RNA–Protein interactions for RNA: ENST00000424894.1

PRDM1-204, Transcript of PR/SET domain 1, humanhuman

TSL 5

Gene PRDM1, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-204ENST00000424894 RRP7BPQ9NSQ0 103 aa11.08□□□□□ -0.64
PRDM1-204ENST00000424894 KDM5DQ9BY66 1539 aa11.08□□□□□ -0.64
PRDM1-204ENST00000424894 ZNF142P52746 1687 aaPredicted RBP11.08□□□□□ -0.64
PRDM1-204ENST00000424894 ZMYM3Q14202 1370 aa11.07□□□□□ -0.64
PRDM1-204ENST00000424894 TSPY4P0CV99 314 aa11.07□□□□□ -0.64
PRDM1-204ENST00000424894 TSPY10P0CW01 314 aa11.07□□□□□ -0.64
PRDM1-204ENST00000424894 ESF1Q9H501 851 aaKnown RBP11.07□□□□□ -0.64
PRDM1-204ENST00000424894 DUOX2Q9NRD8 1548 aa11.07□□□□□ -0.64
PRDM1-204ENST00000424894 DEPDC5O75140 1603 aa11.06□□□□□ -0.64
PRDM1-204ENST00000424894 KIF15Q9NS87 1388 aa11.06□□□□□ -0.64
PRDM1-204ENST00000424894 ABCC3O15438 1527 aa11.06□□□□□ -0.64
PRDM1-204ENST00000424894 ZC3H13Q5T200 1668 aaKnown RBP11.06□□□□□ -0.64
PRDM1-204ENST00000424894 ITGAEP38570 1179 aa11.06□□□□□ -0.64
PRDM1-204ENST00000424894 FBXO31Q5XUX0 539 aaPredicted RBP11.06□□□□□ -0.64
PRDM1-204ENST00000424894 UHRF1BP1Q6BDS2 1440 aa11.05□□□□□ -0.64
PRDM1-204ENST00000424894 CEP170BQ9Y4F5 1589 aaPredicted RBP11.05□□□□□ -0.64
PRDM1-204ENST00000424894 SETD1BQ9UPS6 1966 aaKnown RBP11.05□□□□□ -0.64
PRDM1-204ENST00000424894 CNTLNQ9NXG0 1405 aa11.04□□□□□ -0.64
PRDM1-204ENST00000424894 PRDM15P57071 1507 aaPredicted RBP11.04□□□□□ -0.64
PRDM1-204ENST00000424894 RSPH4AQ5TD94 716 aa11.02□□□□□ -0.65
PRDM1-204ENST00000424894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.02□□□□□ -0.65
PRDM1-204ENST00000424894 POLR1AO95602 1720 aaPredicted RBP11.01□□□□□ -0.65
PRDM1-204ENST00000424894 ADGRL2O95490 1459 aa11.01□□□□□ -0.65
PRDM1-204ENST00000424894 WASHC2CQ9Y4E1 1318 aa11.01□□□□□ -0.65
PRDM1-204ENST00000424894 NCOA1Q15788 1441 aa11.01□□□□□ -0.65
PRDM1-204ENST00000424894 PZPP20742 1482 aa11□□□□□ -0.65
PRDM1-204ENST00000424894 MYO5BQ9ULV0 1848 aa11□□□□□ -0.65
PRDM1-204ENST00000424894 NPATQ14207 1427 aa11□□□□□ -0.65
PRDM1-204ENST00000424894 ERBINQ96RT1 1412 aa11□□□□□ -0.65
PRDM1-204ENST00000424894 UBR1Q8IWV7 1749 aa10.98□□□□□ -0.65
PRDM1-204ENST00000424894 ANKRD30AQ9BXX3 1397 aa10.98□□□□□ -0.65
PRDM1-204ENST00000424894 UNC13BO14795 1591 aa10.98□□□□□ -0.65
PRDM1-204ENST00000424894 SPATA31D1Q6ZQQ2 1576 aa10.98□□□□□ -0.65
PRDM1-204ENST00000424894 VWDEQ8N2E2 1590 aa10.98□□□□□ -0.65
PRDM1-204ENST00000424894 PIK3C2BO00750 1634 aa10.98□□□□□ -0.65
PRDM1-204ENST00000424894 NCKAP5LQ9HCH0 1330 aa10.97□□□□□ -0.65
PRDM1-204ENST00000424894 TNRQ92752 1358 aa10.97□□□□□ -0.65
PRDM1-204ENST00000424894 ERVK-7P63135 1459 aa10.97□□□□□ -0.65
PRDM1-204ENST00000424894 SYNMO15061 1565 aa10.97□□□□□ -0.65
PRDM1-204ENST00000424894 E9PCH4 1651 aa10.97□□□□□ -0.65
PRDM1-204ENST00000424894 GCC2Q8IWJ2 1684 aa10.96□□□□□ -0.65
PRDM1-204ENST00000424894 NEURL4Q96JN8 1562 aa10.96□□□□□ -0.65
PRDM1-204ENST00000424894 FAM135AQ9P2D6 1515 aa10.96□□□□□ -0.65
PRDM1-204ENST00000424894 A2ML1A8K2U0 1454 aa10.96□□□□□ -0.65
PRDM1-204ENST00000424894 EFCAB6Q5THR3 1501 aa10.95□□□□□ -0.66
PRDM1-204ENST00000424894 UGGT1Q9NYU2 1555 aa10.94□□□□□ -0.66
PRDM1-204ENST00000424894 RRBP1Q9P2E9 1410 aaKnown RBP10.94□□□□□ -0.66
PRDM1-204ENST00000424894 ANKRD50Q9ULJ7 1429 aa10.94□□□□□ -0.66
PRDM1-204ENST00000424894 ILDR1Q86SU0 546 aaPredicted RBP10.94□□□□□ -0.66
PRDM1-204ENST00000424894 TET3O43151 1660 aa10.94□□□□□ -0.66
PRDM1-204ENST00000424894 IQGAP3Q86VI3 1631 aa10.93□□□□□ -0.66
PRDM1-204ENST00000424894 STRCP1A6NGW2 1772 aa10.93□□□□□ -0.66
PRDM1-204ENST00000424894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.92□□□□□ -0.66
PRDM1-204ENST00000424894 SENP3Q9H4L4 574 aaPredicted RBP10.92□□□□□ -0.66
PRDM1-204ENST00000424894 LMTK2Q8IWU2 1503 aa10.91□□□□□ -0.66
PRDM1-204ENST00000424894 PPP6R1Q9UPN7 881 aa10.91□□□□□ -0.66
PRDM1-204ENST00000424894 LTBP4Q8N2S1 1624 aa10.9□□□□□ -0.66
PRDM1-204ENST00000424894 IQGAP1P46940 1657 aa10.89□□□□□ -0.67
PRDM1-204ENST00000424894 ROCK1Q13464 1354 aa10.89□□□□□ -0.67
PRDM1-204ENST00000424894 PLA2R1Q13018 1463 aa10.88□□□□□ -0.67
PRDM1-204ENST00000424894 NLRP1Q9C000 1473 aa10.88□□□□□ -0.67
PRDM1-204ENST00000424894 SPHKAPQ2M3C7 1700 aa10.88□□□□□ -0.67
PRDM1-204ENST00000424894 KANK1Q14678 1352 aa10.88□□□□□ -0.67
PRDM1-204ENST00000424894 ZNF335Q9H4Z2 1342 aaPredicted RBP10.87□□□□□ -0.67
PRDM1-204ENST00000424894 NAIPQ13075 1403 aa10.87□□□□□ -0.67
PRDM1-204ENST00000424894 ARHGAP31Q2M1Z3 1444 aa10.87□□□□□ -0.67
PRDM1-204ENST00000424894 PTPRTO14522 1441 aa10.86□□□□□ -0.67
PRDM1-204ENST00000424894 ADGRB3O60242 1522 aa10.86□□□□□ -0.67
PRDM1-204ENST00000424894 NOS1P29475 1434 aa10.84□□□□□ -0.67
PRDM1-204ENST00000424894 TMEM131LA2VDJ0 1609 aa10.84□□□□□ -0.67
PRDM1-204ENST00000424894 NUP155O75694 1391 aa10.84□□□□□ -0.67
PRDM1-204ENST00000424894 XIRP1Q702N8 1843 aaKnown RBP10.84□□□□□ -0.67
PRDM1-204ENST00000424894 CLTCL1P53675 1640 aa10.84□□□□□ -0.67
PRDM1-204ENST00000424894 CERKQ8TCT0 537 aa10.83□□□□□ -0.68
PRDM1-204ENST00000424894 KDM5AP29375 1690 aaKnown RBP10.82□□□□□ -0.68
PRDM1-204ENST00000424894 LTKP29376 864 aa10.82□□□□□ -0.68
PRDM1-204ENST00000424894 IDI1Q13907 227 aa10.82□□□□□ -0.68
PRDM1-204ENST00000424894 NPHP4O75161 1426 aaPredicted RBP10.82□□□□□ -0.68
PRDM1-204ENST00000424894 ARHGAP23Q9P227 1491 aa10.81□□□□□ -0.68
PRDM1-204ENST00000424894 SLIT1O75093 1534 aa10.81□□□□□ -0.68
PRDM1-204ENST00000424894 NUTM2DQ5VT03 806 aaPredicted RBP10.8□□□□□ -0.68
PRDM1-204ENST00000424894 HFM1A2PYH4 1435 aa10.8□□□□□ -0.68
PRDM1-204ENST00000424894 SCAF11Q99590 1463 aaKnown RBP10.8□□□□□ -0.68
PRDM1-204ENST00000424894 PKD2Q13563 968 aa10.79□□□□□ -0.68
PRDM1-204ENST00000424894 FOXD1Q16676 465 aa10.79□□□□□ -0.68
PRDM1-204ENST00000424894 THEMISQ8N1K5 641 aaPredicted RBP10.79□□□□□ -0.68
PRDM1-204ENST00000424894 DMRT2Q9Y5R5 561 aa10.79□□□□□ -0.68
PRDM1-204ENST00000424894 MED14O60244 1454 aa10.79□□□□□ -0.68
PRDM1-204ENST00000424894 RPRD2Q5VT52 1461 aaKnown RBP10.79□□□□□ -0.68
PRDM1-204ENST00000424894 KIF1BO60333 1816 aa10.79□□□□□ -0.68
PRDM1-204ENST00000424894 CHGAP10645 457 aaKnown RBP10.78□□□□□ -0.68
PRDM1-204ENST00000424894 ANKLE2Q86XL3 938 aa10.78□□□□□ -0.68
PRDM1-204ENST00000424894 FBXO41Q8TF61 875 aa10.78□□□□□ -0.68
PRDM1-204ENST00000424894 STAG3Q9UJ98 1225 aa10.77□□□□□ -0.69
PRDM1-204ENST00000424894 TMEM2Q9UHN6 1383 aa10.77□□□□□ -0.69
PRDM1-204ENST00000424894 ALKQ9UM73 1620 aa10.76□□□□□ -0.69
PRDM1-204ENST00000424894 TXNDC2Q86VQ3 553 aa10.76□□□□□ -0.69
PRDM1-204ENST00000424894 TRIM52Q96A61 297 aa10.76□□□□□ -0.69
PRDM1-204ENST00000424894 ZFYVE9O95405 1425 aa10.75□□□□□ -0.69
PRDM1-204ENST00000424894 RBM33Q96EV2 1170 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms