RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 DMRT2Q9Y5R5 561 aa33.54■■■□□ 2.96
CDCP1-202ENST00000425231 CROCC2H7BZ55 1655 aa33.54■■■□□ 2.96
CDCP1-202ENST00000425231 SHANK2Q9UPX8 1470 aa33.54■■■□□ 2.96
CDCP1-202ENST00000425231 MYO3AQ8NEV4 1616 aa33.52■■■□□ 2.96
CDCP1-202ENST00000425231 DAPK1P53355 1430 aa33.52■■■□□ 2.96
CDCP1-202ENST00000425231 RNF17Q9BXT8 1623 aaKnown RBP33.51■■■□□ 2.96
CDCP1-202ENST00000425231 EIF2AK4Q9P2K8 1649 aaKnown RBP33.51■■■□□ 2.96
CDCP1-202ENST00000425231 DNMT1P26358 1616 aaKnown RBP33.51■■■□□ 2.95
CDCP1-202ENST00000425231 DUOX2Q9NRD8 1548 aa33.5■■■□□ 2.95
CDCP1-202ENST00000425231 FBXO31Q5XUX0 539 aaPredicted RBP33.49■■■□□ 2.95
CDCP1-202ENST00000425231 NCOA1Q15788 1441 aa33.49■■■□□ 2.95
CDCP1-202ENST00000425231 ZNF142P52746 1687 aaPredicted RBP33.48■■■□□ 2.95
CDCP1-202ENST00000425231 PZPP20742 1482 aa33.48■■■□□ 2.95
CDCP1-202ENST00000425231 CAMSAP1Q5T5Y3 1602 aa33.47■■■□□ 2.95
CDCP1-202ENST00000425231 FBXO41Q8TF61 875 aa33.46■■■□□ 2.95
CDCP1-202ENST00000425231 KIF15Q9NS87 1388 aa33.46■■■□□ 2.95
CDCP1-202ENST00000425231 CEP170BQ9Y4F5 1589 aaPredicted RBP33.46■■■□□ 2.95
CDCP1-202ENST00000425231 RRP7BPQ9NSQ0 103 aa33.45■■■□□ 2.95
CDCP1-202ENST00000425231 PTPRTO14522 1441 aa33.45■■■□□ 2.94
CDCP1-202ENST00000425231 MROH1Q8NDA8 1641 aa33.44■■■□□ 2.94
CDCP1-202ENST00000425231 ABCC3O15438 1527 aa33.41■■■□□ 2.94
CDCP1-202ENST00000425231 TNRQ92752 1358 aa33.4■■■□□ 2.94
CDCP1-202ENST00000425231 A2ML1A8K2U0 1454 aa33.39■■■□□ 2.94
CDCP1-202ENST00000425231 ZC3H13Q5T200 1668 aaKnown RBP33.39■■■□□ 2.94
CDCP1-202ENST00000425231 ERBINQ96RT1 1412 aa33.38■■■□□ 2.93
CDCP1-202ENST00000425231 CERKQ8TCT0 537 aa33.38■■■□□ 2.93
CDCP1-202ENST00000425231 CHIC2Q9UKJ5 165 aa33.38■■■□□ 2.93
CDCP1-202ENST00000425231 PLA2R1Q13018 1463 aa33.37■■■□□ 2.93
CDCP1-202ENST00000425231 NCKAP5LQ9HCH0 1330 aa33.35■■■□□ 2.93
CDCP1-202ENST00000425231 ANKRD30AQ9BXX3 1397 aa33.35■■■□□ 2.93
CDCP1-202ENST00000425231 FAM50AQ14320 339 aaKnown RBP33.35■■■□□ 2.93
CDCP1-202ENST00000425231 CEP152O94986 1710 aa33.31■■■□□ 2.92
CDCP1-202ENST00000425231 PRDM15P57071 1507 aaPredicted RBP33.3■■■□□ 2.92
CDCP1-202ENST00000425231 PKD2Q13563 968 aa33.3■■■□□ 2.92
CDCP1-202ENST00000425231 ADGRL2O95490 1459 aa33.29■■■□□ 2.92
CDCP1-202ENST00000425231 DEPDC5O75140 1603 aa33.27■■■□□ 2.92
CDCP1-202ENST00000425231 SPATA31D1Q6ZQQ2 1576 aa33.27■■■□□ 2.92
CDCP1-202ENST00000425231 NLRP1Q9C000 1473 aa33.26■■■□□ 2.92
CDCP1-202ENST00000425231 ERVK-7P63135 1459 aa33.23■■■□□ 2.91
CDCP1-202ENST00000425231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.23■■■□□ 2.91
CDCP1-202ENST00000425231 PPARGC1BQ86YN6 1023 aaKnown RBP33.21■■■□□ 2.91
CDCP1-202ENST00000425231 ARHGAP31Q2M1Z3 1444 aa33.21■■■□□ 2.91
CDCP1-202ENST00000425231 LTBP4Q8N2S1 1624 aa33.21■■■□□ 2.91
CDCP1-202ENST00000425231 CFAP65Q6ZU64 1925 aaKnown RBP33.19■■■□□ 2.9
CDCP1-202ENST00000425231 UGGT1Q9NYU2 1555 aa33.19■■■□□ 2.9
CDCP1-202ENST00000425231 THEMISQ8N1K5 641 aaPredicted RBP33.19■■■□□ 2.9
CDCP1-202ENST00000425231 KANK1Q14678 1352 aa33.17■■■□□ 2.9
CDCP1-202ENST00000425231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.17■■■□□ 2.9
CDCP1-202ENST00000425231 VWDEQ8N2E2 1590 aa33.15■■■□□ 2.9
CDCP1-202ENST00000425231 ANKRD50Q9ULJ7 1429 aa33.13■■■□□ 2.89
CDCP1-202ENST00000425231 LMTK2Q8IWU2 1503 aa33.12■■■□□ 2.89
CDCP1-202ENST00000425231 POLR1AO95602 1720 aaPredicted RBP33.12■■■□□ 2.89
CDCP1-202ENST00000425231 NEURL4Q96JN8 1562 aa33.12■■■□□ 2.89
CDCP1-202ENST00000425231 ZNF335Q9H4Z2 1342 aaPredicted RBP33.11■■■□□ 2.89
CDCP1-202ENST00000425231 ANKLE2Q86XL3 938 aa33.11■■■□□ 2.89
CDCP1-202ENST00000425231 ROCK1Q13464 1354 aa33.05■■■□□ 2.88
CDCP1-202ENST00000425231 UBR1Q8IWV7 1749 aa33.03■■■□□ 2.88
CDCP1-202ENST00000425231 MED14O60244 1454 aa33.02■■■□□ 2.88
CDCP1-202ENST00000425231 IQSEC2Q5JU85 1478 aa33.01■■■□□ 2.87
CDCP1-202ENST00000425231 EFCAB6Q5THR3 1501 aa33■■■□□ 2.87
CDCP1-202ENST00000425231 ITGAEP38570 1179 aa32.98■■■□□ 2.87
CDCP1-202ENST00000425231 NPHP4O75161 1426 aaPredicted RBP32.97■■■□□ 2.87
CDCP1-202ENST00000425231 NOS1P29475 1434 aa32.95■■■□□ 2.87
CDCP1-202ENST00000425231 PIK3C2BO00750 1634 aa32.94■■■□□ 2.86
CDCP1-202ENST00000425231 UNC13BO14795 1591 aa32.93■■■□□ 2.86
CDCP1-202ENST00000425231 SYNMO15061 1565 aa32.93■■■□□ 2.86
CDCP1-202ENST00000425231 IDI1Q13907 227 aa32.93■■■□□ 2.86
CDCP1-202ENST00000425231 ARHGAP23Q9P227 1491 aa32.92■■■□□ 2.86
CDCP1-202ENST00000425231 SLIT1O75093 1534 aa32.91■■■□□ 2.86
CDCP1-202ENST00000425231 RRBP1Q9P2E9 1410 aaKnown RBP32.91■■■□□ 2.86
CDCP1-202ENST00000425231 IQGAP1P46940 1657 aa32.91■■■□□ 2.86
CDCP1-202ENST00000425231 RPRD2Q5VT52 1461 aaKnown RBP32.89■■■□□ 2.86
CDCP1-202ENST00000425231 TET3O43151 1660 aa32.89■■■□□ 2.86
CDCP1-202ENST00000425231 LTKP29376 864 aa32.88■■■□□ 2.85
CDCP1-202ENST00000425231 SCAF11Q99590 1463 aaKnown RBP32.87■■■□□ 2.85
CDCP1-202ENST00000425231 KDM5AP29375 1690 aaKnown RBP32.86■■■□□ 2.85
CDCP1-202ENST00000425231 TXNDC2Q86VQ3 553 aa32.85■■■□□ 2.85
CDCP1-202ENST00000425231 STAG3Q9UJ98 1225 aa32.85■■■□□ 2.85
CDCP1-202ENST00000425231 TMEM2Q9UHN6 1383 aa32.84■■■□□ 2.85
CDCP1-202ENST00000425231 SLC52A1Q9NWF4 448 aa32.84■■■□□ 2.85
CDCP1-202ENST00000425231 CPS1P31327 1500 aa32.83■■■□□ 2.85
CDCP1-202ENST00000425231 GCC2Q8IWJ2 1684 aa32.83■■■□□ 2.85
CDCP1-202ENST00000425231 IQGAP3Q86VI3 1631 aa32.81■■■□□ 2.84
CDCP1-202ENST00000425231 EID1Q9Y6B2 187 aa32.8■■■□□ 2.84
CDCP1-202ENST00000425231 NUP155O75694 1391 aa32.77■■■□□ 2.84
CDCP1-202ENST00000425231 E9PCH4 1651 aa32.77■■■□□ 2.84
CDCP1-202ENST00000425231 ADGRB3O60242 1522 aa32.76■■■□□ 2.83
CDCP1-202ENST00000425231 UBAP1LF5GYI3 381 aa32.76■■■□□ 2.83
CDCP1-202ENST00000425231 STRCP1A6NGW2 1772 aa32.74■■■□□ 2.83
CDCP1-202ENST00000425231 NAIPQ13075 1403 aa32.68■■■□□ 2.82
CDCP1-202ENST00000425231 TMEM131LA2VDJ0 1609 aa32.66■■■□□ 2.82
CDCP1-202ENST00000425231 MYO5BQ9ULV0 1848 aa32.65■■■□□ 2.82
CDCP1-202ENST00000425231 LRRC7Q96NW7 1537 aa32.64■■■□□ 2.82
CDCP1-202ENST00000425231 ZFYVE9O95405 1425 aa32.61■■■□□ 2.81
CDCP1-202ENST00000425231 TOM1O60784 492 aa32.6■■■□□ 2.81
CDCP1-202ENST00000425231 SLC26A8Q96RN1 970 aa32.58■■■□□ 2.81
CDCP1-202ENST00000425231 HFM1A2PYH4 1435 aa32.57■■■□□ 2.81
CDCP1-202ENST00000425231 RIMS2Q9UQ26 1411 aa32.57■■■□□ 2.8
CDCP1-202ENST00000425231 CHGAP10645 457 aaKnown RBP32.56■■■□□ 2.8
CDCP1-202ENST00000425231 HDGFP51858 240 aaKnown RBP32.54■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms