RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 IQSEC2Q5JU85 1478 aa14.92□□□□□ -0.02
SCRN1-204ENST00000421434 TCOF1Q13428 1488 aaKnown RBP14.91□□□□□ -0.02
SCRN1-204ENST00000421434 A2ML1A8K2U0 1454 aa14.9□□□□□ -0.02
SCRN1-204ENST00000421434 CAMSAP2Q08AD1 1489 aa14.9□□□□□ -0.02
SCRN1-204ENST00000421434 CCDC141Q6ZP82 1450 aa14.9□□□□□ -0.02
SCRN1-204ENST00000421434 TNRQ92752 1358 aa14.9□□□□□ -0.02
SCRN1-204ENST00000421434 SOCS7O14512 581 aa14.9□□□□□ -0.02
SCRN1-204ENST00000421434 SCAF1Q9H7N4 1312 aaKnown RBP14.89□□□□□ -0.03
SCRN1-204ENST00000421434 ZNF142P52746 1687 aaPredicted RBP14.88□□□□□ -0.03
SCRN1-204ENST00000421434 PIP4K2BP78356 416 aa14.88□□□□□ -0.03
SCRN1-204ENST00000421434 ANKLE2Q86XL3 938 aa14.88□□□□□ -0.03
SCRN1-204ENST00000421434 THEMISQ8N1K5 641 aaPredicted RBP14.88□□□□□ -0.03
SCRN1-204ENST00000421434 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.87□□□□□ -0.03
SCRN1-204ENST00000421434 KANK4Q5T7N3 995 aaPredicted RBP14.87□□□□□ -0.03
SCRN1-204ENST00000421434 DNMT1P26358 1616 aaKnown RBP14.87□□□□□ -0.03
SCRN1-204ENST00000421434 MIA2Q96PC5 1412 aa14.85□□□□□ -0.03
SCRN1-204ENST00000421434 PZPP20742 1482 aa14.84□□□□□ -0.03
SCRN1-204ENST00000421434 KDM5DQ9BY66 1539 aa14.84□□□□□ -0.03
SCRN1-204ENST00000421434 SPATA31D1Q6ZQQ2 1576 aa14.83□□□□□ -0.04
SCRN1-204ENST00000421434 LRRC9Q6ZRR7 1453 aa14.82□□□□□ -0.04
SCRN1-204ENST00000421434 TOM1O60784 492 aa14.82□□□□□ -0.04
SCRN1-204ENST00000421434 VPS8Q8N3P4 1428 aa14.82□□□□□ -0.04
SCRN1-204ENST00000421434 HSPA1LP34931 641 aa14.81□□□□□ -0.04
SCRN1-204ENST00000421434 SHANK2Q9UPX8 1470 aa14.8□□□□□ -0.04
SCRN1-204ENST00000421434 ARHGEF5Q12774 1597 aa14.8□□□□□ -0.04
SCRN1-204ENST00000421434 UGGT1Q9NYU2 1555 aa14.79□□□□□ -0.04
SCRN1-204ENST00000421434 NEURL4Q96JN8 1562 aa14.78□□□□□ -0.04
SCRN1-204ENST00000421434 FAM135AQ9P2D6 1515 aa14.78□□□□□ -0.04
SCRN1-204ENST00000421434 NLRP1Q9C000 1473 aa14.78□□□□□ -0.04
SCRN1-204ENST00000421434 NPHP4O75161 1426 aaPredicted RBP14.77□□□□□ -0.04
SCRN1-204ENST00000421434 SENP3Q9H4L4 574 aaPredicted RBP14.77□□□□□ -0.05
SCRN1-204ENST00000421434 RRP7BPQ9NSQ0 103 aa14.77□□□□□ -0.05
SCRN1-204ENST00000421434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCRN1-204ENST00000421434 CPS1P31327 1500 aa14.76□□□□□ -0.05
SCRN1-204ENST00000421434 ABCC3O15438 1527 aa14.75□□□□□ -0.05
SCRN1-204ENST00000421434 POLR1AO95602 1720 aaPredicted RBP14.75□□□□□ -0.05
SCRN1-204ENST00000421434 MYOM3Q5VTT5 1437 aa14.75□□□□□ -0.05
SCRN1-204ENST00000421434 APLP2Q06481 763 aa14.74□□□□□ -0.05
SCRN1-204ENST00000421434 MED14O60244 1454 aa14.73□□□□□ -0.05
SCRN1-204ENST00000421434 VWDEQ8N2E2 1590 aa14.73□□□□□ -0.05
SCRN1-204ENST00000421434 ERVK-7P63135 1459 aa14.72□□□□□ -0.05
SCRN1-204ENST00000421434 LTKP29376 864 aa14.72□□□□□ -0.05
SCRN1-204ENST00000421434 TXNDC2Q86VQ3 553 aa14.72□□□□□ -0.05
SCRN1-204ENST00000421434 CFAP65Q6ZU64 1925 aaKnown RBP14.72□□□□□ -0.05
SCRN1-204ENST00000421434 MAST1Q9Y2H9 1570 aa14.72□□□□□ -0.05
SCRN1-204ENST00000421434 RNF17Q9BXT8 1623 aaKnown RBP14.71□□□□□ -0.05
SCRN1-204ENST00000421434 CHIC2Q9UKJ5 165 aa14.71□□□□□ -0.05
SCRN1-204ENST00000421434 KIF15Q9NS87 1388 aa14.71□□□□□ -0.06
SCRN1-204ENST00000421434 MAP3K1Q13233 1512 aa14.7□□□□□ -0.06
SCRN1-204ENST00000421434 ABCC5O15440 1437 aa14.69□□□□□ -0.06
SCRN1-204ENST00000421434 DUOX2Q9NRD8 1548 aa14.69□□□□□ -0.06
SCRN1-204ENST00000421434 DEPDC5O75140 1603 aa14.69□□□□□ -0.06
SCRN1-204ENST00000421434 STAG3Q9UJ98 1225 aa14.68□□□□□ -0.06
SCRN1-204ENST00000421434 EID1Q9Y6B2 187 aa14.68□□□□□ -0.06
SCRN1-204ENST00000421434 MROH1Q8NDA8 1641 aa14.67□□□□□ -0.06
SCRN1-204ENST00000421434 IQGAP1P46940 1657 aa14.67□□□□□ -0.06
SCRN1-204ENST00000421434 LRRC7Q96NW7 1537 aa14.66□□□□□ -0.06
SCRN1-204ENST00000421434 EIF2AK4Q9P2K8 1649 aaKnown RBP14.66□□□□□ -0.06
SCRN1-204ENST00000421434 ZC3H13Q5T200 1668 aaKnown RBP14.66□□□□□ -0.06
SCRN1-204ENST00000421434 PHF23Q9BUL5 403 aaPredicted RBP14.65□□□□□ -0.06
SCRN1-204ENST00000421434 CEP152O94986 1710 aa14.65□□□□□ -0.06
SCRN1-204ENST00000421434 SCAF11Q99590 1463 aaKnown RBP14.64□□□□□ -0.07
SCRN1-204ENST00000421434 IDI1Q13907 227 aa14.64□□□□□ -0.07
SCRN1-204ENST00000421434 ALKQ9UM73 1620 aa14.63□□□□□ -0.07
SCRN1-204ENST00000421434 KANK1Q14678 1352 aa14.63□□□□□ -0.07
SCRN1-204ENST00000421434 STRCP1A6NGW2 1772 aa14.63□□□□□ -0.07
SCRN1-204ENST00000421434 DAPK1P53355 1430 aa14.63□□□□□ -0.07
SCRN1-204ENST00000421434 ARHGAP31Q2M1Z3 1444 aa14.63□□□□□ -0.07
SCRN1-204ENST00000421434 ERBINQ96RT1 1412 aa14.63□□□□□ -0.07
SCRN1-204ENST00000421434 MED1Q15648 1581 aaPredicted RBP14.63□□□□□ -0.07
SCRN1-204ENST00000421434 UBR1Q8IWV7 1749 aa14.62□□□□□ -0.07
SCRN1-204ENST00000421434 PTPN23Q9H3S7 1636 aa14.62□□□□□ -0.07
SCRN1-204ENST00000421434 ANKRD30AQ9BXX3 1397 aa14.61□□□□□ -0.07
SCRN1-204ENST00000421434 FGD6Q6ZV73 1430 aa14.61□□□□□ -0.07
SCRN1-204ENST00000421434 SLC26A8Q96RN1 970 aa14.61□□□□□ -0.07
SCRN1-204ENST00000421434 TMEM2Q9UHN6 1383 aa14.6□□□□□ -0.07
SCRN1-204ENST00000421434 FAM50AQ14320 339 aaKnown RBP14.6□□□□□ -0.07
SCRN1-204ENST00000421434 RBM33Q96EV2 1170 aaKnown RBP14.6□□□□□ -0.07
SCRN1-204ENST00000421434 ARHGAP23Q9P227 1491 aa14.6□□□□□ -0.07
SCRN1-204ENST00000421434 PRDM15P57071 1507 aaPredicted RBP14.6□□□□□ -0.07
SCRN1-204ENST00000421434 BCANQ96GW7 911 aa14.59□□□□□ -0.07
SCRN1-204ENST00000421434 SLIT1O75093 1534 aa14.59□□□□□ -0.07
SCRN1-204ENST00000421434 PROSER2Q86WR7 435 aaPredicted RBP14.57□□□□□ -0.08
SCRN1-204ENST00000421434 KCNA6P17658 529 aa14.56□□□□□ -0.08
SCRN1-204ENST00000421434 PIK3C2BO00750 1634 aa14.55□□□□□ -0.08
SCRN1-204ENST00000421434 CROCC2H7BZ55 1655 aa14.55□□□□□ -0.08
SCRN1-204ENST00000421434 TMEM94Q12767 1356 aa14.54□□□□□ -0.08
SCRN1-204ENST00000421434 SYNMO15061 1565 aa14.54□□□□□ -0.08
SCRN1-204ENST00000421434 EFCAB6Q5THR3 1501 aa14.53□□□□□ -0.08
SCRN1-204ENST00000421434 SLC52A1Q9NWF4 448 aa14.53□□□□□ -0.08
SCRN1-204ENST00000421434 RGS17Q9UGC6 210 aaPredicted RBP14.52□□□□□ -0.09
SCRN1-204ENST00000421434 LMTK2Q8IWU2 1503 aa14.51□□□□□ -0.09
SCRN1-204ENST00000421434 NOS1P29475 1434 aa14.5□□□□□ -0.09
SCRN1-204ENST00000421434 PPP1R15AO75807 674 aaPredicted RBP14.5□□□□□ -0.09
SCRN1-204ENST00000421434 CHGAP10645 457 aaKnown RBP14.5□□□□□ -0.09
SCRN1-204ENST00000421434 FAM135BQ49AJ0 1406 aa14.49□□□□□ -0.09
SCRN1-204ENST00000421434 ANKRD50Q9ULJ7 1429 aa14.49□□□□□ -0.09
SCRN1-204ENST00000421434 XIRP1Q702N8 1843 aaKnown RBP14.49□□□□□ -0.09
SCRN1-204ENST00000421434 NUTM2DQ5VT03 806 aaPredicted RBP14.48□□□□□ -0.09
SCRN1-204ENST00000421434 TET3O43151 1660 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms