RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 TNRQ92752 1358 aa23.58■■□□□ 1.37
PDAP1-202ENST00000426447 HSPA1LP34931 641 aa23.58■■□□□ 1.37
PDAP1-202ENST00000426447 MBD5Q9P267 1494 aa23.57■■□□□ 1.36
PDAP1-202ENST00000426447 ANKLE2Q86XL3 938 aa23.57■■□□□ 1.36
PDAP1-202ENST00000426447 DNMT1P26358 1616 aaKnown RBP23.56■■□□□ 1.36
PDAP1-202ENST00000426447 THEMISQ8N1K5 641 aaPredicted RBP23.55■■□□□ 1.36
PDAP1-202ENST00000426447 RSPH4AQ5TD94 716 aa23.53■■□□□ 1.36
PDAP1-202ENST00000426447 TIAM1Q13009 1591 aa23.52■■□□□ 1.36
PDAP1-202ENST00000426447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.52■■□□□ 1.362e-8■■■■□ 23.1
PDAP1-202ENST00000426447 SHANK2Q9UPX8 1470 aa23.51■■□□□ 1.35
PDAP1-202ENST00000426447 CPS1P31327 1500 aa23.5■■□□□ 1.35
PDAP1-202ENST00000426447 CEP162Q5TB80 1403 aa23.5■■□□□ 1.35
PDAP1-202ENST00000426447 EHBP1L1Q8N3D4 1523 aa23.49■■□□□ 1.35
PDAP1-202ENST00000426447 TSPY4P0CV99 314 aa23.48■■□□□ 1.35
PDAP1-202ENST00000426447 TSPY10P0CW01 314 aa23.48■■□□□ 1.35
PDAP1-202ENST00000426447 PZPP20742 1482 aa23.48■■□□□ 1.35
PDAP1-202ENST00000426447 MIA2Q96PC5 1412 aa23.47■■□□□ 1.35
PDAP1-202ENST00000426447 KDM5DQ9BY66 1539 aa23.47■■□□□ 1.35
PDAP1-202ENST00000426447 CCDC141Q6ZP82 1450 aa23.46■■□□□ 1.35
PDAP1-202ENST00000426447 PHF23Q9BUL5 403 aaPredicted RBP23.45■■□□□ 1.34
PDAP1-202ENST00000426447 NEURL4Q96JN8 1562 aa23.44■■□□□ 1.34
PDAP1-202ENST00000426447 POLR1AO95602 1720 aaPredicted RBP23.43■■□□□ 1.34
PDAP1-202ENST00000426447 FAM135AQ9P2D6 1515 aa23.43■■□□□ 1.34
PDAP1-202ENST00000426447 NPHP4O75161 1426 aaPredicted RBP23.42■■□□□ 1.34
PDAP1-202ENST00000426447 CAMSAP2Q08AD1 1489 aa23.42■■□□□ 1.34
PDAP1-202ENST00000426447 NLRP1Q9C000 1473 aa23.42■■□□□ 1.34
PDAP1-202ENST00000426447 MED1Q15648 1581 aaPredicted RBP23.41■■□□□ 1.34
PDAP1-202ENST00000426447 UGGT1Q9NYU2 1555 aa23.41■■□□□ 1.34
PDAP1-202ENST00000426447 SENP3Q9H4L4 574 aaPredicted RBP23.41■■□□□ 1.34
PDAP1-202ENST00000426447 NCOA2Q15596 1464 aa23.39■■□□□ 1.34
PDAP1-202ENST00000426447 MED14O60244 1454 aa23.36■■□□□ 1.33
PDAP1-202ENST00000426447 VWDEQ8N2E2 1590 aa23.36■■□□□ 1.33
PDAP1-202ENST00000426447 DEPDC5O75140 1603 aa23.32■■□□□ 1.32
PDAP1-202ENST00000426447 ARHGEF5Q12774 1597 aa23.29■■□□□ 1.32
PDAP1-202ENST00000426447 IQGAP1P46940 1657 aa23.28■■□□□ 1.32
PDAP1-202ENST00000426447 LRRC7Q96NW7 1537 aa23.27■■□□□ 1.32
PDAP1-202ENST00000426447 ABCC3O15438 1527 aa23.25■■□□□ 1.31
PDAP1-202ENST00000426447 TXNDC2Q86VQ3 553 aa23.25■■□□□ 1.31
PDAP1-202ENST00000426447 ALKQ9UM73 1620 aa23.24■■□□□ 1.31
PDAP1-202ENST00000426447 ERVK-7P63135 1459 aa23.24■■□□□ 1.31
PDAP1-202ENST00000426447 EID1Q9Y6B2 187 aa23.22■■□□□ 1.31
PDAP1-202ENST00000426447 RNF17Q9BXT8 1623 aaKnown RBP23.2■■□□□ 1.3
PDAP1-202ENST00000426447 LTKP29376 864 aa23.2■■□□□ 1.3
PDAP1-202ENST00000426447 ZC3H13Q5T200 1668 aaKnown RBP23.19■■□□□ 1.3
PDAP1-202ENST00000426447 LRRC9Q6ZRR7 1453 aa23.18■■□□□ 1.3
PDAP1-202ENST00000426447 SCAF11Q99590 1463 aaKnown RBP23.18■■□□□ 1.3
PDAP1-202ENST00000426447 STAG3Q9UJ98 1225 aa23.18■■□□□ 1.3
PDAP1-202ENST00000426447 STRCP1A6NGW2 1772 aa23.17■■□□□ 1.3
PDAP1-202ENST00000426447 MAST1Q9Y2H9 1570 aa23.17■■□□□ 1.3
PDAP1-202ENST00000426447 SYNMO15061 1565 aa23.16■■□□□ 1.3
PDAP1-202ENST00000426447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.16■■□□□ 1.35e-16■■■■□ 19.8
PDAP1-202ENST00000426447 KANK4Q5T7N3 995 aaPredicted RBP23.15■■□□□ 1.3
PDAP1-202ENST00000426447 EIF2AK4Q9P2K8 1649 aaKnown RBP23.15■■□□□ 1.3
PDAP1-202ENST00000426447 RRP7BPQ9NSQ0 103 aa23.13■■□□□ 1.29
PDAP1-202ENST00000426447 MYOM3Q5VTT5 1437 aa23.13■■□□□ 1.29
PDAP1-202ENST00000426447 DUOX2Q9NRD8 1548 aa23.12■■□□□ 1.29
PDAP1-202ENST00000426447 UBR1Q8IWV7 1749 aa23.11■■□□□ 1.29
PDAP1-202ENST00000426447 VPS8Q8N3P4 1428 aa23.11■■□□□ 1.29
PDAP1-202ENST00000426447 CFAP65Q6ZU64 1925 aaKnown RBP23.11■■□□□ 1.29
PDAP1-202ENST00000426447 RGS17Q9UGC6 210 aaPredicted RBP23.1■■□□□ 1.29
PDAP1-202ENST00000426447 MROH1Q8NDA8 1641 aa23.1■■□□□ 1.29
PDAP1-202ENST00000426447 CEP152O94986 1710 aa23.1■■□□□ 1.29
PDAP1-202ENST00000426447 KIF15Q9NS87 1388 aa23.09■■□□□ 1.29
PDAP1-202ENST00000426447 ARHGAP23Q9P227 1491 aa23.09■■□□□ 1.29
PDAP1-202ENST00000426447 ARHGAP31Q2M1Z3 1444 aa23.08■■□□□ 1.29
PDAP1-202ENST00000426447 SLIT1O75093 1534 aa23.08■■□□□ 1.29
PDAP1-202ENST00000426447 KANK1Q14678 1352 aa23.07■■□□□ 1.28
PDAP1-202ENST00000426447 TMEM2Q9UHN6 1383 aa23.06■■□□□ 1.28
PDAP1-202ENST00000426447 LOC105371045A0A1W2PR82 267 aa23.06■■□□□ 1.28
PDAP1-202ENST00000426447 PROSER2Q86WR7 435 aaPredicted RBP23.05■■□□□ 1.28
PDAP1-202ENST00000426447 FAM135BQ49AJ0 1406 aa23.05■■□□□ 1.28
PDAP1-202ENST00000426447 KCNA6P17658 529 aa23.04■■□□□ 1.28
PDAP1-202ENST00000426447 SLC26A8Q96RN1 970 aa23.04■■□□□ 1.28
PDAP1-202ENST00000426447 TMEM94Q12767 1356 aa23.03■■□□□ 1.28
PDAP1-202ENST00000426447 ERBINQ96RT1 1412 aa23.03■■□□□ 1.28
PDAP1-202ENST00000426447 IDI1Q13907 227 aa23.03■■□□□ 1.28
PDAP1-202ENST00000426447 BCANQ96GW7 911 aa23.03■■□□□ 1.28
PDAP1-202ENST00000426447 APLP2Q06481 763 aa23.01■■□□□ 1.27
PDAP1-202ENST00000426447 RBM33Q96EV2 1170 aaKnown RBP23.01■■□□□ 1.27
PDAP1-202ENST00000426447 MAP3K1Q13233 1512 aa23■■□□□ 1.27
PDAP1-202ENST00000426447 ABCC5O15440 1437 aa22.99■■□□□ 1.27
PDAP1-202ENST00000426447 PRDM15P57071 1507 aaPredicted RBP22.99■■□□□ 1.27
PDAP1-202ENST00000426447 POTEAQ6S8J7 498 aa22.99■■□□□ 1.27
PDAP1-202ENST00000426447 CHIC2Q9UKJ5 165 aa22.99■■□□□ 1.27
PDAP1-202ENST00000426447 PIK3C2BO00750 1634 aa22.98■■□□□ 1.27
PDAP1-202ENST00000426447 EFCAB6Q5THR3 1501 aa22.96■■□□□ 1.27
PDAP1-202ENST00000426447 XIRP1Q702N8 1843 aaKnown RBP22.96■■□□□ 1.27
PDAP1-202ENST00000426447 DAPK1P53355 1430 aa22.93■■□□□ 1.26
PDAP1-202ENST00000426447 ANKRD30AQ9BXX3 1397 aa22.93■■□□□ 1.26
PDAP1-202ENST00000426447 SLC52A1Q9NWF4 448 aa22.92■■□□□ 1.26
PDAP1-202ENST00000426447 MSH6P52701 1360 aa22.91■■□□□ 1.26
PDAP1-202ENST00000426447 SLAIN2Q9P270 581 aa22.91■■□□□ 1.26
PDAP1-202ENST00000426447 PTPN23Q9H3S7 1636 aa22.9■■□□□ 1.26
PDAP1-202ENST00000426447 ROBO1Q9Y6N7 1651 aa22.88■■□□□ 1.25
PDAP1-202ENST00000426447 HDGFP51858 240 aaKnown RBP22.88■■□□□ 1.25
PDAP1-202ENST00000426447 CROCC2H7BZ55 1655 aa22.87■■□□□ 1.25
PDAP1-202ENST00000426447 TET3O43151 1660 aa22.87■■□□□ 1.25
PDAP1-202ENST00000426447 PPP1R15AO75807 674 aaPredicted RBP22.87■■□□□ 1.25
PDAP1-202ENST00000426447 LMTK2Q8IWU2 1503 aa22.87■■□□□ 1.25
PDAP1-202ENST00000426447 KDM5AP29375 1690 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms