RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 RTEL1-TNFRSF6BF6WH68 1400 aa20.44■□□□□ 0.86
LINC00839-201ENST00000424751 ZNF518AQ6AHZ1 1483 aa20.44■□□□□ 0.86
LINC00839-201ENST00000424751 RICTORQ6R327 1708 aa20.43■□□□□ 0.86
LINC00839-201ENST00000424751 KDM5CP41229 1560 aa20.43■□□□□ 0.86
LINC00839-201ENST00000424751 CFAP74Q9C0B2 1584 aa20.43■□□□□ 0.86
LINC00839-201ENST00000424751 FRMPD1Q5SYB0 1578 aa20.43■□□□□ 0.86
LINC00839-201ENST00000424751 L3MBTL2Q969R5 705 aa20.42■□□□□ 0.86
LINC00839-201ENST00000424751 ABCA6Q8N139 1617 aa20.42■□□□□ 0.86
LINC00839-201ENST00000424751 ERBINQ96RT1 1412 aa20.41■□□□□ 0.86
LINC00839-201ENST00000424751 KIF3BO15066 747 aa20.41■□□□□ 0.86
LINC00839-201ENST00000424751 NEO1Q92859 1461 aa20.41■□□□□ 0.86
LINC00839-201ENST00000424751 YEATS2Q9ULM3 1422 aa20.4■□□□□ 0.86
LINC00839-201ENST00000424751 COL17A1Q9UMD9 1497 aaPredicted RBP20.39■□□□□ 0.85
LINC00839-201ENST00000424751 IQGAP3Q86VI3 1631 aa20.38■□□□□ 0.85
LINC00839-201ENST00000424751 RPRD2Q5VT52 1461 aaKnown RBP20.38■□□□□ 0.85
LINC00839-201ENST00000424751 HECW2Q9P2P5 1572 aa20.38■□□□□ 0.85
LINC00839-201ENST00000424751 PLA2R1Q13018 1463 aa20.38■□□□□ 0.85
LINC00839-201ENST00000424751 MROH1Q8NDA8 1641 aa20.37■□□□□ 0.85
LINC00839-201ENST00000424751 MAGI2Q86UL8 1455 aa20.37■□□□□ 0.85
LINC00839-201ENST00000424751 DHX29Q7Z478 1369 aaKnown RBP20.36■□□□□ 0.85
LINC00839-201ENST00000424751 TEX14Q8IWB6 1497 aa20.35■□□□□ 0.85
LINC00839-201ENST00000424751 NBPF8Q3BBV2 869 aa20.35■□□□□ 0.85
LINC00839-201ENST00000424751 MLH3Q9UHC1 1453 aa20.34■□□□□ 0.85
LINC00839-201ENST00000424751 A2MP01023 1474 aa20.33■□□□□ 0.85
LINC00839-201ENST00000424751 DEPDC5O75140 1603 aa20.33■□□□□ 0.84
LINC00839-201ENST00000424751 E9PCH4 1651 aa20.33■□□□□ 0.84
LINC00839-201ENST00000424751 CFAP65Q6ZU64 1925 aaKnown RBP20.33■□□□□ 0.84
LINC00839-201ENST00000424751 DIP2CQ9Y2E4 1556 aa20.33■□□□□ 0.84
LINC00839-201ENST00000424751 GGT6Q6P531 493 aa20.3■□□□□ 0.84
LINC00839-201ENST00000424751 SIGLEC1Q9BZZ2 1709 aa20.3■□□□□ 0.84
LINC00839-201ENST00000424751 CEP152O94986 1710 aa20.3■□□□□ 0.84
LINC00839-201ENST00000424751 TIMELESSQ9UNS1 1208 aa20.28■□□□□ 0.84
LINC00839-201ENST00000424751 ZNF326Q5BKZ1 582 aaKnown RBP20.27■□□□□ 0.84
LINC00839-201ENST00000424751 RGL3Q3MIN7 710 aa20.26■□□□□ 0.83
LINC00839-201ENST00000424751 VWDEQ8N2E2 1590 aa20.26■□□□□ 0.83
LINC00839-201ENST00000424751 KDM2AQ9Y2K7 1162 aa20.25■□□□□ 0.83
LINC00839-201ENST00000424751 EIF2AK4Q9P2K8 1649 aaKnown RBP20.25■□□□□ 0.83
LINC00839-201ENST00000424751 PRDM15P57071 1507 aaPredicted RBP20.24■□□□□ 0.83
LINC00839-201ENST00000424751 UGGT1Q9NYU2 1555 aa20.24■□□□□ 0.83
LINC00839-201ENST00000424751 ATP10AO60312 1499 aa20.23■□□□□ 0.83
LINC00839-201ENST00000424751 TRHP20396 242 aaPredicted RBP20.22■□□□□ 0.83
LINC00839-201ENST00000424751 DNAJC5Q9H3Z4 198 aa20.22■□□□□ 0.83
LINC00839-201ENST00000424751 RNF17Q9BXT8 1623 aaKnown RBP20.21■□□□□ 0.83
LINC00839-201ENST00000424751 TET3O43151 1660 aa20.2■□□□□ 0.82
LINC00839-201ENST00000424751 CCDC144AA2RUR9 1427 aa20.19■□□□□ 0.82
LINC00839-201ENST00000424751 ZMYM4Q5VZL5 1548 aa20.18■□□□□ 0.82
LINC00839-201ENST00000424751 DCAF11Q8TEB1 546 aa20.18■□□□□ 0.82
LINC00839-201ENST00000424751 SPHKAPQ2M3C7 1700 aa20.17■□□□□ 0.82
LINC00839-201ENST00000424751 CLTCL1P53675 1640 aa20.17■□□□□ 0.82
LINC00839-201ENST00000424751 KANK1Q14678 1352 aa20.15■□□□□ 0.82
LINC00839-201ENST00000424751 MLECQ14165 292 aa20.15■□□□□ 0.82
LINC00839-201ENST00000424751 SUPT16HQ9Y5B9 1047 aaKnown RBP20.14■□□□□ 0.81
LINC00839-201ENST00000424751 EFCAB6Q5THR3 1501 aa20.14■□□□□ 0.81
LINC00839-201ENST00000424751 HSPA5P11021 654 aaKnown RBP20.13■□□□□ 0.81
LINC00839-201ENST00000424751 ABCC3O15438 1527 aa20.13■□□□□ 0.81
LINC00839-201ENST00000424751 WASHC2CQ9Y4E1 1318 aa20.12■□□□□ 0.81
LINC00839-201ENST00000424751 BCORL1Q5H9F3 1711 aa20.12■□□□□ 0.81
LINC00839-201ENST00000424751 NPATQ14207 1427 aa20.12■□□□□ 0.81
LINC00839-201ENST00000424751 PTPRTO14522 1441 aa20.11■□□□□ 0.81
LINC00839-201ENST00000424751 TRPM2O94759 1503 aa20.1■□□□□ 0.81
LINC00839-201ENST00000424751 C11orf95C9JLR9 678 aaPredicted RBP20.09■□□□□ 0.81
LINC00839-201ENST00000424751 CAMSAP1Q5T5Y3 1602 aa20.08■□□□□ 0.81
LINC00839-201ENST00000424751 SPATA31E1Q6ZUB1 1445 aa20.08■□□□□ 0.8
LINC00839-201ENST00000424751 MROH2AA6NES4 1674 aa20.07■□□□□ 0.8
LINC00839-201ENST00000424751 LMTK2Q8IWU2 1503 aa20.06■□□□□ 0.8
LINC00839-201ENST00000424751 DDX10Q13206 875 aaKnown RBP20.06■□□□□ 0.8
LINC00839-201ENST00000424751 NBPF1Q3BBV0 1214 aa20.06■□□□□ 0.8
LINC00839-201ENST00000424751 FBXO31Q5XUX0 539 aaPredicted RBP20.05■□□□□ 0.8
LINC00839-201ENST00000424751 SENP3Q9H4L4 574 aaPredicted RBP20.05■□□□□ 0.8
LINC00839-201ENST00000424751 ARHGEF40Q8TER5 1519 aa20.04■□□□□ 0.8
LINC00839-201ENST00000424751 UHRF1BP1Q6BDS2 1440 aa20.01■□□□□ 0.79
LINC00839-201ENST00000424751 SYNMO15061 1565 aa20.01■□□□□ 0.79
LINC00839-201ENST00000424751 CHGAP10645 457 aaKnown RBP20.01■□□□□ 0.79
LINC00839-201ENST00000424751 PRAG1Q86YV5 1406 aa20.01■□□□□ 0.79
LINC00839-201ENST00000424751 CLTCQ00610 1675 aaKnown RBP20■□□□□ 0.79
LINC00839-201ENST00000424751 EIF4G2P78344 907 aaKnown RBP eCLIP19.99■□□□□ 0.79
LINC00839-201ENST00000424751 NUTM2DQ5VT03 806 aaPredicted RBP19.99■□□□□ 0.79
LINC00839-201ENST00000424751 TRPM1Q7Z4N2 1603 aa19.98■□□□□ 0.79
LINC00839-201ENST00000424751 WASHC2AQ641Q2 1341 aa19.98■□□□□ 0.79
LINC00839-201ENST00000424751 KIF1BO60333 1816 aa19.97■□□□□ 0.79
LINC00839-201ENST00000424751 RALGAPBQ86X10 1494 aa19.96■□□□□ 0.79
LINC00839-201ENST00000424751 MYO5BQ9ULV0 1848 aa19.96■□□□□ 0.79
LINC00839-201ENST00000424751 ARID4BQ4LE39 1312 aaPredicted RBP19.95■□□□□ 0.78
LINC00839-201ENST00000424751 CARD11Q9BXL7 1154 aa19.95■□□□□ 0.78
LINC00839-201ENST00000424751 USP47Q96K76 1375 aa19.95■□□□□ 0.78
LINC00839-201ENST00000424751 REREQ9P2R6 1566 aa19.95■□□□□ 0.78
LINC00839-201ENST00000424751 ADGRF5Q8IZF2 1346 aa19.94■□□□□ 0.78
LINC00839-201ENST00000424751 NOS1P29475 1434 aa19.94■□□□□ 0.78
LINC00839-201ENST00000424751 PREX1Q8TCU6 1659 aa19.94■□□□□ 0.78
LINC00839-201ENST00000424751 AGLP35573 1532 aa19.93■□□□□ 0.78
LINC00839-201ENST00000424751 IDI1Q13907 227 aa19.93■□□□□ 0.78
LINC00839-201ENST00000424751 MADDQ8WXG6 1647 aa19.93■□□□□ 0.78
LINC00839-201ENST00000424751 ROCK2O75116 1388 aaKnown RBP19.92■□□□□ 0.78
LINC00839-201ENST00000424751 TSHZ2Q9NRE2 1034 aa19.92■□□□□ 0.78
LINC00839-201ENST00000424751 ZC3H13Q5T200 1668 aaKnown RBP19.92■□□□□ 0.78
LINC00839-201ENST00000424751 PLPPR3Q6T4P5 718 aa19.91■□□□□ 0.78
LINC00839-201ENST00000424751 IFT172Q9UG01 1749 aa19.9■□□□□ 0.78
LINC00839-201ENST00000424751 ST20-MTHFSA0A0A6YYL1 179 aa19.9■□□□□ 0.78
LINC00839-201ENST00000424751 ADGRB3O60242 1522 aa19.9■□□□□ 0.78
LINC00839-201ENST00000424751 PIK3C2BO00750 1634 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms