RNA–Protein interactions for RNA: ENST00000425441.5

CCDC12-202, Transcript of coiled-coil domain containing 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC12, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-202ENST00000425441 PTPRKQ15262 1439 aa20.95■□□□□ 0.95
CCDC12-202ENST00000425441 IQSEC2Q5JU85 1478 aa20.95■□□□□ 0.94
CCDC12-202ENST00000425441 RSPH4AQ5TD94 716 aa20.95■□□□□ 0.94
CCDC12-202ENST00000425441 NCOA2Q15596 1464 aa20.94■□□□□ 0.94
CCDC12-202ENST00000425441 CCDC141Q6ZP82 1450 aa20.94■□□□□ 0.94
CCDC12-202ENST00000425441 CEP170BQ9Y4F5 1589 aaPredicted RBP20.94■□□□□ 0.94
CCDC12-202ENST00000425441 LTBP4Q8N2S1 1624 aa20.94■□□□□ 0.94
CCDC12-202ENST00000425441 DHX29Q7Z478 1369 aaKnown RBP20.94■□□□□ 0.94
CCDC12-202ENST00000425441 PLA2R1Q13018 1463 aa20.94■□□□□ 0.94
CCDC12-202ENST00000425441 CAMSAP2Q08AD1 1489 aa20.92■□□□□ 0.94
CCDC12-202ENST00000425441 FAM135AQ9P2D6 1515 aa20.92■□□□□ 0.94
CCDC12-202ENST00000425441 PKD2Q13563 968 aa20.91■□□□□ 0.94
CCDC12-202ENST00000425441 ARHGEF5Q12774 1597 aa20.88■□□□□ 0.93
CCDC12-202ENST00000425441 NCKAP5LQ9HCH0 1330 aa20.87■□□□□ 0.93
CCDC12-202ENST00000425441 TCOF1Q13428 1488 aaKnown RBP20.87■□□□□ 0.93
CCDC12-202ENST00000425441 KIF3BO15066 747 aa20.86■□□□□ 0.93
CCDC12-202ENST00000425441 KDM5DQ9BY66 1539 aa20.86■□□□□ 0.93
CCDC12-202ENST00000425441 A2ML1A8K2U0 1454 aa20.86■□□□□ 0.93
CCDC12-202ENST00000425441 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
CCDC12-202ENST00000425441 NPM3O75607 178 aaKnown RBP20.84■□□□□ 0.93
CCDC12-202ENST00000425441 TSPY4P0CV99 314 aa20.84■□□□□ 0.93
CCDC12-202ENST00000425441 TSPY10P0CW01 314 aa20.84■□□□□ 0.93
CCDC12-202ENST00000425441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.84■□□□□ 0.938e-7■■■■□ 19.5
CCDC12-202ENST00000425441 DNMT1P26358 1616 aaKnown RBP20.82■□□□□ 0.92
CCDC12-202ENST00000425441 PZPP20742 1482 aa20.82■□□□□ 0.92
CCDC12-202ENST00000425441 LRRC9Q6ZRR7 1453 aa20.82■□□□□ 0.92
CCDC12-202ENST00000425441 TNRQ92752 1358 aa20.81■□□□□ 0.92
CCDC12-202ENST00000425441 WASHC2CQ9Y4E1 1318 aa20.8■□□□□ 0.92
CCDC12-202ENST00000425441 ZNF335Q9H4Z2 1342 aaPredicted RBP20.79■□□□□ 0.92
CCDC12-202ENST00000425441 MAP3K1Q13233 1512 aa20.79■□□□□ 0.92
CCDC12-202ENST00000425441 MAST1Q9Y2H9 1570 aa20.79■□□□□ 0.92
CCDC12-202ENST00000425441 POLR1AO95602 1720 aaPredicted RBP20.78■□□□□ 0.92
CCDC12-202ENST00000425441 DISP3Q9P2K9 1392 aa20.77■□□□□ 0.92
CCDC12-202ENST00000425441 ZC3H13Q5T200 1668 aaKnown RBP20.75■□□□□ 0.91
CCDC12-202ENST00000425441 LOC105371045A0A1W2PR82 267 aa20.75■□□□□ 0.91
CCDC12-202ENST00000425441 NLRP1Q9C000 1473 aa20.75■□□□□ 0.91
CCDC12-202ENST00000425441 EIF2AK4Q9P2K8 1649 aaKnown RBP20.75■□□□□ 0.91
CCDC12-202ENST00000425441 FBXO31Q5XUX0 539 aaPredicted RBP20.74■□□□□ 0.91
CCDC12-202ENST00000425441 MIA2Q96PC5 1412 aa20.74■□□□□ 0.91
CCDC12-202ENST00000425441 RNF17Q9BXT8 1623 aaKnown RBP20.74■□□□□ 0.91
CCDC12-202ENST00000425441 SPATA31D1Q6ZQQ2 1576 aa20.72■□□□□ 0.91
CCDC12-202ENST00000425441 MYOM3Q5VTT5 1437 aa20.71■□□□□ 0.91
CCDC12-202ENST00000425441 UBAP1LF5GYI3 381 aa20.71■□□□□ 0.91
CCDC12-202ENST00000425441 THEMISQ8N1K5 641 aaPredicted RBP20.71■□□□□ 0.91
CCDC12-202ENST00000425441 NEURL4Q96JN8 1562 aa20.7■□□□□ 0.9
CCDC12-202ENST00000425441 UGGT1Q9NYU2 1555 aa20.7■□□□□ 0.9
CCDC12-202ENST00000425441 CPS1P31327 1500 aa20.69■□□□□ 0.9
CCDC12-202ENST00000425441 ANKLE2Q86XL3 938 aa20.69■□□□□ 0.9
CCDC12-202ENST00000425441 ABCC3O15438 1527 aa20.68■□□□□ 0.9
CCDC12-202ENST00000425441 KANK4Q5T7N3 995 aaPredicted RBP20.67■□□□□ 0.9
CCDC12-202ENST00000425441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.66■□□□□ 0.9
CCDC12-202ENST00000425441 DEPDC5O75140 1603 aa20.66■□□□□ 0.9
CCDC12-202ENST00000425441 DUOX2Q9NRD8 1548 aa20.65■□□□□ 0.9
CCDC12-202ENST00000425441 SHANK2Q9UPX8 1470 aa20.64■□□□□ 0.89
CCDC12-202ENST00000425441 APLP2Q06481 763 aa20.64■□□□□ 0.89
CCDC12-202ENST00000425441 MED14O60244 1454 aa20.63■□□□□ 0.89
CCDC12-202ENST00000425441 MROH1Q8NDA8 1641 aa20.63■□□□□ 0.89
CCDC12-202ENST00000425441 NPHP4O75161 1426 aaPredicted RBP20.62■□□□□ 0.89
CCDC12-202ENST00000425441 CEP152O94986 1710 aa20.62■□□□□ 0.89
CCDC12-202ENST00000425441 ERVK-7P63135 1459 aa20.62■□□□□ 0.89
CCDC12-202ENST00000425441 CROCC2H7BZ55 1655 aa20.61■□□□□ 0.89
CCDC12-202ENST00000425441 ILDR2Q71H61 639 aa20.6■□□□□ 0.89
CCDC12-202ENST00000425441 IQGAP1P46940 1657 aa20.6■□□□□ 0.89
CCDC12-202ENST00000425441 TOM1O60784 492 aa20.59■□□□□ 0.89
CCDC12-202ENST00000425441 PTPN23Q9H3S7 1636 aa20.59■□□□□ 0.89
CCDC12-202ENST00000425441 VWDEQ8N2E2 1590 aa20.59■□□□□ 0.89
CCDC12-202ENST00000425441 ERBINQ96RT1 1412 aa20.58■□□□□ 0.88
CCDC12-202ENST00000425441 SOCS7O14512 581 aa20.57■□□□□ 0.88
CCDC12-202ENST00000425441 PRDM15P57071 1507 aaPredicted RBP20.57■□□□□ 0.88
CCDC12-202ENST00000425441 KIF15Q9NS87 1388 aa20.57■□□□□ 0.88
CCDC12-202ENST00000425441 UBR1Q8IWV7 1749 aa20.55■□□□□ 0.88
CCDC12-202ENST00000425441 ABCC5O15440 1437 aa20.54■□□□□ 0.88
CCDC12-202ENST00000425441 ARHGAP31Q2M1Z3 1444 aa20.54■□□□□ 0.88
CCDC12-202ENST00000425441 DAPK1P53355 1430 aa20.53■□□□□ 0.88
CCDC12-202ENST00000425441 KANK1Q14678 1352 aa20.52■□□□□ 0.88
CCDC12-202ENST00000425441 SYNMO15061 1565 aa20.51■□□□□ 0.87
CCDC12-202ENST00000425441 CFAP65Q6ZU64 1925 aaKnown RBP20.51■□□□□ 0.87
CCDC12-202ENST00000425441 PIP4K2BP78356 416 aa20.51■□□□□ 0.87
CCDC12-202ENST00000425441 FGD6Q6ZV73 1430 aa20.51■□□□□ 0.87
CCDC12-202ENST00000425441 RRP7BPQ9NSQ0 103 aa20.5■□□□□ 0.87
CCDC12-202ENST00000425441 SCAF11Q99590 1463 aaKnown RBP20.49■□□□□ 0.87
CCDC12-202ENST00000425441 SLIT1O75093 1534 aa20.48■□□□□ 0.87
CCDC12-202ENST00000425441 ANKRD30AQ9BXX3 1397 aa20.47■□□□□ 0.87
CCDC12-202ENST00000425441 HSPA1LP34931 641 aa20.47■□□□□ 0.87
CCDC12-202ENST00000425441 ARHGAP23Q9P227 1491 aa20.47■□□□□ 0.87
CCDC12-202ENST00000425441 STRCP1A6NGW2 1772 aa20.45■□□□□ 0.86
CCDC12-202ENST00000425441 LRRC7Q96NW7 1537 aa20.45■□□□□ 0.86
CCDC12-202ENST00000425441 LMTK2Q8IWU2 1503 aa20.44■□□□□ 0.86
CCDC12-202ENST00000425441 TXNDC2Q86VQ3 553 aa20.44■□□□□ 0.86
CCDC12-202ENST00000425441 EID1Q9Y6B2 187 aa20.44■□□□□ 0.86
CCDC12-202ENST00000425441 PIK3C2BO00750 1634 aa20.44■□□□□ 0.86
CCDC12-202ENST00000425441 KDM5AP29375 1690 aaKnown RBP20.43■□□□□ 0.86
CCDC12-202ENST00000425441 STAG3Q9UJ98 1225 aa20.42■□□□□ 0.86
CCDC12-202ENST00000425441 MED1Q15648 1581 aaPredicted RBP20.42■□□□□ 0.86
CCDC12-202ENST00000425441 ALKQ9UM73 1620 aa20.41■□□□□ 0.86
CCDC12-202ENST00000425441 CHIC2Q9UKJ5 165 aa20.4■□□□□ 0.86
CCDC12-202ENST00000425441 ADGRL2O95490 1459 aa20.39■□□□□ 0.85
CCDC12-202ENST00000425441 LTKP29376 864 aa20.39■□□□□ 0.85
CCDC12-202ENST00000425441 EFCAB6Q5THR3 1501 aa20.38■□□□□ 0.85
CCDC12-202ENST00000425441 TMEM2Q9UHN6 1383 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms