□□□□ -0.88
LINC00649-203ENST00000427447 CCDC175P0C221 793 aa9.56□□□□□ -0.88
LINC00649-203ENST00000427447 KLHL34Q8N239 644 aa9.56□□□□□ -0.88
LINC00649-203ENST00000427447 CHMP4AQ9BY43 222 aa9.56□□□□□ -0.88
LINC00649-203ENST00000427447 IPO9Q96P70 1041 aaKnown RBP9.56□□□□□ -0.88
LINC00649-203ENST00000427447 ZBTB17Q13105 803 aa9.55□□□□□ -0.88
LINC00649-203ENST00000427447 ZNHIT6Q9NWK9 470 aaKnown RBP9.55□□□□□ -0.88
LINC00649-203ENST00000427447 UIMC1Q96RL1 719 aa9.55□□□□□ -0.88
LINC00649-203ENST00000427447 NOL8Q76FK4 1167 aaKnown RBP9.55□□□□□ -0.88
LINC00649-203ENST00000427447 CCDC91Q7Z6B0 441 aa9.54□□□□□ -0.88
LINC00649-203ENST00000427447 PLEKHG5O94827 1062 aa9.54□□□□□ -0.88
LINC00649-203ENST00000427447 MCCP23508 829 aa9.54□□□□□ -0.88
LINC00649-203ENST00000427447 FAM184BQ9ULE4 1060 aa9.54□□□□□ -0.88
LINC00649-203ENST00000427447 RBM10P98175 930 aaKnown RBP9.53□□□□□ -0.88
LINC00649-203ENST00000427447 GORABQ5T7V8 394 aa9.53□□□□□ -0.88
LINC00649-203ENST00000427447 CLASRPQ8N2M8 674 aaKnown RBP9.53□□□□□ -0.88
LINC00649-203ENST00000427447 DNAI2Q9GZS0 605 aa9.53□□□□□ -0.88
LINC00649-203ENST00000427447 GIGYF2Q6Y7W6 1299 aaKnown RBP9.53□□□□□ -0.88
LINC00649-203ENST00000427447 KIF3CO14782 793 aa9.53□□□□□ -0.88
LINC00649-203ENST00000427447 CT47A1Q5JQC4 288 aaPredicted RBP9.53□□□□□ -0.88
LINC00649-203ENST00000427447 TIGD1Q96MW7 591 aa9.52□□□□□ -0.89
LINC00649-203ENST00000427447 CFAP53Q96M91 514 aa9.52□□□□□ -0.89
LINC00649-203ENST00000427447 ITPRIPQ8IWB1 547 aa9.52□□□□□ -0.89
LINC00649-203ENST00000427447 LETM1O95202 739 aaPredicted RBP9.51□□□□□ -0.89
LINC00649-203ENST00000427447 BCL11BQ9C0K0 894 aaPredicted RBP9.51□□□□□ -0.89
LINC00649-203ENST00000427447 CENPHQ9H3R5 247 aa9.51□□□□□ -0.89
LINC00649-203ENST00000427447 CEP89Q96ST8 783 aa9.51□□□□□ -0.89
LINC00649-203ENST00000427447 SRPK2P78362 688 aaKnown RBP9.5□□□□□ -0.89
LINC00649-203ENST00000427447 SUPT16HQ9Y5B9 1047 aaKnown RBP9.5□□□□□ -0.89
LINC00649-203ENST00000427447 LUZP1Q86V48 1076 aa9.49□□□□□ -0.89
LINC00649-203ENST00000427447 EIF3JO75822 258 aaKnown RBP9.49□□□□□ -0.89
LINC00649-203ENST00000427447 HSPA5P11021 654 aaKnown RBP9.49□□□□□ -0.89
LINC00649-203ENST00000427447 MAPK8IP2Q13387 824 aaPredicted RBP9.49□□□□□ -0.89
LINC00649-203ENST00000427447 GNL2Q13823 731 aaKnown RBP9.49□□□□□ -0.89
LINC00649-203ENST00000427447 SALL2Q9Y467 1007 aaPredicted RBP9.49□□□□□ -0.89
LINC00649-203ENST00000427447 DHX8Q14562 1220 aaKnown RBP9.49□□□□□ -0.89
LINC00649-203ENST00000427447 TSR1Q2NL82 804 aaKnown RBP9.49□□□□□ -0.89
LINC00649-203ENST00000427447 NF2P35240 595 aa9.49□□□□□ -0.89
LINC00649-203ENST00000427447 HDAC5Q9UQL6 1122 aa9.49□□□□□ -0.89
LINC00649-203ENST00000427447 FANCIQ9NVI1 1328 aa9.49□□□□□ -0.89
LINC00649-203ENST00000427447 TPM1P09493 284 aa9.48□□□□□ -0.89
LINC00649-203ENST00000427447 SH2D4BQ5SQS7 431 aa9.48□□□□□ -0.89
LINC00649-203ENST00000427447 RNF20Q5VTR2 975 aa9.48□□□□□ -0.89
LINC00649-203ENST00000427447 FAM9BQ8IZU0 186 aa9.47□□□□□ -0.89
LINC00649-203ENST00000427447 FGD1P98174 961 aa9.47□□□□□ -0.89
LINC00649-203ENST00000427447 DHX37Q8IY37 1157 aaKnown RBP9.47□□□□□ -0.89
LINC00649-203ENST00000427447 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.46□□□□□ -0.89
LINC00649-203ENST00000427447 CCDC97Q96F63 343 aaPredicted RBP9.46□□□□□ -0.89
LINC00649-203ENST00000427447 MS4A1P11836 297 aa9.46□□□□□ -0.89
LINC00649-203ENST00000427447 PRPF40AO75400 957 aaKnown RBP9.46□□□□□ -0.9
LINC00649-203ENST00000427447 MAP3K7CLP57077 242 aa9.46□□□□□ -0.9
LINC00649-203ENST00000427447 PPFIBP2Q8ND30 876 aa9.46□□□□□ -0.9
LINC00649-203ENST00000427447 ESF1Q9H501 851 aaKnown RBP9.46□□□□□ -0.9
LINC00649-203ENST00000427447 TONSLQ96HA7 1378 aa9.46□□□□□ -0.9
LINC00649-203ENST00000427447 BANK1Q8NDB2 785 aa9.46□□□□□ -0.9
LINC00649-203ENST00000427447 IPO4Q8TEX9 1081 aaKnown RBP9.46□□□□□ -0.9
LINC00649-203ENST00000427447 CGNQ9P2M7 1197 aaKnown RBP9.46□□□□□ -0.9
LINC00649-203ENST00000427447 DAAM2Q86T65 1068 aa9.45□□□□□ -0.9
LINC00649-203ENST00000427447 ZNF592Q92610 1267 aa9.45□□□□□ -0.9
LINC00649-203ENST00000427447 TMC1Q8TDI8 760 aa9.45□□□□□ -0.9
LINC00649-203ENST00000427447 MICALCLQ6ZW33 695 aa9.45□□□□□ -0.9
LINC00649-203ENST00000427447 PLEKHD1A6NEE1 506 aa9.44□□□□□ -0.9
LINC00649-203ENST00000427447 AKAP17AQ02040 695 aaKnown RBP9.44□□□□□ -0.9
LINC00649-203ENST00000427447 U2SURPO15042 1029 aaKnown RBP9.44□□□□□ -0.9
LINC00649-203ENST00000427447 CHMP2AO43633 222 aa9.44□□□□□ -0.9
LINC00649-203ENST00000427447 HDAC1Q13547 482 aaPredicted RBP9.44□□□□□ -0.9
LINC00649-203ENST00000427447 SMC1AQ14683 1233 aaKnown RBP9.44□□□□□ -0.9
LINC00649-203ENST00000427447 TERF2IPQ9NYB0 399 aa9.44□□□□□ -0.9
LINC00649-203ENST00000427447 LIMCH1Q9UPQ0 1083 aa9.44□□□□□ -0.9
LINC00649-203ENST00000427447 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.43□□□□□ -0.9
LINC00649-203ENST00000427447 V9GYY5 206 aaPredicted RBP9.43□□□□□ -0.9
LINC00649-203ENST00000427447 IPO7O95373 1038 aaKnown RBP9.43□□□□□ -0.9
LINC00649-203ENST00000427447 SATB2Q9UPW6 733 aa9.43□□□□□ -0.9
LINC00649-203ENST00000427447 TNNT1P13805 278 aa9.43□□□□□ -0.9
LINC00649-203ENST00000427447 GZF1Q9H116 711 aaPredicted RBP9.43□□□□□ -0.9
LINC00649-203ENST00000427447 CCDC39Q9UFE4 941 aa9.43□□□□□ -0.9
LINC00649-203ENST00000427447 A0A1B0GUA9 196 aa9.43□□□□□ -0.9
LINC00649-203ENST00000427447 RAD21O60216 631 aa9.43□□□□□ -0.9
LINC00649-203ENST00000427447 CCAR2Q8N163 923 aaKnown RBP9.43□□□□□ -0.9
LINC00649-203ENST00000427447 ANAPC15P60006 121 aa9.42□□□□□ -0.9
LINC00649-203ENST00000427447 HSP90AB2PQ58FF8 381 aa9.42□□□□□ -0.9
LINC00649-203ENST00000427447 GTPBP4Q9BZE4 634 aaKnown RBP9.42□□□□□ -0.9
LINC00649-203ENST00000427447 FBLN2P98095 1184 aa9.42□□□□□ -0.9
LINC00649-203ENST00000427447 MNAT1P51948 309 aa9.42□□□□□ -0.9
LINC00649-203ENST00000427447 LRCH2Q5VUJ6 765 aa9.42□□□□□ -0.9
LINC00649-203ENST00000427447 CCDC173Q0VFZ6 552 aa9.42□□□□□ -0.9
LINC00649-203ENST00000427447 DNAAF4Q8WXU2 420 aa9.42□□□□□ -0.9
LINC00649-203ENST00000427447 TRIM29Q14134 588 aa9.42□□□□□ -0.9
LINC00649-203ENST00000427447 CCAR1Q8IX12 1150 aaKnown RBP9.42□□□□□ -0.9
LINC00649-203ENST00000427447 PPM1EQ8WY54 764 aa9.42□□□□□ -0.9
LINC00649-203ENST00000427447 FBXW7Q969H0 707 aa9.42□□□□□ -0.9
LINC00649-203ENST00000427447 FMNL3Q8IVF7 1028 aa9.42□□□□□ -0.9
LINC00649-203ENST00000427447 E9PSI1 815 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms