RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 ESF1Q9H501 851 aaKnown RBP25.65■■□□□ 1.7
FOXN4-203ENST00000423960 GGT6Q6P531 493 aa25.62■■□□□ 1.69
FOXN4-203ENST00000423960 ERBINQ96RT1 1412 aa25.6■■□□□ 1.69
FOXN4-203ENST00000423960 ANKRD50Q9ULJ7 1429 aa25.58■■□□□ 1.69
FOXN4-203ENST00000423960 PPP6R1Q9UPN7 881 aa25.56■■□□□ 1.68
FOXN4-203ENST00000423960 NAIPQ13075 1403 aa25.53■■□□□ 1.68
FOXN4-203ENST00000423960 TRIM26Q12899 539 aaPredicted RBP25.52■■□□□ 1.68
FOXN4-203ENST00000423960 CNTLNQ9NXG0 1405 aa25.52■■□□□ 1.68
FOXN4-203ENST00000423960 EIF2AK4Q9P2K8 1649 aaKnown RBP25.52■■□□□ 1.68
FOXN4-203ENST00000423960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.51■■□□□ 1.67
FOXN4-203ENST00000423960 HFM1A2PYH4 1435 aa25.51■■□□□ 1.67
FOXN4-203ENST00000423960 C3P01024 1663 aa25.48■■□□□ 1.67
FOXN4-203ENST00000423960 WASHC2CQ9Y4E1 1318 aa25.48■■□□□ 1.67
FOXN4-203ENST00000423960 ZMYM3Q14202 1370 aa25.47■■□□□ 1.67
FOXN4-203ENST00000423960 UHRF1BP1Q6BDS2 1440 aa25.46■■□□□ 1.67
FOXN4-203ENST00000423960 PREX1Q8TCU6 1659 aa25.45■■□□□ 1.67
FOXN4-203ENST00000423960 RNF17Q9BXT8 1623 aaKnown RBP25.45■■□□□ 1.66
FOXN4-203ENST00000423960 KANK1Q14678 1352 aa25.44■■□□□ 1.66
FOXN4-203ENST00000423960 ILDR1Q86SU0 546 aaPredicted RBP25.42■■□□□ 1.66
FOXN4-203ENST00000423960 SETD5Q9C0A6 1442 aa25.41■■□□□ 1.66
FOXN4-203ENST00000423960 CLTCQ00610 1675 aaKnown RBP25.4■■□□□ 1.66
FOXN4-203ENST00000423960 GCC2Q8IWJ2 1684 aa25.4■■□□□ 1.66
FOXN4-203ENST00000423960 MROH1Q8NDA8 1641 aa25.39■■□□□ 1.66
FOXN4-203ENST00000423960 MROH2AA6NES4 1674 aa25.38■■□□□ 1.65
FOXN4-203ENST00000423960 PRDM15P57071 1507 aaPredicted RBP25.37■■□□□ 1.65
FOXN4-203ENST00000423960 KDM5DQ9BY66 1539 aa25.37■■□□□ 1.65
FOXN4-203ENST00000423960 FAM135AQ9P2D6 1515 aa25.37■■□□□ 1.65
FOXN4-203ENST00000423960 DEPDC5O75140 1603 aa25.37■■□□□ 1.65
FOXN4-203ENST00000423960 NUP155O75694 1391 aa25.37■■□□□ 1.65
FOXN4-203ENST00000423960 NPATQ14207 1427 aa25.37■■□□□ 1.65
FOXN4-203ENST00000423960 TRIM52Q96A61 297 aa25.36■■□□□ 1.65
FOXN4-203ENST00000423960 ABCC3O15438 1527 aa25.34■■□□□ 1.65
FOXN4-203ENST00000423960 ACIN1Q9UKV3 1341 aaKnown RBP25.33■■□□□ 1.64
FOXN4-203ENST00000423960 UNC13BO14795 1591 aa25.32■■□□□ 1.64
FOXN4-203ENST00000423960 VWDEQ8N2E2 1590 aa25.32■■□□□ 1.64
FOXN4-203ENST00000423960 RAB3GAP2Q9H2M9 1393 aa25.31■■□□□ 1.64
FOXN4-203ENST00000423960 HRCP23327 699 aa25.31■■□□□ 1.64
FOXN4-203ENST00000423960 SETD1BQ9UPS6 1966 aaKnown RBP25.31■■□□□ 1.64
FOXN4-203ENST00000423960 LMTK2Q8IWU2 1503 aa25.28■■□□□ 1.64
FOXN4-203ENST00000423960 ZC3H13Q5T200 1668 aaKnown RBP25.28■■□□□ 1.64
FOXN4-203ENST00000423960 FBXO31Q5XUX0 539 aaPredicted RBP25.27■■□□□ 1.64
FOXN4-203ENST00000423960 DMRT2Q9Y5R5 561 aa25.25■■□□□ 1.63
FOXN4-203ENST00000423960 CEP152O94986 1710 aa25.25■■□□□ 1.63
FOXN4-203ENST00000423960 PZPP20742 1482 aa25.24■■□□□ 1.63
FOXN4-203ENST00000423960 ARHGAP31Q2M1Z3 1444 aa25.24■■□□□ 1.63
FOXN4-203ENST00000423960 STRCQ7RTU9 1775 aa25.23■■□□□ 1.63
FOXN4-203ENST00000423960 SLC4A1APQ9BWU0 796 aaKnown RBP25.23■■□□□ 1.63
FOXN4-203ENST00000423960 IQGAP3Q86VI3 1631 aa25.23■■□□□ 1.63
FOXN4-203ENST00000423960 PCGF6Q9BYE7 350 aa25.22■■□□□ 1.63
FOXN4-203ENST00000423960 CAMSAP1Q5T5Y3 1602 aa25.21■■□□□ 1.63
FOXN4-203ENST00000423960 MYO3AQ8NEV4 1616 aa25.2■■□□□ 1.62
FOXN4-203ENST00000423960 FBXO41Q8TF61 875 aa25.19■■□□□ 1.62
FOXN4-203ENST00000423960 TNRQ92752 1358 aa25.18■■□□□ 1.62
FOXN4-203ENST00000423960 EFCAB6Q5THR3 1501 aa25.18■■□□□ 1.62
FOXN4-203ENST00000423960 MPHOSPH9Q99550 1183 aa25.18■■□□□ 1.62
FOXN4-203ENST00000423960 NCKAP5LQ9HCH0 1330 aa25.17■■□□□ 1.62
FOXN4-203ENST00000423960 TET3O43151 1660 aa25.17■■□□□ 1.62
FOXN4-203ENST00000423960 PKD2Q13563 968 aa25.17■■□□□ 1.62
FOXN4-203ENST00000423960 CEP170BQ9Y4F5 1589 aaPredicted RBP25.17■■□□□ 1.62
FOXN4-203ENST00000423960 PTPRTO14522 1441 aa25.15■■□□□ 1.62
FOXN4-203ENST00000423960 CERKQ8TCT0 537 aa25.15■■□□□ 1.62
FOXN4-203ENST00000423960 RPRD2Q5VT52 1461 aaKnown RBP25.15■■□□□ 1.62
FOXN4-203ENST00000423960 ERVK-7P63135 1459 aa25.14■■□□□ 1.61
FOXN4-203ENST00000423960 A2ML1A8K2U0 1454 aa25.13■■□□□ 1.61
FOXN4-203ENST00000423960 ZNF142P52746 1687 aaPredicted RBP25.13■■□□□ 1.61
FOXN4-203ENST00000423960 SPATA31D1Q6ZQQ2 1576 aa25.1■■□□□ 1.61
FOXN4-203ENST00000423960 NOS1P29475 1434 aa25.09■■□□□ 1.61
FOXN4-203ENST00000423960 E9PCH4 1651 aa25.08■■□□□ 1.61
FOXN4-203ENST00000423960 FOXD1Q16676 465 aa25.08■■□□□ 1.61
FOXN4-203ENST00000423960 PLA2R1Q13018 1463 aa25.08■■□□□ 1.6
FOXN4-203ENST00000423960 CFAP65Q6ZU64 1925 aaKnown RBP25.08■■□□□ 1.6
FOXN4-203ENST00000423960 SLC52A1Q9NWF4 448 aa25.06■■□□□ 1.6
FOXN4-203ENST00000423960 IDI1Q13907 227 aa25.04■■□□□ 1.6
FOXN4-203ENST00000423960 NLRP1Q9C000 1473 aa25.02■■□□□ 1.6
FOXN4-203ENST00000423960 THEMISQ8N1K5 641 aaPredicted RBP25■■□□□ 1.59
FOXN4-203ENST00000423960 SYNMO15061 1565 aa24.99■■□□□ 1.59
FOXN4-203ENST00000423960 UGGT1Q9NYU2 1555 aa24.98■■□□□ 1.59
FOXN4-203ENST00000423960 ZNF335Q9H4Z2 1342 aaPredicted RBP24.98■■□□□ 1.59
FOXN4-203ENST00000423960 STAG3Q9UJ98 1225 aa24.97■■□□□ 1.59
FOXN4-203ENST00000423960 ANKLE2Q86XL3 938 aa24.96■■□□□ 1.59
FOXN4-203ENST00000423960 LTBP4Q8N2S1 1624 aa24.96■■□□□ 1.59
FOXN4-203ENST00000423960 SPHKAPQ2M3C7 1700 aa24.93■■□□□ 1.58
FOXN4-203ENST00000423960 CHGAP10645 457 aaKnown RBP24.93■■□□□ 1.58
FOXN4-203ENST00000423960 TRPM2O94759 1503 aa24.92■■□□□ 1.58
FOXN4-203ENST00000423960 ANKRD30BQ9BXX2 1392 aa24.9■■□□□ 1.58
FOXN4-203ENST00000423960 NEURL4Q96JN8 1562 aa24.89■■□□□ 1.58
FOXN4-203ENST00000423960 PIK3C2BO00750 1634 aa24.88■■□□□ 1.57
FOXN4-203ENST00000423960 DHX57Q6P158 1386 aaKnown RBP24.88■■□□□ 1.57
FOXN4-203ENST00000423960 CCDC144AA2RUR9 1427 aa24.87■■□□□ 1.57
FOXN4-203ENST00000423960 NPHP4O75161 1426 aaPredicted RBP24.86■■□□□ 1.57
FOXN4-203ENST00000423960 POLR1AO95602 1720 aaPredicted RBP24.85■■□□□ 1.57
FOXN4-203ENST00000423960 CLTCL1P53675 1640 aa24.83■■□□□ 1.57
FOXN4-203ENST00000423960 ADGRB3O60242 1522 aa24.83■■□□□ 1.57
FOXN4-203ENST00000423960 UBR1Q8IWV7 1749 aa24.83■■□□□ 1.57
FOXN4-203ENST00000423960 TMEM2Q9UHN6 1383 aa24.81■■□□□ 1.56
FOXN4-203ENST00000423960 ZNF326Q5BKZ1 582 aaKnown RBP24.81■■□□□ 1.56
FOXN4-203ENST00000423960 MED14O60244 1454 aa24.81■■□□□ 1.56
FOXN4-203ENST00000423960 TMEM131LA2VDJ0 1609 aa24.8■■□□□ 1.56
FOXN4-203ENST00000423960 HDGFP51858 240 aaKnown RBP24.8■■□□□ 1.56
FOXN4-203ENST00000423960 EID1Q9Y6B2 187 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms