RNA–Protein interactions for RNA: ENST00000426967.5

CCHCR1-204, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 838 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-204ENST00000426967 GGT6Q6P531 493 aa28.73■■■□□ 2.19
CCHCR1-204ENST00000426967 TRIM52Q96A61 297 aa28.71■■■□□ 2.19
CCHCR1-204ENST00000426967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.69■■■□□ 2.18
CCHCR1-204ENST00000426967 KANK1Q14678 1352 aa28.69■■■□□ 2.18
CCHCR1-204ENST00000426967 NUP155O75694 1391 aa28.67■■■□□ 2.18
CCHCR1-204ENST00000426967 RNF17Q9BXT8 1623 aaKnown RBP28.66■■■□□ 2.18
CCHCR1-204ENST00000426967 SIGLEC1Q9BZZ2 1709 aa28.66■■■□□ 2.18
CCHCR1-204ENST00000426967 MLECQ14165 292 aa28.65■■■□□ 2.18
CCHCR1-204ENST00000426967 UNC13BO14795 1591 aa28.64■■■□□ 2.18
CCHCR1-204ENST00000426967 DEPDC5O75140 1603 aa28.64■■■□□ 2.18
CCHCR1-204ENST00000426967 WASHC2CQ9Y4E1 1318 aa28.62■■■□□ 2.17
CCHCR1-204ENST00000426967 PRDM15P57071 1507 aaPredicted RBP28.61■■■□□ 2.17
CCHCR1-204ENST00000426967 ESF1Q9H501 851 aaKnown RBP28.6■■■□□ 2.17
CCHCR1-204ENST00000426967 MROH1Q8NDA8 1641 aa28.59■■■□□ 2.17
CCHCR1-204ENST00000426967 KDM5DQ9BY66 1539 aa28.59■■■□□ 2.17
CCHCR1-204ENST00000426967 FAM135AQ9P2D6 1515 aa28.59■■■□□ 2.17
CCHCR1-204ENST00000426967 VWDEQ8N2E2 1590 aa28.58■■■□□ 2.17
CCHCR1-204ENST00000426967 MPHOSPH9Q99550 1183 aa28.56■■■□□ 2.16
CCHCR1-204ENST00000426967 SLC4A1APQ9BWU0 796 aaKnown RBP28.56■■■□□ 2.16
CCHCR1-204ENST00000426967 IQGAP3Q86VI3 1631 aa28.53■■■□□ 2.16
CCHCR1-204ENST00000426967 LMTK2Q8IWU2 1503 aa28.53■■■□□ 2.16
CCHCR1-204ENST00000426967 CNTLNQ9NXG0 1405 aa28.52■■■□□ 2.16
CCHCR1-204ENST00000426967 PZPP20742 1482 aa28.52■■■□□ 2.16
CCHCR1-204ENST00000426967 ABCC3O15438 1527 aa28.5■■■□□ 2.15
CCHCR1-204ENST00000426967 ZC3H13Q5T200 1668 aaKnown RBP28.48■■■□□ 2.15
CCHCR1-204ENST00000426967 PKD2Q13563 968 aa28.47■■■□□ 2.15
CCHCR1-204ENST00000426967 ARHGAP31Q2M1Z3 1444 aa28.44■■■□□ 2.14
CCHCR1-204ENST00000426967 ADAMTSL3P82987 1691 aa28.44■■■□□ 2.14
CCHCR1-204ENST00000426967 ZMYM3Q14202 1370 aa28.43■■■□□ 2.14
CCHCR1-204ENST00000426967 DHX57Q6P158 1386 aaKnown RBP28.43■■■□□ 2.14
CCHCR1-204ENST00000426967 TET3O43151 1660 aa28.42■■■□□ 2.14
CCHCR1-204ENST00000426967 CEP152O94986 1710 aa28.4■■■□□ 2.14
CCHCR1-204ENST00000426967 RPRD2Q5VT52 1461 aaKnown RBP28.4■■■□□ 2.14
CCHCR1-204ENST00000426967 CLTCQ00610 1675 aaKnown RBP28.39■■■□□ 2.14
CCHCR1-204ENST00000426967 EFCAB6Q5THR3 1501 aa28.38■■■□□ 2.13
CCHCR1-204ENST00000426967 CAMSAP1Q5T5Y3 1602 aa28.37■■■□□ 2.13
CCHCR1-204ENST00000426967 FER1L4A9Z1Z3 1794 aa28.37■■■□□ 2.13
CCHCR1-204ENST00000426967 NPATQ14207 1427 aa28.36■■■□□ 2.13
CCHCR1-204ENST00000426967 MROH2AA6NES4 1674 aa28.36■■■□□ 2.13
CCHCR1-204ENST00000426967 MADDQ8WXG6 1647 aa28.36■■■□□ 2.13
CCHCR1-204ENST00000426967 FOXD1Q16676 465 aa28.33■■■□□ 2.13
CCHCR1-204ENST00000426967 KDM4FA0A1W2PPD8 638 aa28.32■■■□□ 2.12
CCHCR1-204ENST00000426967 CCER1Q8TC90 406 aaPredicted RBP28.31■■■□□ 2.12
CCHCR1-204ENST00000426967 E9PCH4 1651 aa28.31■■■□□ 2.12
CCHCR1-204ENST00000426967 PTPRTO14522 1441 aa28.29■■■□□ 2.12
CCHCR1-204ENST00000426967 CLSPNQ9HAW4 1339 aa28.29■■■□□ 2.12
CCHCR1-204ENST00000426967 FBXO31Q5XUX0 539 aaPredicted RBP28.29■■■□□ 2.12
CCHCR1-204ENST00000426967 ANKRD30BQ9BXX2 1392 aa28.28■■■□□ 2.12
CCHCR1-204ENST00000426967 CEBPAP49715 358 aaPredicted RBP28.28■■■□□ 2.12
CCHCR1-204ENST00000426967 RIMS1Q86UR5 1692 aaKnown RBP28.28■■■□□ 2.12
CCHCR1-204ENST00000426967 NOS1P29475 1434 aa28.26■■■□□ 2.12
CCHCR1-204ENST00000426967 PTPRMP28827 1452 aa28.26■■■□□ 2.11
CCHCR1-204ENST00000426967 ERVK-7P63135 1459 aa28.24■■■□□ 2.11
CCHCR1-204ENST00000426967 PLA2R1Q13018 1463 aa28.22■■■□□ 2.11
CCHCR1-204ENST00000426967 SLC52A1Q9NWF4 448 aa28.22■■■□□ 2.11
CCHCR1-204ENST00000426967 C3P01024 1663 aa28.22■■■□□ 2.11
CCHCR1-204ENST00000426967 SPATA31D1Q6ZQQ2 1576 aa28.21■■■□□ 2.11
CCHCR1-204ENST00000426967 PLPPR3Q6T4P5 718 aa28.19■■■□□ 2.1
CCHCR1-204ENST00000426967 TNRQ92752 1358 aa28.19■■■□□ 2.1
CCHCR1-204ENST00000426967 PREX1Q8TCU6 1659 aa28.19■■■□□ 2.1
CCHCR1-204ENST00000426967 TRPM2O94759 1503 aa28.18■■■□□ 2.1
CCHCR1-204ENST00000426967 CCDC144AA2RUR9 1427 aa28.17■■■□□ 2.1
CCHCR1-204ENST00000426967 SPHKAPQ2M3C7 1700 aa28.16■■■□□ 2.1
CCHCR1-204ENST00000426967 CFAP65Q6ZU64 1925 aaKnown RBP28.14■■■□□ 2.1
CCHCR1-204ENST00000426967 IDI1Q13907 227 aa28.13■■■□□ 2.09
CCHCR1-204ENST00000426967 SYNMO15061 1565 aa28.11■■■□□ 2.09
CCHCR1-204ENST00000426967 SIN3AQ96ST3 1273 aa28.1■■■□□ 2.09
CCHCR1-204ENST00000426967 NLRP1Q9C000 1473 aa28.09■■■□□ 2.09
CCHCR1-204ENST00000426967 AEBP2Q6ZN18 517 aaPredicted RBP28.07■■■□□ 2.08
CCHCR1-204ENST00000426967 SETD1BQ9UPS6 1966 aaKnown RBP28.07■■■□□ 2.08
CCHCR1-204ENST00000426967 NEUROD1Q13562 356 aa28.06■■■□□ 2.08
CCHCR1-204ENST00000426967 PIK3C2BO00750 1634 aa28.05■■■□□ 2.08
CCHCR1-204ENST00000426967 CLTCL1P53675 1640 aa28.04■■■□□ 2.08
CCHCR1-204ENST00000426967 STAG3Q9UJ98 1225 aa28.04■■■□□ 2.08
CCHCR1-204ENST00000426967 UGGT1Q9NYU2 1555 aa28.03■■■□□ 2.08
CCHCR1-204ENST00000426967 CHGAP10645 457 aaKnown RBP28.02■■■□□ 2.08
CCHCR1-204ENST00000426967 TIMELESSQ9UNS1 1208 aa28■■■□□ 2.07
CCHCR1-204ENST00000426967 A2ML1A8K2U0 1454 aa27.99■■■□□ 2.07
CCHCR1-204ENST00000426967 UHRF1BP1Q6BDS2 1440 aa27.99■■■□□ 2.07
CCHCR1-204ENST00000426967 THEMISQ8N1K5 641 aaPredicted RBP27.97■■■□□ 2.07
CCHCR1-204ENST00000426967 SPATA31E1Q6ZUB1 1445 aa27.97■■■□□ 2.07
CCHCR1-204ENST00000426967 NEURL4Q96JN8 1562 aa27.97■■■□□ 2.07
CCHCR1-204ENST00000426967 RGL3Q3MIN7 710 aa27.95■■■□□ 2.06
CCHCR1-204ENST00000426967 RPGRIP1LQ68CZ1 1315 aa27.94■■■□□ 2.06
CCHCR1-204ENST00000426967 MYO3AQ8NEV4 1616 aa27.94■■■□□ 2.06
CCHCR1-204ENST00000426967 KIF1BO60333 1816 aa27.94■■■□□ 2.06
CCHCR1-204ENST00000426967 ZNF326Q5BKZ1 582 aaKnown RBP27.93■■■□□ 2.06
CCHCR1-204ENST00000426967 STAC3Q96MF2 364 aa27.93■■■□□ 2.06
CCHCR1-204ENST00000426967 ADGRB3O60242 1522 aa27.92■■■□□ 2.06
CCHCR1-204ENST00000426967 KDM5AP29375 1690 aaKnown RBP27.92■■■□□ 2.06
CCHCR1-204ENST00000426967 TONSLQ96HA7 1378 aa27.92■■■□□ 2.06
CCHCR1-204ENST00000426967 TMEM131LA2VDJ0 1609 aa27.92■■■□□ 2.06
CCHCR1-204ENST00000426967 CEP170BQ9Y4F5 1589 aaPredicted RBP27.91■■■□□ 2.06
CCHCR1-204ENST00000426967 HDGFP51858 240 aaKnown RBP27.91■■■□□ 2.06
CCHCR1-204ENST00000426967 L3MBTL2Q969R5 705 aa27.88■■■□□ 2.05
CCHCR1-204ENST00000426967 ZNF142P52746 1687 aaPredicted RBP27.87■■■□□ 2.05
CCHCR1-204ENST00000426967 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.86■■■□□ 2.05
CCHCR1-204ENST00000426967 UBR1Q8IWV7 1749 aa27.86■■■□□ 2.05
CCHCR1-204ENST00000426967 DCAF11Q8TEB1 546 aa27.85■■■□□ 2.05
CCHCR1-204ENST00000426967 TMEM2Q9UHN6 1383 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms