RNA–Protein interactions for RNA: ENST00000425424.3

SAPCD1-209, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SAPCD1, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-209ENST00000425424 MROH1Q8NDA8 1641 aa24.68■■□□□ 1.54
SAPCD1-209ENST00000425424 HRCP23327 699 aa24.66■■□□□ 1.54
SAPCD1-209ENST00000425424 KDM5DQ9BY66 1539 aa24.64■■□□□ 1.53
SAPCD1-209ENST00000425424 RAB3GAP2Q9H2M9 1393 aa24.64■■□□□ 1.53
SAPCD1-209ENST00000425424 VWDEQ8N2E2 1590 aa24.63■■□□□ 1.53
SAPCD1-209ENST00000425424 ZC3H13Q5T200 1668 aaKnown RBP24.62■■□□□ 1.53
SAPCD1-209ENST00000425424 KIF3BO15066 747 aa24.62■■□□□ 1.53
SAPCD1-209ENST00000425424 PPP6R1Q9UPN7 881 aa24.62■■□□□ 1.53
SAPCD1-209ENST00000425424 PCGF6Q9BYE7 350 aa24.6■■□□□ 1.53
SAPCD1-209ENST00000425424 IQGAP3Q86VI3 1631 aa24.6■■□□□ 1.53
SAPCD1-209ENST00000425424 LMTK2Q8IWU2 1503 aa24.57■■□□□ 1.52
SAPCD1-209ENST00000425424 ARID4BQ4LE39 1312 aaPredicted RBP24.57■■□□□ 1.52
SAPCD1-209ENST00000425424 ADAMTSL3P82987 1691 aa24.56■■□□□ 1.52
SAPCD1-209ENST00000425424 KANK1Q14678 1352 aa24.55■■□□□ 1.52
SAPCD1-209ENST00000425424 ABCC3O15438 1527 aa24.54■■□□□ 1.52
SAPCD1-209ENST00000425424 CNTLNQ9NXG0 1405 aa24.53■■□□□ 1.52
SAPCD1-209ENST00000425424 MROH2AA6NES4 1674 aa24.53■■□□□ 1.52
SAPCD1-209ENST00000425424 GGT6Q6P531 493 aa24.51■■□□□ 1.51
SAPCD1-209ENST00000425424 FER1L4A9Z1Z3 1794 aa24.51■■□□□ 1.51
SAPCD1-209ENST00000425424 TET3O43151 1660 aa24.5■■□□□ 1.51
SAPCD1-209ENST00000425424 NUP155O75694 1391 aa24.5■■□□□ 1.51
SAPCD1-209ENST00000425424 PZPP20742 1482 aa24.49■■□□□ 1.51
SAPCD1-209ENST00000425424 CEP152O94986 1710 aa24.49■■□□□ 1.51
SAPCD1-209ENST00000425424 CAMSAP1Q5T5Y3 1602 aa24.48■■□□□ 1.51
SAPCD1-209ENST00000425424 MADDQ8WXG6 1647 aa24.47■■□□□ 1.51
SAPCD1-209ENST00000425424 EFCAB6Q5THR3 1501 aa24.47■■□□□ 1.51
SAPCD1-209ENST00000425424 CLTCQ00610 1675 aaKnown RBP24.46■■□□□ 1.51
SAPCD1-209ENST00000425424 ARHGAP31Q2M1Z3 1444 aa24.45■■□□□ 1.51
SAPCD1-209ENST00000425424 RPRD2Q5VT52 1461 aaKnown RBP24.45■■□□□ 1.5
SAPCD1-209ENST00000425424 WASHC2CQ9Y4E1 1318 aa24.44■■□□□ 1.5
SAPCD1-209ENST00000425424 MLECQ14165 292 aa24.44■■□□□ 1.5
SAPCD1-209ENST00000425424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.43■■□□□ 1.52e-6■□□□□ 10.9
SAPCD1-209ENST00000425424 TRIM52Q96A61 297 aa24.41■■□□□ 1.5
SAPCD1-209ENST00000425424 ESF1Q9H501 851 aaKnown RBP24.4■■□□□ 1.5
SAPCD1-209ENST00000425424 RIMS1Q86UR5 1692 aaKnown RBP24.4■■□□□ 1.5
SAPCD1-209ENST00000425424 E9PCH4 1651 aa24.38■■□□□ 1.49
SAPCD1-209ENST00000425424 NPATQ14207 1427 aa24.37■■□□□ 1.49
SAPCD1-209ENST00000425424 C3P01024 1663 aa24.36■■□□□ 1.49
SAPCD1-209ENST00000425424 ZMYM3Q14202 1370 aa24.35■■□□□ 1.49
SAPCD1-209ENST00000425424 MPHOSPH9Q99550 1183 aa24.35■■□□□ 1.49
SAPCD1-209ENST00000425424 SLC4A1APQ9BWU0 796 aaKnown RBP24.35■■□□□ 1.49
SAPCD1-209ENST00000425424 SPATA31D1Q6ZQQ2 1576 aa24.33■■□□□ 1.48
SAPCD1-209ENST00000425424 PTPRMP28827 1452 aa24.32■■□□□ 1.48
SAPCD1-209ENST00000425424 PREX1Q8TCU6 1659 aa24.31■■□□□ 1.48
SAPCD1-209ENST00000425424 DHX57Q6P158 1386 aaKnown RBP24.3■■□□□ 1.48
SAPCD1-209ENST00000425424 NOS1P29475 1434 aa24.29■■□□□ 1.48
SAPCD1-209ENST00000425424 KDM4FA0A1W2PPD8 638 aa24.29■■□□□ 1.48
SAPCD1-209ENST00000425424 ERVK-7P63135 1459 aa24.29■■□□□ 1.48
SAPCD1-209ENST00000425424 SPHKAPQ2M3C7 1700 aa24.29■■□□□ 1.48
SAPCD1-209ENST00000425424 PTPRTO14522 1441 aa24.28■■□□□ 1.48
SAPCD1-209ENST00000425424 PKD2Q13563 968 aa24.28■■□□□ 1.48
SAPCD1-209ENST00000425424 TRPM2O94759 1503 aa24.27■■□□□ 1.48
SAPCD1-209ENST00000425424 SYNMO15061 1565 aa24.23■■□□□ 1.47
SAPCD1-209ENST00000425424 PIK3C2BO00750 1634 aa24.21■■□□□ 1.47
SAPCD1-209ENST00000425424 PLA2R1Q13018 1463 aa24.2■■□□□ 1.47
SAPCD1-209ENST00000425424 ANKRD30BQ9BXX2 1392 aa24.19■■□□□ 1.46
SAPCD1-209ENST00000425424 CLSPNQ9HAW4 1339 aa24.18■■□□□ 1.46
SAPCD1-209ENST00000425424 NLRP1Q9C000 1473 aa24.18■■□□□ 1.46
SAPCD1-209ENST00000425424 TNRQ92752 1358 aa24.17■■□□□ 1.46
SAPCD1-209ENST00000425424 MYO3AQ8NEV4 1616 aa24.16■■□□□ 1.46
SAPCD1-209ENST00000425424 KDM5AP29375 1690 aaKnown RBP24.15■■□□□ 1.46
SAPCD1-209ENST00000425424 CEBPAP49715 358 aaPredicted RBP24.15■■□□□ 1.46
SAPCD1-209ENST00000425424 FBXO31Q5XUX0 539 aaPredicted RBP24.15■■□□□ 1.46
SAPCD1-209ENST00000425424 CLTCL1P53675 1640 aa24.14■■□□□ 1.46
SAPCD1-209ENST00000425424 NEURL4Q96JN8 1562 aa24.14■■□□□ 1.45
SAPCD1-209ENST00000425424 ZNF142P52746 1687 aaPredicted RBP24.14■■□□□ 1.45
SAPCD1-209ENST00000425424 CCDC144AA2RUR9 1427 aa24.13■■□□□ 1.45
SAPCD1-209ENST00000425424 FOXD1Q16676 465 aa24.13■■□□□ 1.45
SAPCD1-209ENST00000425424 SLC52A1Q9NWF4 448 aa24.13■■□□□ 1.45
SAPCD1-209ENST00000425424 SETD1BQ9UPS6 1966 aaKnown RBP24.11■■□□□ 1.45
SAPCD1-209ENST00000425424 CFAP65Q6ZU64 1925 aaKnown RBP24.1■■□□□ 1.45
SAPCD1-209ENST00000425424 UGGT1Q9NYU2 1555 aa24.09■■□□□ 1.45
SAPCD1-209ENST00000425424 ADGRB3O60242 1522 aa24.08■■□□□ 1.45
SAPCD1-209ENST00000425424 CEP170BQ9Y4F5 1589 aaPredicted RBP24.08■■□□□ 1.44
SAPCD1-209ENST00000425424 A2ML1A8K2U0 1454 aa24.07■■□□□ 1.44
SAPCD1-209ENST00000425424 UHRF1BP1Q6BDS2 1440 aa24.06■■□□□ 1.44
SAPCD1-209ENST00000425424 TMEM131LA2VDJ0 1609 aa24.05■■□□□ 1.44
SAPCD1-209ENST00000425424 KIF1BO60333 1816 aa24.05■■□□□ 1.44
SAPCD1-209ENST00000425424 UBR1Q8IWV7 1749 aa24.04■■□□□ 1.44
SAPCD1-209ENST00000425424 IDI1Q13907 227 aa24.03■■□□□ 1.44
SAPCD1-209ENST00000425424 CCER1Q8TC90 406 aaPredicted RBP24.03■■□□□ 1.44
SAPCD1-209ENST00000425424 SPATA31E1Q6ZUB1 1445 aa24.01■■□□□ 1.43
SAPCD1-209ENST00000425424 PLPPR3Q6T4P5 718 aa23.99■■□□□ 1.43
SAPCD1-209ENST00000425424 LMTK3Q96Q04 1460 aa23.95■■□□□ 1.42
SAPCD1-209ENST00000425424 SLIT1O75093 1534 aa23.94■■□□□ 1.42
SAPCD1-209ENST00000425424 ARHGAP23Q9P227 1491 aa23.94■■□□□ 1.42
SAPCD1-209ENST00000425424 MYO5BQ9ULV0 1848 aa23.93■■□□□ 1.42
SAPCD1-209ENST00000425424 IFT172Q9UG01 1749 aa23.92■■□□□ 1.42
SAPCD1-209ENST00000425424 THEMISQ8N1K5 641 aaPredicted RBP23.9■■□□□ 1.42
SAPCD1-209ENST00000425424 SIN3AQ96ST3 1273 aa23.9■■□□□ 1.42
SAPCD1-209ENST00000425424 NEXMIFQ5QGS0 1516 aa23.89■■□□□ 1.42
SAPCD1-209ENST00000425424 RPGRIP1LQ68CZ1 1315 aa23.89■■□□□ 1.42
SAPCD1-209ENST00000425424 STAG3Q9UJ98 1225 aa23.89■■□□□ 1.41
SAPCD1-209ENST00000425424 ZFYVE9O95405 1425 aa23.89■■□□□ 1.41
SAPCD1-209ENST00000425424 TMEM2Q9UHN6 1383 aa23.89■■□□□ 1.41
SAPCD1-209ENST00000425424 TIMELESSQ9UNS1 1208 aa23.88■■□□□ 1.41
SAPCD1-209ENST00000425424 PPLO60437 1756 aa23.88■■□□□ 1.41
SAPCD1-209ENST00000425424 STAC3Q96MF2 364 aa23.86■■□□□ 1.41
SAPCD1-209ENST00000425424 MYOM2P54296 1465 aa23.86■■□□□ 1.41
SAPCD1-209ENST00000425424 CHGAP10645 457 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms