RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
BRAT1-202ENST00000421712 CNTLNQ9NXG0 1405 aa23.84■■□□□ 1.41
BRAT1-202ENST00000421712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.84■■□□□ 1.412e-6■□□□□ 8.5
BRAT1-202ENST00000421712 ERBINQ96RT1 1412 aa23.84■■□□□ 1.41
BRAT1-202ENST00000421712 ROCK1Q13464 1354 aa23.82■■□□□ 1.4
BRAT1-202ENST00000421712 EIF2AK4Q9P2K8 1649 aaKnown RBP23.81■■□□□ 1.4
BRAT1-202ENST00000421712 ZMYM3Q14202 1370 aa23.79■■□□□ 1.4
BRAT1-202ENST00000421712 ANKRD50Q9ULJ7 1429 aa23.79■■□□□ 1.4
BRAT1-202ENST00000421712 CLTCQ00610 1675 aaKnown RBP23.79■■□□□ 1.4
BRAT1-202ENST00000421712 KANK1Q14678 1352 aa23.75■■□□□ 1.39
BRAT1-202ENST00000421712 RNF17Q9BXT8 1623 aaKnown RBP23.74■■□□□ 1.39
BRAT1-202ENST00000421712 KDM5DQ9BY66 1539 aa23.73■■□□□ 1.39
BRAT1-202ENST00000421712 C3P01024 1663 aa23.73■■□□□ 1.39
BRAT1-202ENST00000421712 MROH2AA6NES4 1674 aa23.71■■□□□ 1.39
BRAT1-202ENST00000421712 FAM135AQ9P2D6 1515 aa23.69■■□□□ 1.38
BRAT1-202ENST00000421712 MROH1Q8NDA8 1641 aa23.67■■□□□ 1.38
BRAT1-202ENST00000421712 ABCC3O15438 1527 aa23.67■■□□□ 1.38
BRAT1-202ENST00000421712 SETD1BQ9UPS6 1966 aaKnown RBP23.65■■□□□ 1.38
BRAT1-202ENST00000421712 PRDM15P57071 1507 aaPredicted RBP23.65■■□□□ 1.38
BRAT1-202ENST00000421712 FBXO31Q5XUX0 539 aaPredicted RBP23.65■■□□□ 1.38
BRAT1-202ENST00000421712 CEP152O94986 1710 aa23.64■■□□□ 1.38
BRAT1-202ENST00000421712 DEPDC5O75140 1603 aa23.64■■□□□ 1.38
BRAT1-202ENST00000421712 NAIPQ13075 1403 aa23.64■■□□□ 1.37
BRAT1-202ENST00000421712 ZC3H13Q5T200 1668 aaKnown RBP23.64■■□□□ 1.37
BRAT1-202ENST00000421712 HFM1A2PYH4 1435 aa23.61■■□□□ 1.37
BRAT1-202ENST00000421712 NPATQ14207 1427 aa23.61■■□□□ 1.37
BRAT1-202ENST00000421712 PZPP20742 1482 aa23.61■■□□□ 1.37
BRAT1-202ENST00000421712 UHRF1BP1Q6BDS2 1440 aa23.6■■□□□ 1.37
BRAT1-202ENST00000421712 NUP155O75694 1391 aa23.6■■□□□ 1.37
BRAT1-202ENST00000421712 CFAP65Q6ZU64 1925 aaKnown RBP23.59■■□□□ 1.37
BRAT1-202ENST00000421712 ILDR1Q86SU0 546 aaPredicted RBP23.59■■□□□ 1.37
BRAT1-202ENST00000421712 TRIM52Q96A61 297 aa23.59■■□□□ 1.37
BRAT1-202ENST00000421712 CAMSAP1Q5T5Y3 1602 aa23.58■■□□□ 1.36
BRAT1-202ENST00000421712 HSPA2P54652 639 aa23.57■■□□□ 1.36
BRAT1-202ENST00000421712 GCC2Q8IWJ2 1684 aa23.57■■□□□ 1.36
BRAT1-202ENST00000421712 PREX1Q8TCU6 1659 aa23.57■■□□□ 1.36
BRAT1-202ENST00000421712 TNRQ92752 1358 aa23.56■■□□□ 1.36
BRAT1-202ENST00000421712 UNC13BO14795 1591 aa23.56■■□□□ 1.36
BRAT1-202ENST00000421712 LMTK3Q96Q04 1460 aa23.56■■□□□ 1.36
BRAT1-202ENST00000421712 VWDEQ8N2E2 1590 aa23.55■■□□□ 1.36
BRAT1-202ENST00000421712 LMTK2Q8IWU2 1503 aa23.54■■□□□ 1.36
BRAT1-202ENST00000421712 ARHGAP31Q2M1Z3 1444 aa23.52■■□□□ 1.36
BRAT1-202ENST00000421712 ERVK-7P63135 1459 aa23.49■■□□□ 1.35
BRAT1-202ENST00000421712 SETD5Q9C0A6 1442 aa23.49■■□□□ 1.35
BRAT1-202ENST00000421712 EFCAB6Q5THR3 1501 aa23.48■■□□□ 1.35
BRAT1-202ENST00000421712 IQGAP3Q86VI3 1631 aa23.47■■□□□ 1.35
BRAT1-202ENST00000421712 TET3O43151 1660 aa23.47■■□□□ 1.35
BRAT1-202ENST00000421712 SPATA31D1Q6ZQQ2 1576 aa23.46■■□□□ 1.35
BRAT1-202ENST00000421712 MYO3AQ8NEV4 1616 aa23.46■■□□□ 1.35
BRAT1-202ENST00000421712 SLC4A1APQ9BWU0 796 aaKnown RBP23.44■■□□□ 1.34
BRAT1-202ENST00000421712 STAG3Q9UJ98 1225 aa23.43■■□□□ 1.34
BRAT1-202ENST00000421712 CEP170BQ9Y4F5 1589 aaPredicted RBP23.43■■□□□ 1.34
BRAT1-202ENST00000421712 A2ML1A8K2U0 1454 aa23.43■■□□□ 1.34
BRAT1-202ENST00000421712 RPRD2Q5VT52 1461 aaKnown RBP23.43■■□□□ 1.34
BRAT1-202ENST00000421712 NLRP1Q9C000 1473 aa23.43■■□□□ 1.34
BRAT1-202ENST00000421712 ACIN1Q9UKV3 1341 aaKnown RBP23.41■■□□□ 1.34
BRAT1-202ENST00000421712 RAB3GAP2Q9H2M9 1393 aa23.4■■□□□ 1.34
BRAT1-202ENST00000421712 THEMISQ8N1K5 641 aaPredicted RBP23.4■■□□□ 1.34
BRAT1-202ENST00000421712 PKD2Q13563 968 aa23.39■■□□□ 1.33
BRAT1-202ENST00000421712 E9PCH4 1651 aa23.38■■□□□ 1.33
BRAT1-202ENST00000421712 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
BRAT1-202ENST00000421712 IDI1Q13907 227 aa23.38■■□□□ 1.33
BRAT1-202ENST00000421712 NOS1P29475 1434 aa23.38■■□□□ 1.33
BRAT1-202ENST00000421712 ZNF142P52746 1687 aaPredicted RBP23.38■■□□□ 1.33
BRAT1-202ENST00000421712 SLC52A1Q9NWF4 448 aa23.37■■□□□ 1.33
BRAT1-202ENST00000421712 UGGT1Q9NYU2 1555 aa23.36■■□□□ 1.33
BRAT1-202ENST00000421712 MPHOSPH9Q99550 1183 aa23.36■■□□□ 1.33
BRAT1-202ENST00000421712 CHGAP10645 457 aaKnown RBP23.34■■□□□ 1.33
BRAT1-202ENST00000421712 NCKAP5LQ9HCH0 1330 aa23.33■■□□□ 1.33
BRAT1-202ENST00000421712 SYNMO15061 1565 aa23.33■■□□□ 1.33
BRAT1-202ENST00000421712 DMRT2Q9Y5R5 561 aa23.32■■□□□ 1.32
BRAT1-202ENST00000421712 FOXD1Q16676 465 aa23.31■■□□□ 1.32
BRAT1-202ENST00000421712 HRCP23327 699 aa23.3■■□□□ 1.32
BRAT1-202ENST00000421712 ANKLE2Q86XL3 938 aa23.3■■□□□ 1.32
BRAT1-202ENST00000421712 PIK3C2BO00750 1634 aa23.29■■□□□ 1.32
BRAT1-202ENST00000421712 PLA2R1Q13018 1463 aa23.27■■□□□ 1.32
BRAT1-202ENST00000421712 STRCQ7RTU9 1775 aa23.27■■□□□ 1.32
BRAT1-202ENST00000421712 UBR1Q8IWV7 1749 aa23.26■■□□□ 1.31
BRAT1-202ENST00000421712 SPHKAPQ2M3C7 1700 aa23.25■■□□□ 1.31
BRAT1-202ENST00000421712 EID1Q9Y6B2 187 aa23.25■■□□□ 1.31
BRAT1-202ENST00000421712 PTPRTO14522 1441 aa23.25■■□□□ 1.31
BRAT1-202ENST00000421712 TXNDC2Q86VQ3 553 aa23.24■■□□□ 1.31
BRAT1-202ENST00000421712 ADGRB3O60242 1522 aa23.21■■□□□ 1.31
BRAT1-202ENST00000421712 TMEM2Q9UHN6 1383 aa23.2■■□□□ 1.3
BRAT1-202ENST00000421712 HDGFP51858 240 aaKnown RBP23.19■■□□□ 1.3
BRAT1-202ENST00000421712 ZNF326Q5BKZ1 582 aaKnown RBP23.19■■□□□ 1.3
BRAT1-202ENST00000421712 LTKP29376 864 aa23.18■■□□□ 1.3
BRAT1-202ENST00000421712 TRPM2O94759 1503 aa23.18■■□□□ 1.3
BRAT1-202ENST00000421712 KDM5AP29375 1690 aaKnown RBP23.17■■□□□ 1.3
BRAT1-202ENST00000421712 PPP1R15AO75807 674 aaPredicted RBP23.16■■□□□ 1.3
BRAT1-202ENST00000421712 BCANQ96GW7 911 aa23.16■■□□□ 1.3
BRAT1-202ENST00000421712 POLR1AO95602 1720 aaPredicted RBP23.16■■□□□ 1.3
BRAT1-202ENST00000421712 TMEM131LA2VDJ0 1609 aa23.15■■□□□ 1.3
BRAT1-202ENST00000421712 MYO5BQ9ULV0 1848 aa23.15■■□□□ 1.3
BRAT1-202ENST00000421712 SLIT1O75093 1534 aa23.15■■□□□ 1.3
BRAT1-202ENST00000421712 SCAF11Q99590 1463 aaKnown RBP23.15■■□□□ 1.3
BRAT1-202ENST00000421712 CLTCL1P53675 1640 aa23.15■■□□□ 1.3
BRAT1-202ENST00000421712 ARHGAP23Q9P227 1491 aa23.14■■□□□ 1.29
BRAT1-202ENST00000421712 NUTM2DQ5VT03 806 aaPredicted RBP23.14■■□□□ 1.29
BRAT1-202ENST00000421712 SENP3Q9H4L4 574 aaPredicted RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms