RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 DEPDC5O75140 1603 aa17.62■□□□□ 0.41
CAST-208ENST00000421689 MLECQ14165 292 aa17.62■□□□□ 0.41
CAST-208ENST00000421689 GGT6Q6P531 493 aa17.62■□□□□ 0.41
CAST-208ENST00000421689 PCGF6Q9BYE7 350 aa17.62■□□□□ 0.41
CAST-208ENST00000421689 PPP6R1Q9UPN7 881 aa17.6■□□□□ 0.41
CAST-208ENST00000421689 ACIN1Q9UKV3 1341 aaKnown RBP17.6■□□□□ 0.41
CAST-208ENST00000421689 UNC13BO14795 1591 aa17.6■□□□□ 0.41
CAST-208ENST00000421689 RAB3GAP2Q9H2M9 1393 aa17.59■□□□□ 0.41
CAST-208ENST00000421689 MROH1Q8NDA8 1641 aa17.58■□□□□ 0.41
CAST-208ENST00000421689 PRDM15P57071 1507 aaPredicted RBP17.58■□□□□ 0.41
CAST-208ENST00000421689 HRCP23327 699 aa17.58■□□□□ 0.4
CAST-208ENST00000421689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.58■□□□□ 0.49e-7■■■■□ 19.8
CAST-208ENST00000421689 KANK1Q14678 1352 aa17.57■□□□□ 0.4
CAST-208ENST00000421689 ADAMTSL3P82987 1691 aa17.57■□□□□ 0.4
CAST-208ENST00000421689 ESF1Q9H501 851 aaKnown RBP17.56■□□□□ 0.4
CAST-208ENST00000421689 FAM135AQ9P2D6 1515 aa17.56■□□□□ 0.4
CAST-208ENST00000421689 FER1L4A9Z1Z3 1794 aa17.55■□□□□ 0.4
CAST-208ENST00000421689 ZC3H13Q5T200 1668 aaKnown RBP17.55■□□□□ 0.4
CAST-208ENST00000421689 WASHC2CQ9Y4E1 1318 aa17.54■□□□□ 0.4
CAST-208ENST00000421689 KDM5DQ9BY66 1539 aa17.54■□□□□ 0.4
CAST-208ENST00000421689 TRIM52Q96A61 297 aa17.54■□□□□ 0.4
CAST-208ENST00000421689 NUP155O75694 1391 aa17.53■□□□□ 0.4
CAST-208ENST00000421689 VWDEQ8N2E2 1590 aa17.53■□□□□ 0.4
CAST-208ENST00000421689 CLTCQ00610 1675 aaKnown RBP17.53■□□□□ 0.4
CAST-208ENST00000421689 IQGAP3Q86VI3 1631 aa17.53■□□□□ 0.4
CAST-208ENST00000421689 MADDQ8WXG6 1647 aa17.53■□□□□ 0.4
CAST-208ENST00000421689 CEP152O94986 1710 aa17.52■□□□□ 0.4
CAST-208ENST00000421689 CNTLNQ9NXG0 1405 aa17.52■□□□□ 0.4
CAST-208ENST00000421689 ABCC3O15438 1527 aa17.52■□□□□ 0.39
CAST-208ENST00000421689 MROH2AA6NES4 1674 aa17.5■□□□□ 0.39
CAST-208ENST00000421689 LMTK2Q8IWU2 1503 aa17.5■□□□□ 0.39
CAST-208ENST00000421689 RIMS1Q86UR5 1692 aaKnown RBP17.49■□□□□ 0.39
CAST-208ENST00000421689 CAMSAP1Q5T5Y3 1602 aa17.48■□□□□ 0.39
CAST-208ENST00000421689 TET3O43151 1660 aa17.48■□□□□ 0.39
CAST-208ENST00000421689 KDM4FA0A1W2PPD8 638 aa17.47■□□□□ 0.39
CAST-208ENST00000421689 PZPP20742 1482 aa17.46■□□□□ 0.39
CAST-208ENST00000421689 ZMYM3Q14202 1370 aa17.45■□□□□ 0.38
CAST-208ENST00000421689 SLC4A1APQ9BWU0 796 aaKnown RBP17.45■□□□□ 0.38
CAST-208ENST00000421689 EFCAB6Q5THR3 1501 aa17.44■□□□□ 0.38
CAST-208ENST00000421689 MPHOSPH9Q99550 1183 aa17.44■□□□□ 0.38
CAST-208ENST00000421689 C3P01024 1663 aa17.44■□□□□ 0.38
CAST-208ENST00000421689 ARHGAP31Q2M1Z3 1444 aa17.43■□□□□ 0.38
CAST-208ENST00000421689 E9PCH4 1651 aa17.42■□□□□ 0.38
CAST-208ENST00000421689 PTPRMP28827 1452 aa17.42■□□□□ 0.38
CAST-208ENST00000421689 RPRD2Q5VT52 1461 aaKnown RBP17.41■□□□□ 0.38
CAST-208ENST00000421689 PKD2Q13563 968 aa17.4■□□□□ 0.38
CAST-208ENST00000421689 CFAP65Q6ZU64 1925 aaKnown RBP17.4■□□□□ 0.38
CAST-208ENST00000421689 NPATQ14207 1427 aa17.39■□□□□ 0.38
CAST-208ENST00000421689 CEBPAP49715 358 aaPredicted RBP17.39■□□□□ 0.37
CAST-208ENST00000421689 PREX1Q8TCU6 1659 aa17.38■□□□□ 0.37
CAST-208ENST00000421689 PLPPR3Q6T4P5 718 aa17.37■□□□□ 0.37
CAST-208ENST00000421689 FBXO31Q5XUX0 539 aaPredicted RBP17.36■□□□□ 0.37
CAST-208ENST00000421689 ERVK-7P63135 1459 aa17.35■□□□□ 0.37
CAST-208ENST00000421689 SPATA31D1Q6ZQQ2 1576 aa17.35■□□□□ 0.37
CAST-208ENST00000421689 SPHKAPQ2M3C7 1700 aa17.34■□□□□ 0.37
CAST-208ENST00000421689 NOS1P29475 1434 aa17.33■□□□□ 0.36
CAST-208ENST00000421689 DHX57Q6P158 1386 aaKnown RBP17.33■□□□□ 0.36
CAST-208ENST00000421689 FOXD1Q16676 465 aa17.33■□□□□ 0.36
CAST-208ENST00000421689 SETD1BQ9UPS6 1966 aaKnown RBP17.32■□□□□ 0.36
CAST-208ENST00000421689 PTPRTO14522 1441 aa17.31■□□□□ 0.36
CAST-208ENST00000421689 TNRQ92752 1358 aa17.3■□□□□ 0.36
CAST-208ENST00000421689 SYNMO15061 1565 aa17.29■□□□□ 0.36
CAST-208ENST00000421689 TRPM2O94759 1503 aa17.29■□□□□ 0.36
CAST-208ENST00000421689 SLC52A1Q9NWF4 448 aa17.28■□□□□ 0.36
CAST-208ENST00000421689 PLA2R1Q13018 1463 aa17.27■□□□□ 0.36
CAST-208ENST00000421689 ANKRD30BQ9BXX2 1392 aa17.27■□□□□ 0.35
CAST-208ENST00000421689 PIK3C2BO00750 1634 aa17.26■□□□□ 0.35
CAST-208ENST00000421689 MYO3AQ8NEV4 1616 aa17.25■□□□□ 0.35
CAST-208ENST00000421689 NLRP1Q9C000 1473 aa17.25■□□□□ 0.35
CAST-208ENST00000421689 IDI1Q13907 227 aa17.24■□□□□ 0.35
CAST-208ENST00000421689 CLTCL1P53675 1640 aa17.24■□□□□ 0.35
CAST-208ENST00000421689 UGGT1Q9NYU2 1555 aa17.23■□□□□ 0.35
CAST-208ENST00000421689 CCDC144AA2RUR9 1427 aa17.23■□□□□ 0.35
CAST-208ENST00000421689 UHRF1BP1Q6BDS2 1440 aa17.22■□□□□ 0.35
CAST-208ENST00000421689 KIF1BO60333 1816 aa17.22■□□□□ 0.35
CAST-208ENST00000421689 ZNF142P52746 1687 aaPredicted RBP17.21■□□□□ 0.35
CAST-208ENST00000421689 A2ML1A8K2U0 1454 aa17.21■□□□□ 0.35
CAST-208ENST00000421689 CCER1Q8TC90 406 aaPredicted RBP17.21■□□□□ 0.35
CAST-208ENST00000421689 KDM5AP29375 1690 aaKnown RBP17.2■□□□□ 0.34
CAST-208ENST00000421689 CEP170BQ9Y4F5 1589 aaPredicted RBP17.2■□□□□ 0.34
CAST-208ENST00000421689 STAG3Q9UJ98 1225 aa17.19■□□□□ 0.34
CAST-208ENST00000421689 CLSPNQ9HAW4 1339 aa17.19■□□□□ 0.34
CAST-208ENST00000421689 UBR1Q8IWV7 1749 aa17.18■□□□□ 0.34
CAST-208ENST00000421689 TMEM131LA2VDJ0 1609 aa17.18■□□□□ 0.34
CAST-208ENST00000421689 ADGRB3O60242 1522 aa17.17■□□□□ 0.34
CAST-208ENST00000421689 CHGAP10645 457 aaKnown RBP17.17■□□□□ 0.34
CAST-208ENST00000421689 MYO5BQ9ULV0 1848 aa17.17■□□□□ 0.34
CAST-208ENST00000421689 THEMISQ8N1K5 641 aaPredicted RBP17.15■□□□□ 0.34
CAST-208ENST00000421689 SIN3AQ96ST3 1273 aa17.15■□□□□ 0.34
CAST-208ENST00000421689 NEURL4Q96JN8 1562 aa17.15■□□□□ 0.34
CAST-208ENST00000421689 LMTK3Q96Q04 1460 aa17.13■□□□□ 0.33
CAST-208ENST00000421689 SPATA31E1Q6ZUB1 1445 aa17.13■□□□□ 0.33
CAST-208ENST00000421689 NEUROD1Q13562 356 aa17.12■□□□□ 0.33
CAST-208ENST00000421689 ZNF326Q5BKZ1 582 aaKnown RBP17.11■□□□□ 0.33
CAST-208ENST00000421689 RGL3Q3MIN7 710 aa17.1■□□□□ 0.33
CAST-208ENST00000421689 TMEM2Q9UHN6 1383 aa17.09■□□□□ 0.33
CAST-208ENST00000421689 SLIT1O75093 1534 aa17.09■□□□□ 0.33
CAST-208ENST00000421689 RPGRIP1LQ68CZ1 1315 aa17.08■□□□□ 0.32
CAST-208ENST00000421689 HDGFP51858 240 aaKnown RBP17.08■□□□□ 0.32
CAST-208ENST00000421689 ARHGAP23Q9P227 1491 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms