RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 CNTLNQ9NXG0 1405 aa31.34■■■□□ 2.61
HMGXB4-203ENST00000420166 ESF1Q9H501 851 aaKnown RBP31.33■■■□□ 2.61
HMGXB4-203ENST00000420166 PPP6R1Q9UPN7 881 aa31.33■■■□□ 2.61
HMGXB4-203ENST00000420166 CLTCQ00610 1675 aaKnown RBP31.32■■■□□ 2.6
HMGXB4-203ENST00000420166 MROH1Q8NDA8 1641 aa31.32■■■□□ 2.6
HMGXB4-203ENST00000420166 FAM135AQ9P2D6 1515 aa31.32■■■□□ 2.6
HMGXB4-203ENST00000420166 ANKRD50Q9ULJ7 1429 aa31.32■■■□□ 2.6
HMGXB4-203ENST00000420166 MROH2AA6NES4 1674 aa31.32■■■□□ 2.6
HMGXB4-203ENST00000420166 DEPDC5O75140 1603 aa31.29■■■□□ 2.6
HMGXB4-203ENST00000420166 KDM5DQ9BY66 1539 aa31.28■■■□□ 2.6
HMGXB4-203ENST00000420166 C3P01024 1663 aa31.27■■■□□ 2.6
HMGXB4-203ENST00000420166 PRDM15P57071 1507 aaPredicted RBP31.27■■■□□ 2.6
HMGXB4-203ENST00000420166 ZC3H13Q5T200 1668 aaKnown RBP31.23■■■□□ 2.59
HMGXB4-203ENST00000420166 GCC2Q8IWJ2 1684 aa31.22■■■□□ 2.59
HMGXB4-203ENST00000420166 ABCC3O15438 1527 aa31.21■■■□□ 2.59
HMGXB4-203ENST00000420166 WASHC2CQ9Y4E1 1318 aa31.21■■■□□ 2.59
HMGXB4-203ENST00000420166 ZMYM3Q14202 1370 aa31.2■■■□□ 2.59
HMGXB4-203ENST00000420166 CEBPAP49715 358 aaPredicted RBP31.2■■■□□ 2.59
HMGXB4-203ENST00000420166 PLPPR3Q6T4P5 718 aa31.2■■■□□ 2.59
HMGXB4-203ENST00000420166 CEP152O94986 1710 aa31.2■■■□□ 2.58
HMGXB4-203ENST00000420166 NAIPQ13075 1403 aa31.18■■■□□ 2.58
HMGXB4-203ENST00000420166 HFM1A2PYH4 1435 aa31.17■■■□□ 2.58
HMGXB4-203ENST00000420166 UNC13BO14795 1591 aa31.16■■■□□ 2.58
HMGXB4-203ENST00000420166 VWDEQ8N2E2 1590 aa31.16■■■□□ 2.58
HMGXB4-203ENST00000420166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.15■■■□□ 2.581e-6■■□□□ 12.6
HMGXB4-203ENST00000420166 KANK1Q14678 1352 aa31.15■■■□□ 2.58
HMGXB4-203ENST00000420166 SETD1BQ9UPS6 1966 aaKnown RBP31.12■■■□□ 2.57
HMGXB4-203ENST00000420166 CAMSAP1Q5T5Y3 1602 aa31.12■■■□□ 2.57
HMGXB4-203ENST00000420166 PZPP20742 1482 aa31.09■■■□□ 2.57
HMGXB4-203ENST00000420166 NPATQ14207 1427 aa31.09■■■□□ 2.57
HMGXB4-203ENST00000420166 LMTK2Q8IWU2 1503 aa31.08■■■□□ 2.57
HMGXB4-203ENST00000420166 PREX1Q8TCU6 1659 aa31.05■■■□□ 2.56
HMGXB4-203ENST00000420166 IQGAP3Q86VI3 1631 aa31.03■■■□□ 2.56
HMGXB4-203ENST00000420166 ARHGAP31Q2M1Z3 1444 aa31.02■■■□□ 2.56
HMGXB4-203ENST00000420166 CFAP65Q6ZU64 1925 aaKnown RBP31■■■□□ 2.55
HMGXB4-203ENST00000420166 TET3O43151 1660 aa31■■■□□ 2.55
HMGXB4-203ENST00000420166 EFCAB6Q5THR3 1501 aa31■■■□□ 2.55
HMGXB4-203ENST00000420166 LMTK3Q96Q04 1460 aa30.99■■■□□ 2.55
HMGXB4-203ENST00000420166 NUP155O75694 1391 aa30.98■■■□□ 2.55
HMGXB4-203ENST00000420166 FBXO31Q5XUX0 539 aaPredicted RBP30.98■■■□□ 2.55
HMGXB4-203ENST00000420166 UHRF1BP1Q6BDS2 1440 aa30.96■■■□□ 2.55
HMGXB4-203ENST00000420166 SPATA31D1Q6ZQQ2 1576 aa30.96■■■□□ 2.55
HMGXB4-203ENST00000420166 ERVK-7P63135 1459 aa30.95■■■□□ 2.55
HMGXB4-203ENST00000420166 MYO3AQ8NEV4 1616 aa30.95■■■□□ 2.55
HMGXB4-203ENST00000420166 TNRQ92752 1358 aa30.94■■■□□ 2.54
HMGXB4-203ENST00000420166 SETD5Q9C0A6 1442 aa30.93■■■□□ 2.54
HMGXB4-203ENST00000420166 ZNF142P52746 1687 aaPredicted RBP30.9■■■□□ 2.54
HMGXB4-203ENST00000420166 RPRD2Q5VT52 1461 aaKnown RBP30.89■■■□□ 2.54
HMGXB4-203ENST00000420166 E9PCH4 1651 aa30.89■■■□□ 2.54
HMGXB4-203ENST00000420166 CEP170BQ9Y4F5 1589 aaPredicted RBP30.85■■■□□ 2.53
HMGXB4-203ENST00000420166 TRIM52Q96A61 297 aa30.85■■■□□ 2.53
HMGXB4-203ENST00000420166 NLRP1Q9C000 1473 aa30.84■■■□□ 2.53
HMGXB4-203ENST00000420166 RAB3GAP2Q9H2M9 1393 aa30.83■■■□□ 2.53
HMGXB4-203ENST00000420166 A2ML1A8K2U0 1454 aa30.82■■■□□ 2.53
HMGXB4-203ENST00000420166 NOS1P29475 1434 aa30.82■■■□□ 2.52
HMGXB4-203ENST00000420166 SYNMO15061 1565 aa30.8■■■□□ 2.52
HMGXB4-203ENST00000420166 HSPA2P54652 639 aa30.8■■■□□ 2.52
HMGXB4-203ENST00000420166 ACIN1Q9UKV3 1341 aaKnown RBP30.78■■■□□ 2.52
HMGXB4-203ENST00000420166 TRIM26Q12899 539 aaPredicted RBP30.74■■■□□ 2.51
HMGXB4-203ENST00000420166 SLC4A1APQ9BWU0 796 aaKnown RBP30.73■■■□□ 2.51
HMGXB4-203ENST00000420166 SPHKAPQ2M3C7 1700 aa30.72■■■□□ 2.51
HMGXB4-203ENST00000420166 UGGT1Q9NYU2 1555 aa30.71■■■□□ 2.51
HMGXB4-203ENST00000420166 PIK3C2BO00750 1634 aa30.7■■■□□ 2.51
HMGXB4-203ENST00000420166 HRCP23327 699 aa30.69■■■□□ 2.5
HMGXB4-203ENST00000420166 PKD2Q13563 968 aa30.69■■■□□ 2.5
HMGXB4-203ENST00000420166 UBR1Q8IWV7 1749 aa30.68■■■□□ 2.5
HMGXB4-203ENST00000420166 PTPRTO14522 1441 aa30.67■■■□□ 2.5
HMGXB4-203ENST00000420166 SLC52A1Q9NWF4 448 aa30.66■■■□□ 2.5
HMGXB4-203ENST00000420166 PLA2R1Q13018 1463 aa30.65■■■□□ 2.5
HMGXB4-203ENST00000420166 STRCQ7RTU9 1775 aa30.65■■■□□ 2.5
HMGXB4-203ENST00000420166 IDI1Q13907 227 aa30.65■■■□□ 2.5
HMGXB4-203ENST00000420166 MPHOSPH9Q99550 1183 aa30.65■■■□□ 2.5
HMGXB4-203ENST00000420166 KDM5AP29375 1690 aaKnown RBP30.65■■■□□ 2.5
HMGXB4-203ENST00000420166 THEMISQ8N1K5 641 aaPredicted RBP30.62■■■□□ 2.49
HMGXB4-203ENST00000420166 ADGRB3O60242 1522 aa30.61■■■□□ 2.49
HMGXB4-203ENST00000420166 TRPM2O94759 1503 aa30.61■■■□□ 2.49
HMGXB4-203ENST00000420166 MYO5BQ9ULV0 1848 aa30.57■■■□□ 2.48
HMGXB4-203ENST00000420166 FOXD1Q16676 465 aa30.56■■■□□ 2.48
HMGXB4-203ENST00000420166 STAG3Q9UJ98 1225 aa30.56■■■□□ 2.48
HMGXB4-203ENST00000420166 POLR1AO95602 1720 aaPredicted RBP30.56■■■□□ 2.48
HMGXB4-203ENST00000420166 TMEM131LA2VDJ0 1609 aa30.55■■■□□ 2.48
HMGXB4-203ENST00000420166 CLTCL1P53675 1640 aa30.55■■■□□ 2.48
HMGXB4-203ENST00000420166 SLIT1O75093 1534 aa30.52■■■□□ 2.48
HMGXB4-203ENST00000420166 ARHGAP23Q9P227 1491 aa30.52■■■□□ 2.48
HMGXB4-203ENST00000420166 NCKAP5LQ9HCH0 1330 aa30.5■■■□□ 2.47
HMGXB4-203ENST00000420166 TMEM2Q9UHN6 1383 aa30.49■■■□□ 2.47
HMGXB4-203ENST00000420166 ANKLE2Q86XL3 938 aa30.48■■■□□ 2.47
HMGXB4-203ENST00000420166 NEURL4Q96JN8 1562 aa30.48■■■□□ 2.47
HMGXB4-203ENST00000420166 KIF1BO60333 1816 aa30.47■■■□□ 2.47
HMGXB4-203ENST00000420166 CHGAP10645 457 aaKnown RBP30.46■■■□□ 2.47
HMGXB4-203ENST00000420166 DMRT2Q9Y5R5 561 aa30.45■■■□□ 2.47
HMGXB4-203ENST00000420166 SCAF11Q99590 1463 aaKnown RBP30.44■■■□□ 2.46
HMGXB4-203ENST00000420166 CCDC144AA2RUR9 1427 aa30.41■■■□□ 2.46
HMGXB4-203ENST00000420166 MED14O60244 1454 aa30.41■■■□□ 2.46
HMGXB4-203ENST00000420166 ZFYVE9O95405 1425 aa30.39■■■□□ 2.46
HMGXB4-203ENST00000420166 LTKP29376 864 aa30.39■■■□□ 2.46
HMGXB4-203ENST00000420166 TXNDC2Q86VQ3 553 aa30.39■■■□□ 2.46
HMGXB4-203ENST00000420166 EID1Q9Y6B2 187 aa30.39■■■□□ 2.46
HMGXB4-203ENST00000420166 RIMS2Q9UQ26 1411 aa30.39■■■□□ 2.45
HMGXB4-203ENST00000420166 IQGAP1P46940 1657 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms