RNA–Protein interactions for RNA: ENST00000423693.5

HDLBP-210, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-210ENST00000423693 FER1L4A9Z1Z3 1794 aa19.61■□□□□ 0.73
HDLBP-210ENST00000423693 FAM135AQ9P2D6 1515 aa19.61■□□□□ 0.73
HDLBP-210ENST00000423693 ANKRD50Q9ULJ7 1429 aa19.59■□□□□ 0.73
HDLBP-210ENST00000423693 RIMS1Q86UR5 1692 aaKnown RBP19.58■□□□□ 0.72
HDLBP-210ENST00000423693 RNF17Q9BXT8 1623 aaKnown RBP19.58■□□□□ 0.72
HDLBP-210ENST00000423693 WASHC2CQ9Y4E1 1318 aa19.55■□□□□ 0.72
HDLBP-210ENST00000423693 ZMYM3Q14202 1370 aa19.54■□□□□ 0.72
HDLBP-210ENST00000423693 MROH2AA6NES4 1674 aa19.53■□□□□ 0.72
HDLBP-210ENST00000423693 KDM5DQ9BY66 1539 aa19.53■□□□□ 0.72
HDLBP-210ENST00000423693 KANK1Q14678 1352 aa19.52■□□□□ 0.72
HDLBP-210ENST00000423693 DEPDC5O75140 1603 aa19.51■□□□□ 0.71
HDLBP-210ENST00000423693 PRDM15P57071 1507 aaPredicted RBP19.51■□□□□ 0.71
HDLBP-210ENST00000423693 HFM1A2PYH4 1435 aa19.51■□□□□ 0.71
HDLBP-210ENST00000423693 MROH1Q8NDA8 1641 aa19.5■□□□□ 0.71
HDLBP-210ENST00000423693 CLTCQ00610 1675 aaKnown RBP19.49■□□□□ 0.71
HDLBP-210ENST00000423693 NAIPQ13075 1403 aa19.49■□□□□ 0.71
HDLBP-210ENST00000423693 ZC3H13Q5T200 1668 aaKnown RBP19.49■□□□□ 0.71
HDLBP-210ENST00000423693 CEBPAP49715 358 aaPredicted RBP19.48■□□□□ 0.71
HDLBP-210ENST00000423693 ABCC3O15438 1527 aa19.47■□□□□ 0.71
HDLBP-210ENST00000423693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.47■□□□□ 0.715e-13■■■□□ 18.8
HDLBP-210ENST00000423693 NPATQ14207 1427 aa19.47■□□□□ 0.71
HDLBP-210ENST00000423693 C3P01024 1663 aa19.46■□□□□ 0.71
HDLBP-210ENST00000423693 VWDEQ8N2E2 1590 aa19.45■□□□□ 0.7
HDLBP-210ENST00000423693 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
HDLBP-210ENST00000423693 LMTK2Q8IWU2 1503 aa19.44■□□□□ 0.7
HDLBP-210ENST00000423693 ACIN1Q9UKV3 1341 aaKnown RBP19.44■□□□□ 0.7
HDLBP-210ENST00000423693 GCC2Q8IWJ2 1684 aa19.43■□□□□ 0.7
HDLBP-210ENST00000423693 PZPP20742 1482 aa19.43■□□□□ 0.7
HDLBP-210ENST00000423693 SETD1BQ9UPS6 1966 aaKnown RBP19.43■□□□□ 0.7
HDLBP-210ENST00000423693 UNC13BO14795 1591 aa19.43■□□□□ 0.7
HDLBP-210ENST00000423693 ARHGAP31Q2M1Z3 1444 aa19.42■□□□□ 0.7
HDLBP-210ENST00000423693 NUP155O75694 1391 aa19.39■□□□□ 0.69
HDLBP-210ENST00000423693 CAMSAP1Q5T5Y3 1602 aa19.38■□□□□ 0.69
HDLBP-210ENST00000423693 CEP152O94986 1710 aa19.37■□□□□ 0.69
HDLBP-210ENST00000423693 SETD5Q9C0A6 1442 aa19.36■□□□□ 0.69
HDLBP-210ENST00000423693 FBXO31Q5XUX0 539 aaPredicted RBP19.36■□□□□ 0.69
HDLBP-210ENST00000423693 UHRF1BP1Q6BDS2 1440 aa19.35■□□□□ 0.69
HDLBP-210ENST00000423693 IQGAP3Q86VI3 1631 aa19.35■□□□□ 0.69
HDLBP-210ENST00000423693 RPRD2Q5VT52 1461 aaKnown RBP19.35■□□□□ 0.69
HDLBP-210ENST00000423693 TNRQ92752 1358 aa19.34■□□□□ 0.69
HDLBP-210ENST00000423693 PREX1Q8TCU6 1659 aa19.34■□□□□ 0.69
HDLBP-210ENST00000423693 EFCAB6Q5THR3 1501 aa19.34■□□□□ 0.69
HDLBP-210ENST00000423693 TET3O43151 1660 aa19.33■□□□□ 0.69
HDLBP-210ENST00000423693 LMTK3Q96Q04 1460 aa19.33■□□□□ 0.68
HDLBP-210ENST00000423693 SPATA31D1Q6ZQQ2 1576 aa19.32■□□□□ 0.68
HDLBP-210ENST00000423693 HRCP23327 699 aa19.32■□□□□ 0.68
HDLBP-210ENST00000423693 ERVK-7P63135 1459 aa19.32■□□□□ 0.68
HDLBP-210ENST00000423693 TRIM52Q96A61 297 aa19.31■□□□□ 0.68
HDLBP-210ENST00000423693 NLRP1Q9C000 1473 aa19.29■□□□□ 0.68
HDLBP-210ENST00000423693 TRIM26Q12899 539 aaPredicted RBP19.28■□□□□ 0.68
HDLBP-210ENST00000423693 NOS1P29475 1434 aa19.27■□□□□ 0.68
HDLBP-210ENST00000423693 A2ML1A8K2U0 1454 aa19.27■□□□□ 0.67
HDLBP-210ENST00000423693 MYO3AQ8NEV4 1616 aa19.26■□□□□ 0.67
HDLBP-210ENST00000423693 SLC52A1Q9NWF4 448 aa19.26■□□□□ 0.67
HDLBP-210ENST00000423693 RAB3GAP2Q9H2M9 1393 aa19.26■□□□□ 0.67
HDLBP-210ENST00000423693 ZNF142P52746 1687 aaPredicted RBP19.24■□□□□ 0.67
HDLBP-210ENST00000423693 CEP170BQ9Y4F5 1589 aaPredicted RBP19.24■□□□□ 0.67
HDLBP-210ENST00000423693 SLC4A1APQ9BWU0 796 aaKnown RBP19.24■□□□□ 0.67
HDLBP-210ENST00000423693 E9PCH4 1651 aa19.23■□□□□ 0.67
HDLBP-210ENST00000423693 CFAP65Q6ZU64 1925 aaKnown RBP19.22■□□□□ 0.67
HDLBP-210ENST00000423693 HSPA2P54652 639 aa19.22■□□□□ 0.67
HDLBP-210ENST00000423693 THEMISQ8N1K5 641 aaPredicted RBP19.22■□□□□ 0.67
HDLBP-210ENST00000423693 MPHOSPH9Q99550 1183 aa19.21■□□□□ 0.67
HDLBP-210ENST00000423693 PKD2Q13563 968 aa19.2■□□□□ 0.66
HDLBP-210ENST00000423693 PTPRTO14522 1441 aa19.19■□□□□ 0.66
HDLBP-210ENST00000423693 IDI1Q13907 227 aa19.19■□□□□ 0.66
HDLBP-210ENST00000423693 UGGT1Q9NYU2 1555 aa19.19■□□□□ 0.66
HDLBP-210ENST00000423693 SYNMO15061 1565 aa19.18■□□□□ 0.66
HDLBP-210ENST00000423693 PLA2R1Q13018 1463 aa19.17■□□□□ 0.66
HDLBP-210ENST00000423693 STAG3Q9UJ98 1225 aa19.15■□□□□ 0.66
HDLBP-210ENST00000423693 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
HDLBP-210ENST00000423693 KDM5AP29375 1690 aaKnown RBP19.14■□□□□ 0.66
HDLBP-210ENST00000423693 PIK3C2BO00750 1634 aa19.13■□□□□ 0.65
HDLBP-210ENST00000423693 SPHKAPQ2M3C7 1700 aa19.11■□□□□ 0.65
HDLBP-210ENST00000423693 UBR1Q8IWV7 1749 aa19.11■□□□□ 0.65
HDLBP-210ENST00000423693 TRPM2O94759 1503 aa19.11■□□□□ 0.65
HDLBP-210ENST00000423693 ANKLE2Q86XL3 938 aa19.11■□□□□ 0.65
HDLBP-210ENST00000423693 ADGRB3O60242 1522 aa19.09■□□□□ 0.65
HDLBP-210ENST00000423693 TMEM2Q9UHN6 1383 aa19.08■□□□□ 0.65
HDLBP-210ENST00000423693 HDGFP51858 240 aaKnown RBP19.08■□□□□ 0.64
HDLBP-210ENST00000423693 SLIT1O75093 1534 aa19.08■□□□□ 0.64
HDLBP-210ENST00000423693 ARHGAP23Q9P227 1491 aa19.08■□□□□ 0.64
HDLBP-210ENST00000423693 STRCQ7RTU9 1775 aa19.07■□□□□ 0.64
HDLBP-210ENST00000423693 EID1Q9Y6B2 187 aa19.07■□□□□ 0.64
HDLBP-210ENST00000423693 NCKAP5LQ9HCH0 1330 aa19.06■□□□□ 0.64
HDLBP-210ENST00000423693 FOXD1Q16676 465 aa19.06■□□□□ 0.64
HDLBP-210ENST00000423693 TMEM131LA2VDJ0 1609 aa19.05■□□□□ 0.64
HDLBP-210ENST00000423693 CHGAP10645 457 aaKnown RBP19.04■□□□□ 0.64
HDLBP-210ENST00000423693 TXNDC2Q86VQ3 553 aa19.04■□□□□ 0.64
HDLBP-210ENST00000423693 MED14O60244 1454 aa19.03■□□□□ 0.64
HDLBP-210ENST00000423693 CCDC144AA2RUR9 1427 aa19.03■□□□□ 0.64
HDLBP-210ENST00000423693 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.02■□□□□ 0.64
HDLBP-210ENST00000423693 CLTCL1P53675 1640 aa19.02■□□□□ 0.64
HDLBP-210ENST00000423693 SCAF11Q99590 1463 aaKnown RBP19.02■□□□□ 0.63
HDLBP-210ENST00000423693 LTKP29376 864 aa19.01■□□□□ 0.63
HDLBP-210ENST00000423693 POLR1AO95602 1720 aaPredicted RBP19■□□□□ 0.63
HDLBP-210ENST00000423693 ANKRD30BQ9BXX2 1392 aa19■□□□□ 0.63
HDLBP-210ENST00000423693 NPHP4O75161 1426 aaPredicted RBP18.99■□□□□ 0.63
HDLBP-210ENST00000423693 ZFYVE9O95405 1425 aa18.99■□□□□ 0.63
HDLBP-210ENST00000423693 NEURL4Q96JN8 1562 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms