RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 EIF2AK4Q9P2K8 1649 aaKnown RBP21.14■□□□□ 0.97
SNX3-204ENST00000426155 KIF3BO15066 747 aa21.12■□□□□ 0.97
SNX3-204ENST00000426155 DUOX2Q9NRD8 1548 aa21.11■□□□□ 0.97
SNX3-204ENST00000426155 FAM50AQ14320 339 aaKnown RBP21.11■□□□□ 0.97
SNX3-204ENST00000426155 MROH1Q8NDA8 1641 aa21.1■□□□□ 0.97
SNX3-204ENST00000426155 KDM5DQ9BY66 1539 aa21.09■□□□□ 0.97
SNX3-204ENST00000426155 HSPA2P54652 639 aa21.09■□□□□ 0.97
SNX3-204ENST00000426155 KIF15Q9NS87 1388 aa21.09■□□□□ 0.97
SNX3-204ENST00000426155 CEP152O94986 1710 aa21.08■□□□□ 0.97
SNX3-204ENST00000426155 CHIC2Q9UKJ5 165 aa21.08■□□□□ 0.97
SNX3-204ENST00000426155 SETD1BQ9UPS6 1966 aaKnown RBP21.08■□□□□ 0.96
SNX3-204ENST00000426155 ZMYM3Q14202 1370 aa21.08■□□□□ 0.96
SNX3-204ENST00000426155 MYO3AQ8NEV4 1616 aa21.05■□□□□ 0.96
SNX3-204ENST00000426155 RRP7BPQ9NSQ0 103 aa21.05■□□□□ 0.96
SNX3-204ENST00000426155 ZC3H13Q5T200 1668 aaKnown RBP21.05■□□□□ 0.96
SNX3-204ENST00000426155 FAM135AQ9P2D6 1515 aa21.04■□□□□ 0.96
SNX3-204ENST00000426155 UHRF1BP1Q6BDS2 1440 aa21.04■□□□□ 0.96
SNX3-204ENST00000426155 ADGRL2O95490 1459 aa21.03■□□□□ 0.96
SNX3-204ENST00000426155 PTPRKQ15262 1439 aa21.03■□□□□ 0.96
SNX3-204ENST00000426155 ERBINQ96RT1 1412 aa21.03■□□□□ 0.96
SNX3-204ENST00000426155 DEPDC5O75140 1603 aa21.02■□□□□ 0.96
SNX3-204ENST00000426155 ABCC3O15438 1527 aa21.02■□□□□ 0.96
SNX3-204ENST00000426155 PRDM15P57071 1507 aaPredicted RBP21.01■□□□□ 0.95
SNX3-204ENST00000426155 POTEDQ86YR6 584 aa21.01■□□□□ 0.95
SNX3-204ENST00000426155 NPATQ14207 1427 aa21.01■□□□□ 0.95
SNX3-204ENST00000426155 NCOA1Q15788 1441 aa21.01■□□□□ 0.95
SNX3-204ENST00000426155 CAMSAP1Q5T5Y3 1602 aa21■□□□□ 0.95
SNX3-204ENST00000426155 ANKRD30AQ9BXX3 1397 aa21■□□□□ 0.95
SNX3-204ENST00000426155 ZNF142P52746 1687 aaPredicted RBP21■□□□□ 0.95
SNX3-204ENST00000426155 STRCQ7RTU9 1775 aa20.99■□□□□ 0.95
SNX3-204ENST00000426155 WASHC2CQ9Y4E1 1318 aa20.99■□□□□ 0.95
SNX3-204ENST00000426155 PZPP20742 1482 aa20.97■□□□□ 0.95
SNX3-204ENST00000426155 CFAP65Q6ZU64 1925 aaKnown RBP20.96■□□□□ 0.95
SNX3-204ENST00000426155 CEP170BQ9Y4F5 1589 aaPredicted RBP20.95■□□□□ 0.94
SNX3-204ENST00000426155 ITGAEP38570 1179 aa20.93■□□□□ 0.94
SNX3-204ENST00000426155 FBXO31Q5XUX0 539 aaPredicted RBP20.93■□□□□ 0.94
SNX3-204ENST00000426155 RRBP1Q9P2E9 1410 aaKnown RBP20.92■□□□□ 0.94
SNX3-204ENST00000426155 VWDEQ8N2E2 1590 aa20.89■□□□□ 0.94
SNX3-204ENST00000426155 ANKRD50Q9ULJ7 1429 aa20.89■□□□□ 0.94
SNX3-204ENST00000426155 TNRQ92752 1358 aa20.89■□□□□ 0.93
SNX3-204ENST00000426155 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.89■□□□□ 0.93
SNX3-204ENST00000426155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.89■□□□□ 0.93
SNX3-204ENST00000426155 SPATA31D1Q6ZQQ2 1576 aa20.88■□□□□ 0.93
SNX3-204ENST00000426155 ERVK-7P63135 1459 aa20.87■□□□□ 0.93
SNX3-204ENST00000426155 UNC13BO14795 1591 aa20.86■□□□□ 0.93
SNX3-204ENST00000426155 A2ML1A8K2U0 1454 aa20.86■□□□□ 0.93
SNX3-204ENST00000426155 ROCK1Q13464 1354 aa20.85■□□□□ 0.93
SNX3-204ENST00000426155 LMTK2Q8IWU2 1503 aa20.83■□□□□ 0.93
SNX3-204ENST00000426155 EFCAB6Q5THR3 1501 aa20.83■□□□□ 0.92
SNX3-204ENST00000426155 KANK1Q14678 1352 aa20.82■□□□□ 0.92
SNX3-204ENST00000426155 GCC2Q8IWJ2 1684 aa20.81■□□□□ 0.92
SNX3-204ENST00000426155 POLR1AO95602 1720 aaPredicted RBP20.81■□□□□ 0.92
SNX3-204ENST00000426155 ARHGAP31Q2M1Z3 1444 aa20.8■□□□□ 0.92
SNX3-204ENST00000426155 TET3O43151 1660 aa20.8■□□□□ 0.92
SNX3-204ENST00000426155 NLRP1Q9C000 1473 aa20.79■□□□□ 0.92
SNX3-204ENST00000426155 UGGT1Q9NYU2 1555 aa20.78■□□□□ 0.92
SNX3-204ENST00000426155 PLA2R1Q13018 1463 aa20.78■□□□□ 0.92
SNX3-204ENST00000426155 UBR1Q8IWV7 1749 aa20.78■□□□□ 0.92
SNX3-204ENST00000426155 IQGAP3Q86VI3 1631 aa20.77■□□□□ 0.92
SNX3-204ENST00000426155 NCKAP5LQ9HCH0 1330 aa20.77■□□□□ 0.91
SNX3-204ENST00000426155 SYNMO15061 1565 aa20.76■□□□□ 0.91
SNX3-204ENST00000426155 PIK3C2BO00750 1634 aa20.75■□□□□ 0.91
SNX3-204ENST00000426155 E9PCH4 1651 aa20.75■□□□□ 0.91
SNX3-204ENST00000426155 NEURL4Q96JN8 1562 aa20.75■□□□□ 0.91
SNX3-204ENST00000426155 PTPRTO14522 1441 aa20.72■□□□□ 0.91
SNX3-204ENST00000426155 NAIPQ13075 1403 aa20.71■□□□□ 0.91
SNX3-204ENST00000426155 DMRT2Q9Y5R5 561 aa20.69■□□□□ 0.9
SNX3-204ENST00000426155 MYO5BQ9ULV0 1848 aa20.68■□□□□ 0.9
SNX3-204ENST00000426155 NOS1P29475 1434 aa20.68■□□□□ 0.9
SNX3-204ENST00000426155 RPRD2Q5VT52 1461 aaKnown RBP20.67■□□□□ 0.9
SNX3-204ENST00000426155 NUP155O75694 1391 aa20.66■□□□□ 0.9
SNX3-204ENST00000426155 HFM1A2PYH4 1435 aa20.65■□□□□ 0.9
SNX3-204ENST00000426155 PKD2Q13563 968 aa20.65■□□□□ 0.9
SNX3-204ENST00000426155 KDM5AP29375 1690 aaKnown RBP20.64■□□□□ 0.9
SNX3-204ENST00000426155 IQGAP1P46940 1657 aa20.64■□□□□ 0.9
SNX3-204ENST00000426155 LTBP4Q8N2S1 1624 aa20.64■□□□□ 0.89
SNX3-204ENST00000426155 ADGRB3O60242 1522 aa20.63■□□□□ 0.89
SNX3-204ENST00000426155 THEMISQ8N1K5 641 aaPredicted RBP20.63■□□□□ 0.89
SNX3-204ENST00000426155 SPHKAPQ2M3C7 1700 aa20.61■□□□□ 0.89
SNX3-204ENST00000426155 ILDR1Q86SU0 546 aaPredicted RBP20.61■□□□□ 0.89
SNX3-204ENST00000426155 SLIT1O75093 1534 aa20.6■□□□□ 0.89
SNX3-204ENST00000426155 IDI1Q13907 227 aa20.6■□□□□ 0.89
SNX3-204ENST00000426155 ARHGAP23Q9P227 1491 aa20.6■□□□□ 0.89
SNX3-204ENST00000426155 ZNF335Q9H4Z2 1342 aaPredicted RBP20.58■□□□□ 0.89
SNX3-204ENST00000426155 MED14O60244 1454 aa20.58■□□□□ 0.89
SNX3-204ENST00000426155 ANKLE2Q86XL3 938 aa20.58■□□□□ 0.89
SNX3-204ENST00000426155 NPHP4O75161 1426 aaPredicted RBP20.58■□□□□ 0.88
SNX3-204ENST00000426155 CERKQ8TCT0 537 aa20.57■□□□□ 0.88
SNX3-204ENST00000426155 TMEM131LA2VDJ0 1609 aa20.56■□□□□ 0.88
SNX3-204ENST00000426155 SCAF11Q99590 1463 aaKnown RBP20.56■□□□□ 0.88
SNX3-204ENST00000426155 STAG3Q9UJ98 1225 aa20.54■□□□□ 0.88
SNX3-204ENST00000426155 STRCP1A6NGW2 1772 aa20.54■□□□□ 0.88
SNX3-204ENST00000426155 LTKP29376 864 aa20.53■□□□□ 0.88
SNX3-204ENST00000426155 TMEM2Q9UHN6 1383 aa20.53■□□□□ 0.88
SNX3-204ENST00000426155 SLC52A1Q9NWF4 448 aa20.52■□□□□ 0.88
SNX3-204ENST00000426155 CLTCL1P53675 1640 aa20.5■□□□□ 0.87
SNX3-204ENST00000426155 FBXO41Q8TF61 875 aa20.5■□□□□ 0.87
SNX3-204ENST00000426155 TRIM52Q96A61 297 aa20.5■□□□□ 0.87
SNX3-204ENST00000426155 TXNDC2Q86VQ3 553 aa20.49■□□□□ 0.87
SNX3-204ENST00000426155 TRPM2O94759 1503 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms