RNA–Protein interactions for RNA: ENST00000420410.5

LPP-204, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-204ENST00000420410 NCOA1Q15788 1441 aa29.32■■■□□ 2.28
LPP-204ENST00000420410 EIF2AK4Q9P2K8 1649 aaKnown RBP29.31■■■□□ 2.28
LPP-204ENST00000420410 WASHC2CQ9Y4E1 1318 aa29.31■■■□□ 2.28
LPP-204ENST00000420410 ITGAEP38570 1179 aa29.3■■■□□ 2.28
LPP-204ENST00000420410 PTPRKQ15262 1439 aa29.29■■■□□ 2.28
LPP-204ENST00000420410 ERBINQ96RT1 1412 aa29.29■■■□□ 2.28
LPP-204ENST00000420410 HSPA2P54652 639 aa29.29■■■□□ 2.28
LPP-204ENST00000420410 RNF17Q9BXT8 1623 aaKnown RBP29.29■■■□□ 2.28
LPP-204ENST00000420410 KDM5DQ9BY66 1539 aa29.29■■■□□ 2.28
LPP-204ENST00000420410 ADGRL2O95490 1459 aa29.29■■■□□ 2.28
LPP-204ENST00000420410 PREX1Q8TCU6 1659 aa29.26■■■□□ 2.27
LPP-204ENST00000420410 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.25■■■□□ 2.27
LPP-204ENST00000420410 UHRF1BP1Q6BDS2 1440 aa29.24■■■□□ 2.27
LPP-204ENST00000420410 SETD1BQ9UPS6 1966 aaKnown RBP29.24■■■□□ 2.27
LPP-204ENST00000420410 FAM135AQ9P2D6 1515 aa29.24■■■□□ 2.27
LPP-204ENST00000420410 NPATQ14207 1427 aa29.23■■■□□ 2.27
LPP-204ENST00000420410 RRBP1Q9P2E9 1410 aaKnown RBP29.22■■■□□ 2.27
LPP-204ENST00000420410 MROH1Q8NDA8 1641 aa29.22■■■□□ 2.27
LPP-204ENST00000420410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.21■■■□□ 2.27
LPP-204ENST00000420410 ABCC3O15438 1527 aa29.2■■■□□ 2.26
LPP-204ENST00000420410 FBXO31Q5XUX0 539 aaPredicted RBP29.17■■■□□ 2.26
LPP-204ENST00000420410 ANKRD50Q9ULJ7 1429 aa29.16■■■□□ 2.26
LPP-204ENST00000420410 PZPP20742 1482 aa29.16■■■□□ 2.26
LPP-204ENST00000420410 ROCK1Q13464 1354 aa29.15■■■□□ 2.26
LPP-204ENST00000420410 PRDM15P57071 1507 aaPredicted RBP29.15■■■□□ 2.26
LPP-204ENST00000420410 ZC3H13Q5T200 1668 aaKnown RBP29.14■■■□□ 2.26
LPP-204ENST00000420410 CEP152O94986 1710 aa29.13■■■□□ 2.25
LPP-204ENST00000420410 DEPDC5O75140 1603 aa29.12■■■□□ 2.25
LPP-204ENST00000420410 KANK1Q14678 1352 aa29.11■■■□□ 2.25
LPP-204ENST00000420410 TNRQ92752 1358 aa29.09■■■□□ 2.25
LPP-204ENST00000420410 MYO3AQ8NEV4 1616 aa29.09■■■□□ 2.25
LPP-204ENST00000420410 CAMSAP1Q5T5Y3 1602 aa29.07■■■□□ 2.24
LPP-204ENST00000420410 CEP170BQ9Y4F5 1589 aaPredicted RBP29.02■■■□□ 2.24
LPP-204ENST00000420410 VWDEQ8N2E2 1590 aa29.01■■■□□ 2.24
LPP-204ENST00000420410 ERVK-7P63135 1459 aa29■■■□□ 2.23
LPP-204ENST00000420410 ZNF142P52746 1687 aaPredicted RBP28.99■■■□□ 2.23
LPP-204ENST00000420410 CFAP65Q6ZU64 1925 aaKnown RBP28.98■■■□□ 2.23
LPP-204ENST00000420410 A2ML1A8K2U0 1454 aa28.98■■■□□ 2.23
LPP-204ENST00000420410 ARHGAP31Q2M1Z3 1444 aa28.98■■■□□ 2.23
LPP-204ENST00000420410 SPATA31D1Q6ZQQ2 1576 aa28.97■■■□□ 2.23
LPP-204ENST00000420410 LMTK2Q8IWU2 1503 aa28.97■■■□□ 2.23
LPP-204ENST00000420410 UNC13BO14795 1591 aa28.95■■■□□ 2.22
LPP-204ENST00000420410 STRCQ7RTU9 1775 aa28.95■■■□□ 2.22
LPP-204ENST00000420410 NLRP1Q9C000 1473 aa28.93■■■□□ 2.22
LPP-204ENST00000420410 EFCAB6Q5THR3 1501 aa28.91■■■□□ 2.22
LPP-204ENST00000420410 NAIPQ13075 1403 aa28.9■■■□□ 2.22
LPP-204ENST00000420410 NCKAP5LQ9HCH0 1330 aa28.89■■■□□ 2.21
LPP-204ENST00000420410 NUP155O75694 1391 aa28.88■■■□□ 2.21
LPP-204ENST00000420410 DMRT2Q9Y5R5 561 aa28.88■■■□□ 2.21
LPP-204ENST00000420410 UGGT1Q9NYU2 1555 aa28.86■■■□□ 2.21
LPP-204ENST00000420410 PLA2R1Q13018 1463 aa28.85■■■□□ 2.21
LPP-204ENST00000420410 TET3O43151 1660 aa28.85■■■□□ 2.21
LPP-204ENST00000420410 GCC2Q8IWJ2 1684 aa28.85■■■□□ 2.21
LPP-204ENST00000420410 HFM1A2PYH4 1435 aa28.85■■■□□ 2.21
LPP-204ENST00000420410 THEMISQ8N1K5 641 aaPredicted RBP28.83■■■□□ 2.21
LPP-204ENST00000420410 IQGAP3Q86VI3 1631 aa28.83■■■□□ 2.21
LPP-204ENST00000420410 RPRD2Q5VT52 1461 aaKnown RBP28.8■■■□□ 2.2
LPP-204ENST00000420410 PKD2Q13563 968 aa28.8■■■□□ 2.2
LPP-204ENST00000420410 PTPRTO14522 1441 aa28.79■■■□□ 2.2
LPP-204ENST00000420410 NOS1P29475 1434 aa28.79■■■□□ 2.2
LPP-204ENST00000420410 SYNMO15061 1565 aa28.79■■■□□ 2.2
LPP-204ENST00000420410 IDI1Q13907 227 aa28.76■■■□□ 2.19
LPP-204ENST00000420410 E9PCH4 1651 aa28.75■■■□□ 2.19
LPP-204ENST00000420410 ANKLE2Q86XL3 938 aa28.75■■■□□ 2.19
LPP-204ENST00000420410 STAG3Q9UJ98 1225 aa28.75■■■□□ 2.19
LPP-204ENST00000420410 TRIM52Q96A61 297 aa28.74■■■□□ 2.19
LPP-204ENST00000420410 UBR1Q8IWV7 1749 aa28.74■■■□□ 2.19
LPP-204ENST00000420410 PIK3C2BO00750 1634 aa28.73■■■□□ 2.19
LPP-204ENST00000420410 SLC52A1Q9NWF4 448 aa28.7■■■□□ 2.18
LPP-204ENST00000420410 POLR1AO95602 1720 aaPredicted RBP28.69■■■□□ 2.18
LPP-204ENST00000420410 NEURL4Q96JN8 1562 aa28.67■■■□□ 2.18
LPP-204ENST00000420410 TXNDC2Q86VQ3 553 aa28.62■■■□□ 2.17
LPP-204ENST00000420410 ADGRB3O60242 1522 aa28.62■■■□□ 2.17
LPP-204ENST00000420410 NPHP4O75161 1426 aaPredicted RBP28.61■■■□□ 2.17
LPP-204ENST00000420410 ARHGAP23Q9P227 1491 aa28.61■■■□□ 2.17
LPP-204ENST00000420410 SLIT1O75093 1534 aa28.61■■■□□ 2.17
LPP-204ENST00000420410 CHGAP10645 457 aaKnown RBP28.61■■■□□ 2.17
LPP-204ENST00000420410 LTKP29376 864 aa28.61■■■□□ 2.17
LPP-204ENST00000420410 TMEM2Q9UHN6 1383 aa28.61■■■□□ 2.17
LPP-204ENST00000420410 SCAF11Q99590 1463 aaKnown RBP28.6■■■□□ 2.17
LPP-204ENST00000420410 SLC4A1APQ9BWU0 796 aaKnown RBP28.6■■■□□ 2.17
LPP-204ENST00000420410 EID1Q9Y6B2 187 aa28.6■■■□□ 2.17
LPP-204ENST00000420410 ZNF335Q9H4Z2 1342 aaPredicted RBP28.6■■■□□ 2.17
LPP-204ENST00000420410 KDM5AP29375 1690 aaKnown RBP28.6■■■□□ 2.17
LPP-204ENST00000420410 CERKQ8TCT0 537 aa28.59■■■□□ 2.17
LPP-204ENST00000420410 SETD5Q9C0A6 1442 aa28.59■■■□□ 2.17
LPP-204ENST00000420410 MED14O60244 1454 aa28.59■■■□□ 2.17
LPP-204ENST00000420410 SPHKAPQ2M3C7 1700 aa28.55■■■□□ 2.16
LPP-204ENST00000420410 IQGAP1P46940 1657 aa28.55■■■□□ 2.16
LPP-204ENST00000420410 LTBP4Q8N2S1 1624 aa28.54■■■□□ 2.16
LPP-204ENST00000420410 TMEM131LA2VDJ0 1609 aa28.53■■■□□ 2.16
LPP-204ENST00000420410 MYO5BQ9ULV0 1848 aa28.52■■■□□ 2.16
LPP-204ENST00000420410 RAB3GAP2Q9H2M9 1393 aa28.51■■■□□ 2.16
LPP-204ENST00000420410 ILDR1Q86SU0 546 aaPredicted RBP28.51■■■□□ 2.15
LPP-204ENST00000420410 FOXD1Q16676 465 aa28.49■■■□□ 2.15
LPP-204ENST00000420410 MPHOSPH9Q99550 1183 aa28.48■■■□□ 2.15
LPP-204ENST00000420410 RIMS2Q9UQ26 1411 aa28.47■■■□□ 2.15
LPP-204ENST00000420410 SENP3Q9H4L4 574 aaPredicted RBP28.47■■■□□ 2.15
LPP-204ENST00000420410 TRPM2O94759 1503 aa28.47■■■□□ 2.15
LPP-204ENST00000420410 ZFYVE9O95405 1425 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms