RNA–Protein interactions for RNA: ENST00000427234.5

ITSN2-207, Transcript of intersectin 2, humanhuman

TSL 3

Gene ITSN2, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-207ENST00000427234 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
ITSN2-207ENST00000427234 ABCC5O15440 1437 aa17.11■□□□□ 0.33
ITSN2-207ENST00000427234 PTPRKQ15262 1439 aa17.11■□□□□ 0.33
ITSN2-207ENST00000427234 PTPN23Q9H3S7 1636 aa17.1■□□□□ 0.33
ITSN2-207ENST00000427234 CLTCQ00610 1675 aaKnown RBP17.1■□□□□ 0.33
ITSN2-207ENST00000427234 DMRT2Q9Y5R5 561 aa17.1■□□□□ 0.33
ITSN2-207ENST00000427234 TCOF1Q13428 1488 aaKnown RBP17.1■□□□□ 0.33
ITSN2-207ENST00000427234 ILDR1Q86SU0 546 aaPredicted RBP17.09■□□□□ 0.33
ITSN2-207ENST00000427234 FAM135AQ9P2D6 1515 aa17.09■□□□□ 0.33
ITSN2-207ENST00000427234 SHANK2Q9UPX8 1470 aa17.08■□□□□ 0.32
ITSN2-207ENST00000427234 DAPK1P53355 1430 aa17.06■□□□□ 0.32
ITSN2-207ENST00000427234 KDM5DQ9BY66 1539 aa17.06■□□□□ 0.32
ITSN2-207ENST00000427234 KIF15Q9NS87 1388 aa17.05■□□□□ 0.32
ITSN2-207ENST00000427234 RRP7BPQ9NSQ0 103 aa17.05■□□□□ 0.32
ITSN2-207ENST00000427234 DUOX2Q9NRD8 1548 aa17.05■□□□□ 0.32
ITSN2-207ENST00000427234 FBXO31Q5XUX0 539 aaPredicted RBP17.04■□□□□ 0.32
ITSN2-207ENST00000427234 PZPP20742 1482 aa17.03■□□□□ 0.32
ITSN2-207ENST00000427234 FAM50AQ14320 339 aaKnown RBP17.02■□□□□ 0.32
ITSN2-207ENST00000427234 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
ITSN2-207ENST00000427234 CHIC2Q9UKJ5 165 aa17.02■□□□□ 0.32
ITSN2-207ENST00000427234 DNMT1P26358 1616 aaKnown RBP17.02■□□□□ 0.31
ITSN2-207ENST00000427234 RNF17Q9BXT8 1623 aaKnown RBP17.02■□□□□ 0.31
ITSN2-207ENST00000427234 NCOA1Q15788 1441 aa17.02■□□□□ 0.31
ITSN2-207ENST00000427234 STRCQ7RTU9 1775 aa17.02■□□□□ 0.31
ITSN2-207ENST00000427234 ANKRD30AQ9BXX3 1397 aa17.02■□□□□ 0.31
ITSN2-207ENST00000427234 EIF2AK4Q9P2K8 1649 aaKnown RBP17.01■□□□□ 0.31
ITSN2-207ENST00000427234 KCNA4P22459 653 aa17.01■□□□□ 0.31
ITSN2-207ENST00000427234 PTPRTO14522 1441 aa17.01■□□□□ 0.31
ITSN2-207ENST00000427234 ERBINQ96RT1 1412 aa17.01■□□□□ 0.31
ITSN2-207ENST00000427234 TNRQ92752 1358 aa17.01■□□□□ 0.31
ITSN2-207ENST00000427234 FBXO41Q8TF61 875 aa17■□□□□ 0.31
ITSN2-207ENST00000427234 CROCC2H7BZ55 1655 aa17■□□□□ 0.31
ITSN2-207ENST00000427234 ABCC3O15438 1527 aa16.98■□□□□ 0.31
ITSN2-207ENST00000427234 CAMSAP1Q5T5Y3 1602 aa16.98■□□□□ 0.31
ITSN2-207ENST00000427234 MYO3AQ8NEV4 1616 aa16.98■□□□□ 0.31
ITSN2-207ENST00000427234 A2ML1A8K2U0 1454 aa16.98■□□□□ 0.31
ITSN2-207ENST00000427234 PKD2Q13563 968 aa16.97■□□□□ 0.31
ITSN2-207ENST00000427234 CERKQ8TCT0 537 aa16.97■□□□□ 0.31
ITSN2-207ENST00000427234 CEP170BQ9Y4F5 1589 aaPredicted RBP16.97■□□□□ 0.31
ITSN2-207ENST00000427234 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.31
ITSN2-207ENST00000427234 PLA2R1Q13018 1463 aa16.96■□□□□ 0.31
ITSN2-207ENST00000427234 ZNF142P52746 1687 aaPredicted RBP16.96■□□□□ 0.31
ITSN2-207ENST00000427234 ADGRL2O95490 1459 aa16.95■□□□□ 0.3
ITSN2-207ENST00000427234 NCBP3Q53F19 620 aaKnown RBP16.95■□□□□ 0.3
ITSN2-207ENST00000427234 MROH1Q8NDA8 1641 aa16.95■□□□□ 0.3
ITSN2-207ENST00000427234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.3
ITSN2-207ENST00000427234 ZC3H13Q5T200 1668 aaKnown RBP16.94■□□□□ 0.3
ITSN2-207ENST00000427234 NLRP1Q9C000 1473 aa16.93■□□□□ 0.3
ITSN2-207ENST00000427234 KANK1Q14678 1352 aa16.92■□□□□ 0.3
ITSN2-207ENST00000427234 PPARGC1BQ86YN6 1023 aaKnown RBP16.92■□□□□ 0.3
ITSN2-207ENST00000427234 THEMISQ8N1K5 641 aaPredicted RBP16.92■□□□□ 0.3
ITSN2-207ENST00000427234 PRDM15P57071 1507 aaPredicted RBP16.91■□□□□ 0.3
ITSN2-207ENST00000427234 ARHGAP31Q2M1Z3 1444 aa16.91■□□□□ 0.3
ITSN2-207ENST00000427234 ERVK-7P63135 1459 aa16.9■□□□□ 0.3
ITSN2-207ENST00000427234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.3
ITSN2-207ENST00000427234 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.3
ITSN2-207ENST00000427234 ANKRD50Q9ULJ7 1429 aa16.88■□□□□ 0.29
ITSN2-207ENST00000427234 ANKLE2Q86XL3 938 aa16.88■□□□□ 0.29
ITSN2-207ENST00000427234 DEPDC5O75140 1603 aa16.88■□□□□ 0.29
ITSN2-207ENST00000427234 ROCK1Q13464 1354 aa16.87■□□□□ 0.29
ITSN2-207ENST00000427234 UGGT1Q9NYU2 1555 aa16.86■□□□□ 0.29
ITSN2-207ENST00000427234 CEP152O94986 1710 aa16.86■□□□□ 0.29
ITSN2-207ENST00000427234 LMTK2Q8IWU2 1503 aa16.86■□□□□ 0.29
ITSN2-207ENST00000427234 VWDEQ8N2E2 1590 aa16.85■□□□□ 0.29
ITSN2-207ENST00000427234 LTBP4Q8N2S1 1624 aa16.83■□□□□ 0.28
ITSN2-207ENST00000427234 CFAP65Q6ZU64 1925 aaKnown RBP16.82■□□□□ 0.28
ITSN2-207ENST00000427234 ZNF335Q9H4Z2 1342 aaPredicted RBP16.82■□□□□ 0.28
ITSN2-207ENST00000427234 ITGAEP38570 1179 aa16.82■□□□□ 0.28
ITSN2-207ENST00000427234 MED14O60244 1454 aa16.79■□□□□ 0.28
ITSN2-207ENST00000427234 RRBP1Q9P2E9 1410 aaKnown RBP16.79■□□□□ 0.28
ITSN2-207ENST00000427234 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
ITSN2-207ENST00000427234 IDI1Q13907 227 aa16.78■□□□□ 0.28
ITSN2-207ENST00000427234 IQSEC2Q5JU85 1478 aa16.78■□□□□ 0.28
ITSN2-207ENST00000427234 NEURL4Q96JN8 1562 aa16.77■□□□□ 0.28
ITSN2-207ENST00000427234 NPHP4O75161 1426 aaPredicted RBP16.77■□□□□ 0.27
ITSN2-207ENST00000427234 NOS1P29475 1434 aa16.77■□□□□ 0.27
ITSN2-207ENST00000427234 EFCAB6Q5THR3 1501 aa16.76■□□□□ 0.27
ITSN2-207ENST00000427234 SLC52A1Q9NWF4 448 aa16.76■□□□□ 0.27
ITSN2-207ENST00000427234 STAG3Q9UJ98 1225 aa16.76■□□□□ 0.27
ITSN2-207ENST00000427234 POLR1AO95602 1720 aaPredicted RBP16.76■□□□□ 0.27
ITSN2-207ENST00000427234 RPRD2Q5VT52 1461 aaKnown RBP16.75■□□□□ 0.27
ITSN2-207ENST00000427234 LTKP29376 864 aa16.74■□□□□ 0.27
ITSN2-207ENST00000427234 TXNDC2Q86VQ3 553 aa16.74■□□□□ 0.27
ITSN2-207ENST00000427234 ARHGAP23Q9P227 1491 aa16.73■□□□□ 0.27
ITSN2-207ENST00000427234 UBR1Q8IWV7 1749 aa16.73■□□□□ 0.27
ITSN2-207ENST00000427234 EID1Q9Y6B2 187 aa16.73■□□□□ 0.27
ITSN2-207ENST00000427234 SLIT1O75093 1534 aa16.73■□□□□ 0.27
ITSN2-207ENST00000427234 RNF216Q9NWF9 866 aaPredicted RBP16.72■□□□□ 0.27
ITSN2-207ENST00000427234 NUP155O75694 1391 aa16.72■□□□□ 0.27
ITSN2-207ENST00000427234 TMEM2Q9UHN6 1383 aa16.72■□□□□ 0.27
ITSN2-207ENST00000427234 SCAF11Q99590 1463 aaKnown RBP16.72■□□□□ 0.27
ITSN2-207ENST00000427234 UNC13BO14795 1591 aa16.72■□□□□ 0.27
ITSN2-207ENST00000427234 HOXD11P31277 338 aaPredicted RBP16.71■□□□□ 0.27
ITSN2-207ENST00000427234 SYNMO15061 1565 aa16.71■□□□□ 0.27
ITSN2-207ENST00000427234 TET3O43151 1660 aa16.7■□□□□ 0.26
ITSN2-207ENST00000427234 PIK3C2BO00750 1634 aa16.7■□□□□ 0.26
ITSN2-207ENST00000427234 CPS1P31327 1500 aa16.69■□□□□ 0.26
ITSN2-207ENST00000427234 IQGAP1P46940 1657 aa16.69■□□□□ 0.26
ITSN2-207ENST00000427234 KDM5AP29375 1690 aaKnown RBP16.68■□□□□ 0.26
ITSN2-207ENST00000427234 UBAP1LF5GYI3 381 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms