RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 PTPRMP28827 1452 aa38.38■■■■□ 3.73
TSPAN3-203ENST00000424443 ANKRD50Q9ULJ7 1429 aa38.36■■■■□ 3.73
TSPAN3-203ENST00000424443 CNTLNQ9NXG0 1405 aa38.35■■■■□ 3.73
TSPAN3-203ENST00000424443 PLPPR3Q6T4P5 718 aa38.33■■■■□ 3.73
TSPAN3-203ENST00000424443 RNF17Q9BXT8 1623 aaKnown RBP38.32■■■■□ 3.73
TSPAN3-203ENST00000424443 WASHC2CQ9Y4E1 1318 aa38.3■■■■□ 3.72
TSPAN3-203ENST00000424443 CLTCQ00610 1675 aaKnown RBP38.27■■■■□ 3.72
TSPAN3-203ENST00000424443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.27■■■■□ 3.72
TSPAN3-203ENST00000424443 FAM135AQ9P2D6 1515 aa38.25■■■■□ 3.71
TSPAN3-203ENST00000424443 KDM5DQ9BY66 1539 aa38.24■■■■□ 3.71
TSPAN3-203ENST00000424443 KANK1Q14678 1352 aa38.23■■■■□ 3.71
TSPAN3-203ENST00000424443 MROH2AA6NES4 1674 aa38.22■■■■□ 3.71
TSPAN3-203ENST00000424443 CEBPAP49715 358 aaPredicted RBP38.2■■■■□ 3.71
TSPAN3-203ENST00000424443 DEPDC5O75140 1603 aa38.2■■■■□ 3.71
TSPAN3-203ENST00000424443 MROH1Q8NDA8 1641 aa38.2■■■■□ 3.71
TSPAN3-203ENST00000424443 ZMYM3Q14202 1370 aa38.2■■■■□ 3.71
TSPAN3-203ENST00000424443 PRDM15P57071 1507 aaPredicted RBP38.19■■■■□ 3.7
TSPAN3-203ENST00000424443 NAIPQ13075 1403 aa38.17■■■■□ 3.7
TSPAN3-203ENST00000424443 HFM1A2PYH4 1435 aa38.17■■■■□ 3.7
TSPAN3-203ENST00000424443 C3P01024 1663 aa38.17■■■■□ 3.7
TSPAN3-203ENST00000424443 ZC3H13Q5T200 1668 aaKnown RBP38.16■■■■□ 3.7
TSPAN3-203ENST00000424443 GCC2Q8IWJ2 1684 aa38.16■■■■□ 3.7
TSPAN3-203ENST00000424443 ABCC3O15438 1527 aa38.13■■■■□ 3.69
TSPAN3-203ENST00000424443 CEP152O94986 1710 aa38.1■■■■□ 3.69
TSPAN3-203ENST00000424443 UNC13BO14795 1591 aa38.06■■■■□ 3.68
TSPAN3-203ENST00000424443 VWDEQ8N2E2 1590 aa38.02■■■■□ 3.68
TSPAN3-203ENST00000424443 CAMSAP1Q5T5Y3 1602 aa38.02■■■■□ 3.68
TSPAN3-203ENST00000424443 NUP155O75694 1391 aa38.01■■■■□ 3.68
TSPAN3-203ENST00000424443 PZPP20742 1482 aa38■■■■□ 3.67
TSPAN3-203ENST00000424443 NPATQ14207 1427 aa37.99■■■■□ 3.67
TSPAN3-203ENST00000424443 LMTK2Q8IWU2 1503 aa37.98■■■■□ 3.67
TSPAN3-203ENST00000424443 SETD1BQ9UPS6 1966 aaKnown RBP37.95■■■■□ 3.67
TSPAN3-203ENST00000424443 TRIM52Q96A61 297 aa37.95■■■■□ 3.67
TSPAN3-203ENST00000424443 SETD5Q9C0A6 1442 aa37.95■■■■□ 3.67
TSPAN3-203ENST00000424443 FBXO31Q5XUX0 539 aaPredicted RBP37.94■■■■□ 3.66
TSPAN3-203ENST00000424443 ARHGAP31Q2M1Z3 1444 aa37.93■■■■□ 3.66
TSPAN3-203ENST00000424443 IQGAP3Q86VI3 1631 aa37.92■■■■□ 3.66
TSPAN3-203ENST00000424443 PREX1Q8TCU6 1659 aa37.9■■■■□ 3.66
TSPAN3-203ENST00000424443 UHRF1BP1Q6BDS2 1440 aa37.9■■■■□ 3.66
TSPAN3-203ENST00000424443 EFCAB6Q5THR3 1501 aa37.89■■■■□ 3.66
TSPAN3-203ENST00000424443 TET3O43151 1660 aa37.89■■■■□ 3.66
TSPAN3-203ENST00000424443 TRIM26Q12899 539 aaPredicted RBP37.87■■■■□ 3.65
TSPAN3-203ENST00000424443 TNRQ92752 1358 aa37.86■■■■□ 3.65
TSPAN3-203ENST00000424443 CFAP65Q6ZU64 1925 aaKnown RBP37.86■■■■□ 3.65
TSPAN3-203ENST00000424443 ACIN1Q9UKV3 1341 aaKnown RBP37.85■■■■□ 3.65
TSPAN3-203ENST00000424443 ERVK-7P63135 1459 aa37.83■■■■□ 3.65
TSPAN3-203ENST00000424443 RAB3GAP2Q9H2M9 1393 aa37.81■■■■□ 3.64
TSPAN3-203ENST00000424443 SPATA31D1Q6ZQQ2 1576 aa37.81■■■■□ 3.64
TSPAN3-203ENST00000424443 RPRD2Q5VT52 1461 aaKnown RBP37.8■■■■□ 3.64
TSPAN3-203ENST00000424443 LMTK3Q96Q04 1460 aa37.8■■■■□ 3.64
TSPAN3-203ENST00000424443 MYO3AQ8NEV4 1616 aa37.77■■■■□ 3.64
TSPAN3-203ENST00000424443 SLC4A1APQ9BWU0 796 aaKnown RBP37.74■■■■□ 3.63
TSPAN3-203ENST00000424443 E9PCH4 1651 aa37.73■■■■□ 3.63
TSPAN3-203ENST00000424443 NLRP1Q9C000 1473 aa37.71■■■■□ 3.63
TSPAN3-203ENST00000424443 CEP170BQ9Y4F5 1589 aaPredicted RBP37.69■■■■□ 3.62
TSPAN3-203ENST00000424443 HSPA2P54652 639 aa37.69■■■■□ 3.62
TSPAN3-203ENST00000424443 A2ML1A8K2U0 1454 aa37.67■■■■□ 3.62
TSPAN3-203ENST00000424443 NOS1P29475 1434 aa37.67■■■■□ 3.62
TSPAN3-203ENST00000424443 ZNF142P52746 1687 aaPredicted RBP37.67■■■■□ 3.62
TSPAN3-203ENST00000424443 HRCP23327 699 aa37.66■■■■□ 3.62
TSPAN3-203ENST00000424443 PKD2Q13563 968 aa37.66■■■■□ 3.62
TSPAN3-203ENST00000424443 MPHOSPH9Q99550 1183 aa37.61■■■■□ 3.61
TSPAN3-203ENST00000424443 SYNMO15061 1565 aa37.61■■■■□ 3.61
TSPAN3-203ENST00000424443 SLC52A1Q9NWF4 448 aa37.61■■■■□ 3.61
TSPAN3-203ENST00000424443 UGGT1Q9NYU2 1555 aa37.58■■■■□ 3.61
TSPAN3-203ENST00000424443 STAG3Q9UJ98 1225 aa37.58■■■■□ 3.61
TSPAN3-203ENST00000424443 THEMISQ8N1K5 641 aaPredicted RBP37.56■■■■□ 3.6
TSPAN3-203ENST00000424443 IDI1Q13907 227 aa37.56■■■■□ 3.6
TSPAN3-203ENST00000424443 SPHKAPQ2M3C7 1700 aa37.54■■■■□ 3.6
TSPAN3-203ENST00000424443 PIK3C2BO00750 1634 aa37.5■■■■□ 3.59
TSPAN3-203ENST00000424443 PTPRTO14522 1441 aa37.5■■■■□ 3.59
TSPAN3-203ENST00000424443 FOXD1Q16676 465 aa37.48■■■■□ 3.59
TSPAN3-203ENST00000424443 UBR1Q8IWV7 1749 aa37.46■■■■□ 3.59
TSPAN3-203ENST00000424443 CHGAP10645 457 aaKnown RBP37.45■■■■□ 3.59
TSPAN3-203ENST00000424443 TRPM2O94759 1503 aa37.44■■■■□ 3.58
TSPAN3-203ENST00000424443 PLA2R1Q13018 1463 aa37.44■■■■□ 3.58
TSPAN3-203ENST00000424443 ADGRB3O60242 1522 aa37.41■■■■□ 3.58
TSPAN3-203ENST00000424443 KDM5AP29375 1690 aaKnown RBP37.41■■■■□ 3.58
TSPAN3-203ENST00000424443 ANKLE2Q86XL3 938 aa37.37■■■■□ 3.57
TSPAN3-203ENST00000424443 PCGF6Q9BYE7 350 aa37.36■■■■□ 3.57
TSPAN3-203ENST00000424443 DMRT2Q9Y5R5 561 aa37.36■■■■□ 3.57
TSPAN3-203ENST00000424443 NCKAP5LQ9HCH0 1330 aa37.35■■■■□ 3.57
TSPAN3-203ENST00000424443 STRCQ7RTU9 1775 aa37.35■■■■□ 3.57
TSPAN3-203ENST00000424443 CLTCL1P53675 1640 aa37.33■■■■□ 3.57
TSPAN3-203ENST00000424443 TMEM131LA2VDJ0 1609 aa37.32■■■■□ 3.56
TSPAN3-203ENST00000424443 EID1Q9Y6B2 187 aa37.31■■■■□ 3.56
TSPAN3-203ENST00000424443 CCDC144AA2RUR9 1427 aa37.31■■■■□ 3.56
TSPAN3-203ENST00000424443 TMEM2Q9UHN6 1383 aa37.31■■■■□ 3.56
TSPAN3-203ENST00000424443 SLIT1O75093 1534 aa37.29■■■■□ 3.56
TSPAN3-203ENST00000424443 POLR1AO95602 1720 aaPredicted RBP37.28■■■■□ 3.56
TSPAN3-203ENST00000424443 MYO5BQ9ULV0 1848 aa37.28■■■■□ 3.56
TSPAN3-203ENST00000424443 TXNDC2Q86VQ3 553 aa37.27■■■■□ 3.56
TSPAN3-203ENST00000424443 KIF1BO60333 1816 aa37.27■■■■□ 3.56
TSPAN3-203ENST00000424443 ARHGAP23Q9P227 1491 aa37.26■■■■□ 3.56
TSPAN3-203ENST00000424443 HDGFP51858 240 aaKnown RBP37.26■■■■□ 3.55
TSPAN3-203ENST00000424443 ZNF326Q5BKZ1 582 aaKnown RBP37.26■■■■□ 3.55
TSPAN3-203ENST00000424443 SCAF11Q99590 1463 aaKnown RBP37.23■■■■□ 3.55
TSPAN3-203ENST00000424443 LTKP29376 864 aa37.2■■■■□ 3.55
TSPAN3-203ENST00000424443 RIMS2Q9UQ26 1411 aa37.19■■■■□ 3.54
TSPAN3-203ENST00000424443 ANKRD30BQ9BXX2 1392 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms