RNA–Protein interactions for RNA: ENST00000427167.5

SEMA3C-204, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-204ENST00000427167 SHANK2Q9UPX8 1470 aa35.33■■■■□ 3.25
SEMA3C-204ENST00000427167 DNMT1P26358 1616 aaKnown RBP35.32■■■■□ 3.25
SEMA3C-204ENST00000427167 STRCQ7RTU9 1775 aa35.31■■■■□ 3.24
SEMA3C-204ENST00000427167 MYO3AQ8NEV4 1616 aa35.3■■■■□ 3.24
SEMA3C-204ENST00000427167 FAM135AQ9P2D6 1515 aa35.3■■■■□ 3.24
SEMA3C-204ENST00000427167 RNF17Q9BXT8 1623 aaKnown RBP35.28■■■■□ 3.24
SEMA3C-204ENST00000427167 EIF2AK4Q9P2K8 1649 aaKnown RBP35.28■■■■□ 3.24
SEMA3C-204ENST00000427167 DUOX2Q9NRD8 1548 aa35.28■■■■□ 3.24
SEMA3C-204ENST00000427167 KIF15Q9NS87 1388 aa35.27■■■■□ 3.24
SEMA3C-204ENST00000427167 RRP7BPQ9NSQ0 103 aa35.27■■■■□ 3.24
SEMA3C-204ENST00000427167 FAM50AQ14320 339 aaKnown RBP35.24■■■■□ 3.23
SEMA3C-204ENST00000427167 CHIC2Q9UKJ5 165 aa35.24■■■■□ 3.23
SEMA3C-204ENST00000427167 FBXO31Q5XUX0 539 aaPredicted RBP35.23■■■■□ 3.23
SEMA3C-204ENST00000427167 DMRT2Q9Y5R5 561 aa35.23■■■■□ 3.23
SEMA3C-204ENST00000427167 PZPP20742 1482 aa35.22■■■■□ 3.23
SEMA3C-204ENST00000427167 ZNF142P52746 1687 aaPredicted RBP35.22■■■■□ 3.23
SEMA3C-204ENST00000427167 CEP170BQ9Y4F5 1589 aaPredicted RBP35.21■■■■□ 3.23
SEMA3C-204ENST00000427167 CAMSAP1Q5T5Y3 1602 aa35.21■■■■□ 3.23
SEMA3C-204ENST00000427167 NCOA1Q15788 1441 aa35.2■■■■□ 3.23
SEMA3C-204ENST00000427167 MROH1Q8NDA8 1641 aa35.18■■■■□ 3.22
SEMA3C-204ENST00000427167 ABCC3O15438 1527 aa35.17■■■■□ 3.22
SEMA3C-204ENST00000427167 ERBINQ96RT1 1412 aa35.16■■■■□ 3.22
SEMA3C-204ENST00000427167 TNRQ92752 1358 aa35.16■■■■□ 3.22
SEMA3C-204ENST00000427167 ANKRD30AQ9BXX3 1397 aa35.16■■■■□ 3.22
SEMA3C-204ENST00000427167 ZC3H13Q5T200 1668 aaKnown RBP35.16■■■■□ 3.22
SEMA3C-204ENST00000427167 PPARGC1BQ86YN6 1023 aaKnown RBP35.15■■■■□ 3.22
SEMA3C-204ENST00000427167 CEP152O94986 1710 aa35.12■■■■□ 3.21
SEMA3C-204ENST00000427167 A2ML1A8K2U0 1454 aa35.11■■■■□ 3.21
SEMA3C-204ENST00000427167 PTPRTO14522 1441 aa35.1■■■■□ 3.21
SEMA3C-204ENST00000427167 FBXO41Q8TF61 875 aa35.09■■■■□ 3.21
SEMA3C-204ENST00000427167 NCKAP5LQ9HCH0 1330 aa35.08■■■■□ 3.21
SEMA3C-204ENST00000427167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.08■■■■□ 3.21
SEMA3C-204ENST00000427167 PRDM15P57071 1507 aaPredicted RBP35.07■■■■□ 3.21
SEMA3C-204ENST00000427167 PLA2R1Q13018 1463 aa35.05■■■■□ 3.2
SEMA3C-204ENST00000427167 CERKQ8TCT0 537 aa35.04■■■■□ 3.2
SEMA3C-204ENST00000427167 ADGRL2O95490 1459 aa35.03■■■■□ 3.2
SEMA3C-204ENST00000427167 DEPDC5O75140 1603 aa35.02■■■■□ 3.2
SEMA3C-204ENST00000427167 ERVK-7P63135 1459 aa34.99■■■■□ 3.19
SEMA3C-204ENST00000427167 NLRP1Q9C000 1473 aa34.99■■■■□ 3.19
SEMA3C-204ENST00000427167 PKD2Q13563 968 aa34.99■■■■□ 3.19
SEMA3C-204ENST00000427167 SPATA31D1Q6ZQQ2 1576 aa34.99■■■■□ 3.19
SEMA3C-204ENST00000427167 KANK1Q14678 1352 aa34.99■■■■□ 3.19
SEMA3C-204ENST00000427167 CFAP65Q6ZU64 1925 aaKnown RBP34.96■■■■□ 3.19
SEMA3C-204ENST00000427167 UGGT1Q9NYU2 1555 aa34.94■■■■□ 3.18
SEMA3C-204ENST00000427167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.91■■■■□ 3.18
SEMA3C-204ENST00000427167 ANKRD50Q9ULJ7 1429 aa34.9■■■■□ 3.18
SEMA3C-204ENST00000427167 ITGAEP38570 1179 aa34.9■■■■□ 3.18
SEMA3C-204ENST00000427167 ARHGAP31Q2M1Z3 1444 aa34.89■■■■□ 3.18
SEMA3C-204ENST00000427167 THEMISQ8N1K5 641 aaPredicted RBP34.89■■■■□ 3.18
SEMA3C-204ENST00000427167 POLR1AO95602 1720 aaPredicted RBP34.87■■■■□ 3.17
SEMA3C-204ENST00000427167 VWDEQ8N2E2 1590 aa34.86■■■■□ 3.17
SEMA3C-204ENST00000427167 LTBP4Q8N2S1 1624 aa34.84■■■■□ 3.17
SEMA3C-204ENST00000427167 LMTK2Q8IWU2 1503 aa34.83■■■■□ 3.17
SEMA3C-204ENST00000427167 ZNF335Q9H4Z2 1342 aaPredicted RBP34.82■■■■□ 3.17
SEMA3C-204ENST00000427167 ANKLE2Q86XL3 938 aa34.82■■■■□ 3.16
SEMA3C-204ENST00000427167 NEURL4Q96JN8 1562 aa34.81■■■■□ 3.16
SEMA3C-204ENST00000427167 ROCK1Q13464 1354 aa34.79■■■■□ 3.16
SEMA3C-204ENST00000427167 EFCAB6Q5THR3 1501 aa34.76■■■■□ 3.16
SEMA3C-204ENST00000427167 UBR1Q8IWV7 1749 aa34.75■■■■□ 3.15
SEMA3C-204ENST00000427167 NPHP4O75161 1426 aaPredicted RBP34.7■■■■□ 3.15
SEMA3C-204ENST00000427167 UNC13BO14795 1591 aa34.7■■■■□ 3.14
SEMA3C-204ENST00000427167 PIK3C2BO00750 1634 aa34.69■■■■□ 3.14
SEMA3C-204ENST00000427167 RRBP1Q9P2E9 1410 aaKnown RBP34.68■■■■□ 3.14
SEMA3C-204ENST00000427167 SYNMO15061 1565 aa34.67■■■■□ 3.14
SEMA3C-204ENST00000427167 MED14O60244 1454 aa34.66■■■■□ 3.14
SEMA3C-204ENST00000427167 STAG3Q9UJ98 1225 aa34.66■■■■□ 3.14
SEMA3C-204ENST00000427167 TET3O43151 1660 aa34.65■■■■□ 3.14
SEMA3C-204ENST00000427167 IQGAP1P46940 1657 aa34.65■■■■□ 3.14
SEMA3C-204ENST00000427167 NOS1P29475 1434 aa34.64■■■■□ 3.14
SEMA3C-204ENST00000427167 IQSEC2Q5JU85 1478 aa34.63■■■■□ 3.13
SEMA3C-204ENST00000427167 IDI1Q13907 227 aa34.62■■■■□ 3.13
SEMA3C-204ENST00000427167 RPRD2Q5VT52 1461 aaKnown RBP34.61■■■■□ 3.13
SEMA3C-204ENST00000427167 SCAF11Q99590 1463 aaKnown RBP34.6■■■■□ 3.13
SEMA3C-204ENST00000427167 GCC2Q8IWJ2 1684 aa34.6■■■■□ 3.13
SEMA3C-204ENST00000427167 SLIT1O75093 1534 aa34.59■■■■□ 3.13
SEMA3C-204ENST00000427167 ARHGAP23Q9P227 1491 aa34.58■■■■□ 3.13
SEMA3C-204ENST00000427167 TXNDC2Q86VQ3 553 aa34.58■■■■□ 3.13
SEMA3C-204ENST00000427167 IQGAP3Q86VI3 1631 aa34.56■■■■□ 3.12
SEMA3C-204ENST00000427167 LTKP29376 864 aa34.56■■■■□ 3.12
SEMA3C-204ENST00000427167 NUP155O75694 1391 aa34.56■■■■□ 3.12
SEMA3C-204ENST00000427167 EID1Q9Y6B2 187 aa34.55■■■■□ 3.12
SEMA3C-204ENST00000427167 TMEM2Q9UHN6 1383 aa34.53■■■■□ 3.12
SEMA3C-204ENST00000427167 KDM5AP29375 1690 aaKnown RBP34.53■■■■□ 3.12
SEMA3C-204ENST00000427167 ADGRB3O60242 1522 aa34.52■■■■□ 3.12
SEMA3C-204ENST00000427167 E9PCH4 1651 aa34.52■■■■□ 3.12
SEMA3C-204ENST00000427167 SLC52A1Q9NWF4 448 aa34.52■■■■□ 3.12
SEMA3C-204ENST00000427167 CPS1P31327 1500 aa34.51■■■■□ 3.12
SEMA3C-204ENST00000427167 UBAP1LF5GYI3 381 aa34.46■■■■□ 3.11
SEMA3C-204ENST00000427167 NAIPQ13075 1403 aa34.43■■■■□ 3.1
SEMA3C-204ENST00000427167 STRCP1A6NGW2 1772 aa34.4■■■■□ 3.1
SEMA3C-204ENST00000427167 MYO5BQ9ULV0 1848 aa34.39■■■■□ 3.1
SEMA3C-204ENST00000427167 CHGAP10645 457 aaKnown RBP34.39■■■■□ 3.1
SEMA3C-204ENST00000427167 TMEM131LA2VDJ0 1609 aa34.36■■■■□ 3.09
SEMA3C-204ENST00000427167 SENP3Q9H4L4 574 aaPredicted RBP34.34■■■■□ 3.09
SEMA3C-204ENST00000427167 HFM1A2PYH4 1435 aa34.33■■■■□ 3.09
SEMA3C-204ENST00000427167 BCANQ96GW7 911 aa34.32■■■■□ 3.08
SEMA3C-204ENST00000427167 SLC26A8Q96RN1 970 aa34.31■■■■□ 3.08
SEMA3C-204ENST00000427167 RIMS2Q9UQ26 1411 aa34.3■■■■□ 3.08
SEMA3C-204ENST00000427167 LRRC7Q96NW7 1537 aa34.3■■■■□ 3.08
SEMA3C-204ENST00000427167 ZFYVE9O95405 1425 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms