RNA–Protein interactions for RNA: ENST00000420964.1

FAAP20-208, Transcript of FA core complex associated protein 20, humanhuman

TSL 3

Gene FAAP20, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-208ENST00000420964 TRIM52Q96A61 297 aa18.22■□□□□ 0.51
FAAP20-208ENST00000420964 BCORL1Q5H9F3 1711 aa18.22■□□□□ 0.51
FAAP20-208ENST00000420964 ILDR1Q86SU0 546 aaPredicted RBP18.21■□□□□ 0.51
FAAP20-208ENST00000420964 REREQ9P2R6 1566 aa18.21■□□□□ 0.51
FAAP20-208ENST00000420964 RNF17Q9BXT8 1623 aaKnown RBP18.2■□□□□ 0.5
FAAP20-208ENST00000420964 PZPP20742 1482 aa18.2■□□□□ 0.5
FAAP20-208ENST00000420964 IQGAP3Q86VI3 1631 aa18.19■□□□□ 0.5
FAAP20-208ENST00000420964 ATP10AO60312 1499 aa18.19■□□□□ 0.5
FAAP20-208ENST00000420964 PRDM15P57071 1507 aaPredicted RBP18.18■□□□□ 0.5
FAAP20-208ENST00000420964 MROH1Q8NDA8 1641 aa18.17■□□□□ 0.5
FAAP20-208ENST00000420964 FAM135AQ9P2D6 1515 aa18.17■□□□□ 0.5
FAAP20-208ENST00000420964 NUP155O75694 1391 aa18.17■□□□□ 0.5
FAAP20-208ENST00000420964 ADAMTSL3P82987 1691 aa18.16■□□□□ 0.5
FAAP20-208ENST00000420964 KIF3BO15066 747 aa18.14■□□□□ 0.49
FAAP20-208ENST00000420964 VWDEQ8N2E2 1590 aa18.13■□□□□ 0.49
FAAP20-208ENST00000420964 SIGLEC1Q9BZZ2 1709 aa18.13■□□□□ 0.49
FAAP20-208ENST00000420964 MPHOSPH9Q99550 1183 aa18.13■□□□□ 0.49
FAAP20-208ENST00000420964 CLSPNQ9HAW4 1339 aa18.13■□□□□ 0.49
FAAP20-208ENST00000420964 AGLP35573 1532 aa18.13■□□□□ 0.49
FAAP20-208ENST00000420964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.11■□□□□ 0.49
FAAP20-208ENST00000420964 SLC4A1APQ9BWU0 796 aaKnown RBP18.11■□□□□ 0.49
FAAP20-208ENST00000420964 PTPRMP28827 1452 aa18.1■□□□□ 0.49
FAAP20-208ENST00000420964 KANK1Q14678 1352 aa18.1■□□□□ 0.49
FAAP20-208ENST00000420964 TET3O43151 1660 aa18.09■□□□□ 0.49
FAAP20-208ENST00000420964 CEP152O94986 1710 aa18.09■□□□□ 0.49
FAAP20-208ENST00000420964 ZC3H13Q5T200 1668 aaKnown RBP18.07■□□□□ 0.48
FAAP20-208ENST00000420964 MADDQ8WXG6 1647 aa18.06■□□□□ 0.48
FAAP20-208ENST00000420964 ARID4BQ4LE39 1312 aaPredicted RBP18.06■□□□□ 0.48
FAAP20-208ENST00000420964 LMTK2Q8IWU2 1503 aa18.06■□□□□ 0.48
FAAP20-208ENST00000420964 ABCC3O15438 1527 aa18.05■□□□□ 0.48
FAAP20-208ENST00000420964 EFCAB6Q5THR3 1501 aa18.04■□□□□ 0.48
FAAP20-208ENST00000420964 E9PCH4 1651 aa18.04■□□□□ 0.48
FAAP20-208ENST00000420964 PKD2Q13563 968 aa18.04■□□□□ 0.48
FAAP20-208ENST00000420964 FOXD1Q16676 465 aa18.03■□□□□ 0.48
FAAP20-208ENST00000420964 GGT6Q6P531 493 aa18.03■□□□□ 0.48
FAAP20-208ENST00000420964 CAMSAP1Q5T5Y3 1602 aa18.02■□□□□ 0.48
FAAP20-208ENST00000420964 ZEB1P37275 1124 aaPredicted RBP18.02■□□□□ 0.48
FAAP20-208ENST00000420964 ANKRD30BQ9BXX2 1392 aa18.01■□□□□ 0.47
FAAP20-208ENST00000420964 RIMS1Q86UR5 1692 aaKnown RBP17.99■□□□□ 0.47
FAAP20-208ENST00000420964 SPHKAPQ2M3C7 1700 aa17.98■□□□□ 0.47
FAAP20-208ENST00000420964 WASHC2CQ9Y4E1 1318 aa17.97■□□□□ 0.47
FAAP20-208ENST00000420964 CLTCQ00610 1675 aaKnown RBP17.96■□□□□ 0.47
FAAP20-208ENST00000420964 RPRD2Q5VT52 1461 aaKnown RBP17.96■□□□□ 0.47
FAAP20-208ENST00000420964 PLPPR3Q6T4P5 718 aa17.96■□□□□ 0.47
FAAP20-208ENST00000420964 LMTK3Q96Q04 1460 aa17.95■□□□□ 0.46
FAAP20-208ENST00000420964 MLECQ14165 292 aa17.95■□□□□ 0.46
FAAP20-208ENST00000420964 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
FAAP20-208ENST00000420964 TRPM2O94759 1503 aa17.94■□□□□ 0.46
FAAP20-208ENST00000420964 PPP6R1Q9UPN7 881 aa17.94■□□□□ 0.46
FAAP20-208ENST00000420964 PLA2R1Q13018 1463 aa17.94■□□□□ 0.46
FAAP20-208ENST00000420964 NPATQ14207 1427 aa17.93■□□□□ 0.46
FAAP20-208ENST00000420964 ARHGAP31Q2M1Z3 1444 aa17.92■□□□□ 0.46
FAAP20-208ENST00000420964 HSPA2P54652 639 aa17.92■□□□□ 0.46
FAAP20-208ENST00000420964 NEUROD1Q13562 356 aa17.92■□□□□ 0.46
FAAP20-208ENST00000420964 PTPRTO14522 1441 aa17.91■□□□□ 0.46
FAAP20-208ENST00000420964 CCDC144AA2RUR9 1427 aa17.9■□□□□ 0.46
FAAP20-208ENST00000420964 FER1L4A9Z1Z3 1794 aa17.9■□□□□ 0.46
FAAP20-208ENST00000420964 MROH2AA6NES4 1674 aa17.89■□□□□ 0.45
FAAP20-208ENST00000420964 PREX1Q8TCU6 1659 aa17.89■□□□□ 0.45
FAAP20-208ENST00000420964 CLTCL1P53675 1640 aa17.88■□□□□ 0.45
FAAP20-208ENST00000420964 TONSLQ96HA7 1378 aa17.88■□□□□ 0.45
FAAP20-208ENST00000420964 CNTLNQ9NXG0 1405 aa17.88■□□□□ 0.45
FAAP20-208ENST00000420964 CEBPAP49715 358 aaPredicted RBP17.87■□□□□ 0.45
FAAP20-208ENST00000420964 CFAP65Q6ZU64 1925 aaKnown RBP17.87■□□□□ 0.45
FAAP20-208ENST00000420964 SYNMO15061 1565 aa17.85■□□□□ 0.45
FAAP20-208ENST00000420964 NOS1P29475 1434 aa17.85■□□□□ 0.45
FAAP20-208ENST00000420964 ESF1Q9H501 851 aaKnown RBP17.85■□□□□ 0.45
FAAP20-208ENST00000420964 UGGT1Q9NYU2 1555 aa17.84■□□□□ 0.45
FAAP20-208ENST00000420964 TIMELESSQ9UNS1 1208 aa17.84■□□□□ 0.45
FAAP20-208ENST00000420964 ERVK-7P63135 1459 aa17.83■□□□□ 0.45
FAAP20-208ENST00000420964 PIK3C2BO00750 1634 aa17.83■□□□□ 0.44
FAAP20-208ENST00000420964 SPATA31D1Q6ZQQ2 1576 aa17.82■□□□□ 0.44
FAAP20-208ENST00000420964 FBXO41Q8TF61 875 aa17.81■□□□□ 0.44
FAAP20-208ENST00000420964 KIF1BO60333 1816 aa17.81■□□□□ 0.44
FAAP20-208ENST00000420964 C3P01024 1663 aa17.8■□□□□ 0.44
FAAP20-208ENST00000420964 ZMYM3Q14202 1370 aa17.79■□□□□ 0.44
FAAP20-208ENST00000420964 NEURL4Q96JN8 1562 aa17.79■□□□□ 0.44
FAAP20-208ENST00000420964 SPATA31E1Q6ZUB1 1445 aa17.78■□□□□ 0.44
FAAP20-208ENST00000420964 ADGRB3O60242 1522 aa17.77■□□□□ 0.43
FAAP20-208ENST00000420964 FBXO31Q5XUX0 539 aaPredicted RBP17.75■□□□□ 0.43
FAAP20-208ENST00000420964 L3MBTL2Q969R5 705 aa17.75■□□□□ 0.43
FAAP20-208ENST00000420964 TNRQ92752 1358 aa17.71■□□□□ 0.43
FAAP20-208ENST00000420964 PPP1R15AO75807 674 aaPredicted RBP17.71■□□□□ 0.43
FAAP20-208ENST00000420964 SLC52A1Q9NWF4 448 aa17.71■□□□□ 0.43
FAAP20-208ENST00000420964 IFT172Q9UG01 1749 aa17.7■□□□□ 0.42
FAAP20-208ENST00000420964 TMEM131LA2VDJ0 1609 aa17.7■□□□□ 0.42
FAAP20-208ENST00000420964 STRCQ7RTU9 1775 aa17.7■□□□□ 0.42
FAAP20-208ENST00000420964 MYO5BQ9ULV0 1848 aa17.7■□□□□ 0.42
FAAP20-208ENST00000420964 RGL3Q3MIN7 710 aa17.69■□□□□ 0.42
FAAP20-208ENST00000420964 PPLO60437 1756 aa17.67■□□□□ 0.42
FAAP20-208ENST00000420964 IDI1Q13907 227 aa17.67■□□□□ 0.42
FAAP20-208ENST00000420964 UHRF1BP1Q6BDS2 1440 aa17.66■□□□□ 0.42
FAAP20-208ENST00000420964 MYO3AQ8NEV4 1616 aa17.66■□□□□ 0.42
FAAP20-208ENST00000420964 CHGAP10645 457 aaKnown RBP17.66■□□□□ 0.42
FAAP20-208ENST00000420964 DCAF11Q8TEB1 546 aa17.66■□□□□ 0.42
FAAP20-208ENST00000420964 KDM5AP29375 1690 aaKnown RBP17.66■□□□□ 0.42
FAAP20-208ENST00000420964 NLRP1Q9C000 1473 aa17.65■□□□□ 0.42
FAAP20-208ENST00000420964 CERKQ8TCT0 537 aa17.65■□□□□ 0.42
FAAP20-208ENST00000420964 MYOM2P54296 1465 aa17.64■□□□□ 0.41
FAAP20-208ENST00000420964 SETD1BQ9UPS6 1966 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms