RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 KDM6BO15054 1643 aa13.34□□□□□ -0.27
CTCFL-206ENST00000426658 ANKRD30AQ9BXX3 1397 aa13.34□□□□□ -0.27
CTCFL-206ENST00000426658 ABCC5O15440 1437 aa13.33□□□□□ -0.27
CTCFL-206ENST00000426658 NFKBIBQ15653 356 aa13.33□□□□□ -0.28
CTCFL-206ENST00000426658 BRPF3Q9ULD4 1205 aa13.33□□□□□ -0.28
CTCFL-206ENST00000426658 KIAA1107Q9UPP5 1409 aa13.33□□□□□ -0.28
CTCFL-206ENST00000426658 SLC24A1O60721 1099 aa13.33□□□□□ -0.28
CTCFL-206ENST00000426658 GCC2Q8IWJ2 1684 aa13.32□□□□□ -0.28
CTCFL-206ENST00000426658 SKAP1Q86WV1 359 aa13.31□□□□□ -0.28
CTCFL-206ENST00000426658 MAGI3Q5TCQ9 1506 aa13.31□□□□□ -0.28
CTCFL-206ENST00000426658 SAMD9Q5K651 1589 aa13.29□□□□□ -0.28
CTCFL-206ENST00000426658 FRAT1Q92837 279 aaPredicted RBP13.29□□□□□ -0.28
CTCFL-206ENST00000426658 FAM161AQ3B820 660 aa13.28□□□□□ -0.28
CTCFL-206ENST00000426658 CENPQQ7L2Z9 268 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-206ENST00000426658 CCDC146Q8IYE0 955 aa13.27□□□□□ -0.29
CTCFL-206ENST00000426658 ARHGEF11O15085 1522 aa13.26□□□□□ -0.29
CTCFL-206ENST00000426658 LRPPRCP42704 1394 aaKnown RBP13.26□□□□□ -0.29
CTCFL-206ENST00000426658 TMF1P82094 1093 aa13.26□□□□□ -0.29
CTCFL-206ENST00000426658 PANK3Q9H999 370 aa13.25□□□□□ -0.29
CTCFL-206ENST00000426658 ANKRD50Q9ULJ7 1429 aa13.25□□□□□ -0.29
CTCFL-206ENST00000426658 WASHC2CQ9Y4E1 1318 aa13.24□□□□□ -0.29
CTCFL-206ENST00000426658 JPH4Q96JJ6 628 aa13.24□□□□□ -0.29
CTCFL-206ENST00000426658 BECN1Q14457 450 aa13.24□□□□□ -0.29
CTCFL-206ENST00000426658 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
CTCFL-206ENST00000426658 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
CTCFL-206ENST00000426658 UPF2Q9HAU5 1272 aaKnown RBP13.22□□□□□ -0.29
CTCFL-206ENST00000426658 PZPP20742 1482 aa13.22□□□□□ -0.29
CTCFL-206ENST00000426658 GOLGA2Q08379 1002 aa13.22□□□□□ -0.29
CTCFL-206ENST00000426658 FRAT2O75474 233 aaPredicted RBP13.21□□□□□ -0.29
CTCFL-206ENST00000426658 NBPF1Q3BBV0 1214 aa13.21□□□□□ -0.29
CTCFL-206ENST00000426658 C20orf194Q5TEA3 1177 aa13.21□□□□□ -0.29
CTCFL-206ENST00000426658 SPRYD3Q8NCJ5 442 aa13.21□□□□□ -0.29
CTCFL-206ENST00000426658 ABCA5Q8WWZ7 1642 aa13.21□□□□□ -0.29
CTCFL-206ENST00000426658 GGT6Q6P531 493 aa13.21□□□□□ -0.29
CTCFL-206ENST00000426658 IQGAP2Q13576 1575 aa13.21□□□□□ -0.3
CTCFL-206ENST00000426658 C14orf37Q86TY3 774 aa13.2□□□□□ -0.3
CTCFL-206ENST00000426658 PRG4Q92954 1404 aaPredicted RBP13.2□□□□□ -0.3
CTCFL-206ENST00000426658 RALGAPBQ86X10 1494 aa13.19□□□□□ -0.3
CTCFL-206ENST00000426658 ADAMTS8Q9UP79 889 aa13.19□□□□□ -0.3
CTCFL-206ENST00000426658 LRRIQ1Q96JM4 1722 aa13.19□□□□□ -0.3
CTCFL-206ENST00000426658 SLKQ9H2G2 1235 aaPredicted RBP13.19□□□□□ -0.3
CTCFL-206ENST00000426658 CAMSAP2Q08AD1 1489 aa13.18□□□□□ -0.3
CTCFL-206ENST00000426658 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
CTCFL-206ENST00000426658 DNMT1P26358 1616 aaKnown RBP13.17□□□□□ -0.3
CTCFL-206ENST00000426658 CCDC144AA2RUR9 1427 aa13.16□□□□□ -0.3
CTCFL-206ENST00000426658 TROQ12816 1431 aaPredicted RBP13.16□□□□□ -0.3
CTCFL-206ENST00000426658 A0A0G2JS52 829 aa13.16□□□□□ -0.3
CTCFL-206ENST00000426658 PARD3Q8TEW0 1356 aa13.16□□□□□ -0.3
CTCFL-206ENST00000426658 WDR62O43379 1518 aa13.15□□□□□ -0.3
CTCFL-206ENST00000426658 BCORL1Q5H9F3 1711 aa13.15□□□□□ -0.3
CTCFL-206ENST00000426658 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.3
CTCFL-206ENST00000426658 KIF14Q15058 1648 aa13.15□□□□□ -0.3
CTCFL-206ENST00000426658 RSPH6AQ9H0K4 717 aa13.15□□□□□ -0.3
CTCFL-206ENST00000426658 HSP90AA1P07900 732 aaKnown RBP13.15□□□□□ -0.3
CTCFL-206ENST00000426658 CLUAP1Q96AJ1 413 aa13.14□□□□□ -0.31
CTCFL-206ENST00000426658 ZBTB7CA1YPR0 619 aa13.14□□□□□ -0.31
CTCFL-206ENST00000426658 CDCA8Q53HL2 280 aa13.14□□□□□ -0.31
CTCFL-206ENST00000426658 UHRF1BP1Q6BDS2 1440 aa13.14□□□□□ -0.31
CTCFL-206ENST00000426658 L1TD1Q5T7N2 865 aaKnown RBP13.14□□□□□ -0.31
CTCFL-206ENST00000426658 KDM5CP41229 1560 aa13.14□□□□□ -0.31
CTCFL-206ENST00000426658 RRP7AQ9Y3A4 280 aaKnown RBP13.13□□□□□ -0.31
CTCFL-206ENST00000426658 MBD5Q9P267 1494 aa13.13□□□□□ -0.31
CTCFL-206ENST00000426658 SAFB2Q14151 953 aaKnown RBP eCLIP13.13□□□□□ -0.31
CTCFL-206ENST00000426658 BCL2L13Q9BXK5 485 aa13.13□□□□□ -0.31
CTCFL-206ENST00000426658 APAF1O14727 1248 aa13.12□□□□□ -0.31
CTCFL-206ENST00000426658 C9orf84Q5VXU9 1444 aa13.12□□□□□ -0.31
CTCFL-206ENST00000426658 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-206ENST00000426658 C8orf34Q49A92 452 aa13.11□□□□□ -0.31
CTCFL-206ENST00000426658 FAM43AQ8N2R8 423 aa13.11□□□□□ -0.31
CTCFL-206ENST00000426658 CARMIL2Q6F5E8 1435 aa13.11□□□□□ -0.31
CTCFL-206ENST00000426658 POLR1AO95602 1720 aaPredicted RBP13.1□□□□□ -0.31
CTCFL-206ENST00000426658 NUP153P49790 1475 aaKnown RBP13.1□□□□□ -0.31
CTCFL-206ENST00000426658 PPP2R1AP30153 589 aa13.1□□□□□ -0.31
CTCFL-206ENST00000426658 GLIPR1L2Q4G1C9 344 aa13.1□□□□□ -0.31
CTCFL-206ENST00000426658 DUSP27Q5VZP5 1158 aa13.09□□□□□ -0.31
CTCFL-206ENST00000426658 PLEKHH2Q8IVE3 1493 aa13.09□□□□□ -0.31
CTCFL-206ENST00000426658 GPATCH8Q9UKJ3 1502 aaKnown RBP13.09□□□□□ -0.31
CTCFL-206ENST00000426658 FTSJ3Q8IY81 847 aaKnown RBP13.09□□□□□ -0.31
CTCFL-206ENST00000426658 KDM2BQ8NHM5 1336 aa13.09□□□□□ -0.31
CTCFL-206ENST00000426658 GZF1Q9H116 711 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-206ENST00000426658 U2SURPO15042 1029 aaKnown RBP13.08□□□□□ -0.32
CTCFL-206ENST00000426658 NAP1L5Q96NT1 182 aaPredicted RBP13.08□□□□□ -0.32
CTCFL-206ENST00000426658 ARHGEF12Q9NZN5 1544 aa13.08□□□□□ -0.32
CTCFL-206ENST00000426658 MAPK8IP3Q9UPT6 1336 aa13.08□□□□□ -0.32
CTCFL-206ENST00000426658 COG6Q9Y2V7 657 aa13.08□□□□□ -0.32
CTCFL-206ENST00000426658 LMOD2Q6P5Q4 547 aa13.07□□□□□ -0.32
CTCFL-206ENST00000426658 ERBINQ96RT1 1412 aa13.07□□□□□ -0.32
CTCFL-206ENST00000426658 DISP3Q9P2K9 1392 aa13.07□□□□□ -0.32
CTCFL-206ENST00000426658 BCAR3O75815 825 aa13.06□□□□□ -0.32
CTCFL-206ENST00000426658 KIAA0586Q9BVV6 1533 aa13.06□□□□□ -0.32
CTCFL-206ENST00000426658 CGNL1Q0VF96 1302 aa13.06□□□□□ -0.32
CTCFL-206ENST00000426658 E9PSI1 815 aa13.06□□□□□ -0.32
CTCFL-206ENST00000426658 NUTM2DQ5VT03 806 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-206ENST00000426658 MORC1Q86VD1 984 aa13.06□□□□□ -0.32
CTCFL-206ENST00000426658 CENPJQ9HC77 1338 aaPredicted RBP13.06□□□□□ -0.32
CTCFL-206ENST00000426658 POGKQ9P215 609 aa13.06□□□□□ -0.32
CTCFL-206ENST00000426658 SLFN5Q08AF3 891 aa13.05□□□□□ -0.32
CTCFL-206ENST00000426658 EIF3AQ14152 1382 aaKnown RBP13.05□□□□□ -0.32
CTCFL-206ENST00000426658 GOLGA6L3A6NEY3 463 aa13.04□□□□□ -0.32
CTCFL-206ENST00000426658 ADGRL2O95490 1459 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms