RNA–Protein interactions for RNA: ENST00000420162.6

CDRT15-201, CMT1A duplicated region transcript 15, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT15, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-201ENST00000420162 RNF17Q9BXT8 1623 aaKnown RBP22.67■■□□□ 1.22
CDRT15-201ENST00000420162 KDM4FA0A1W2PPD8 638 aa22.65■■□□□ 1.22
CDRT15-201ENST00000420162 ACIN1Q9UKV3 1341 aaKnown RBP22.63■■□□□ 1.21
CDRT15-201ENST00000420162 SETD5Q9C0A6 1442 aa22.63■■□□□ 1.21
CDRT15-201ENST00000420162 CNTLNQ9NXG0 1405 aa22.63■■□□□ 1.21
CDRT15-201ENST00000420162 KANK1Q14678 1352 aa22.63■■□□□ 1.21
CDRT15-201ENST00000420162 FAM135AQ9P2D6 1515 aa22.62■■□□□ 1.21
CDRT15-201ENST00000420162 WASHC2CQ9Y4E1 1318 aa22.62■■□□□ 1.21
CDRT15-201ENST00000420162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.62■■□□□ 1.21
CDRT15-201ENST00000420162 DEPDC5O75140 1603 aa22.61■■□□□ 1.21
CDRT15-201ENST00000420162 PRDM15P57071 1507 aaPredicted RBP22.6■■□□□ 1.21
CDRT15-201ENST00000420162 FER1L4A9Z1Z3 1794 aa22.6■■□□□ 1.21
CDRT15-201ENST00000420162 MADDQ8WXG6 1647 aa22.6■■□□□ 1.21
CDRT15-201ENST00000420162 MROH1Q8NDA8 1641 aa22.59■■□□□ 1.21
CDRT15-201ENST00000420162 KDM5DQ9BY66 1539 aa22.57■■□□□ 1.2
CDRT15-201ENST00000420162 UNC13BO14795 1591 aa22.57■■□□□ 1.2
CDRT15-201ENST00000420162 HRCP23327 699 aa22.56■■□□□ 1.2
CDRT15-201ENST00000420162 NUP155O75694 1391 aa22.55■■□□□ 1.2
CDRT15-201ENST00000420162 ABCC3O15438 1527 aa22.54■■□□□ 1.2
CDRT15-201ENST00000420162 ZC3H13Q5T200 1668 aaKnown RBP22.54■■□□□ 1.2
CDRT15-201ENST00000420162 RIMS1Q86UR5 1692 aaKnown RBP22.54■■□□□ 1.2
CDRT15-201ENST00000420162 VWDEQ8N2E2 1590 aa22.54■■□□□ 1.2
CDRT15-201ENST00000420162 ZMYM3Q14202 1370 aa22.53■■□□□ 1.2
CDRT15-201ENST00000420162 RAB3GAP2Q9H2M9 1393 aa22.53■■□□□ 1.2
CDRT15-201ENST00000420162 CLTCQ00610 1675 aaKnown RBP22.53■■□□□ 1.2
CDRT15-201ENST00000420162 TRIM52Q96A61 297 aa22.53■■□□□ 1.2
CDRT15-201ENST00000420162 MROH2AA6NES4 1674 aa22.52■■□□□ 1.2
CDRT15-201ENST00000420162 PTPRMP28827 1452 aa22.52■■□□□ 1.2
CDRT15-201ENST00000420162 LMTK2Q8IWU2 1503 aa22.51■■□□□ 1.19
CDRT15-201ENST00000420162 IQGAP3Q86VI3 1631 aa22.48■■□□□ 1.19
CDRT15-201ENST00000420162 CEP152O94986 1710 aa22.48■■□□□ 1.19
CDRT15-201ENST00000420162 ARHGAP31Q2M1Z3 1444 aa22.47■■□□□ 1.19
CDRT15-201ENST00000420162 CEBPAP49715 358 aaPredicted RBP22.46■■□□□ 1.19
CDRT15-201ENST00000420162 PCGF6Q9BYE7 350 aa22.46■■□□□ 1.19
CDRT15-201ENST00000420162 CAMSAP1Q5T5Y3 1602 aa22.45■■□□□ 1.18
CDRT15-201ENST00000420162 TET3O43151 1660 aa22.44■■□□□ 1.18
CDRT15-201ENST00000420162 C3P01024 1663 aa22.44■■□□□ 1.18
CDRT15-201ENST00000420162 PZPP20742 1482 aa22.44■■□□□ 1.18
CDRT15-201ENST00000420162 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
CDRT15-201ENST00000420162 SLC4A1APQ9BWU0 796 aaKnown RBP22.43■■□□□ 1.18
CDRT15-201ENST00000420162 EFCAB6Q5THR3 1501 aa22.41■■□□□ 1.18
CDRT15-201ENST00000420162 NPATQ14207 1427 aa22.41■■□□□ 1.18
CDRT15-201ENST00000420162 SETD1BQ9UPS6 1966 aaKnown RBP22.41■■□□□ 1.18
CDRT15-201ENST00000420162 RPRD2Q5VT52 1461 aaKnown RBP22.41■■□□□ 1.18
CDRT15-201ENST00000420162 MPHOSPH9Q99550 1183 aa22.4■■□□□ 1.18
CDRT15-201ENST00000420162 FBXO31Q5XUX0 539 aaPredicted RBP22.39■■□□□ 1.17
CDRT15-201ENST00000420162 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
CDRT15-201ENST00000420162 CFAP65Q6ZU64 1925 aaKnown RBP22.37■■□□□ 1.17
CDRT15-201ENST00000420162 PKD2Q13563 968 aa22.36■■□□□ 1.17
CDRT15-201ENST00000420162 E9PCH4 1651 aa22.34■■□□□ 1.17
CDRT15-201ENST00000420162 ERVK-7P63135 1459 aa22.34■■□□□ 1.17
CDRT15-201ENST00000420162 TNRQ92752 1358 aa22.33■■□□□ 1.17
CDRT15-201ENST00000420162 SPATA31D1Q6ZQQ2 1576 aa22.33■■□□□ 1.16
CDRT15-201ENST00000420162 PREX1Q8TCU6 1659 aa22.32■■□□□ 1.16
CDRT15-201ENST00000420162 NOS1P29475 1434 aa22.31■■□□□ 1.16
CDRT15-201ENST00000420162 SLC52A1Q9NWF4 448 aa22.28■■□□□ 1.16
CDRT15-201ENST00000420162 PTPRTO14522 1441 aa22.27■■□□□ 1.16
CDRT15-201ENST00000420162 NLRP1Q9C000 1473 aa22.26■■□□□ 1.15
CDRT15-201ENST00000420162 UHRF1BP1Q6BDS2 1440 aa22.25■■□□□ 1.15
CDRT15-201ENST00000420162 FOXD1Q16676 465 aa22.25■■□□□ 1.15
CDRT15-201ENST00000420162 SYNMO15061 1565 aa22.23■■□□□ 1.15
CDRT15-201ENST00000420162 SPHKAPQ2M3C7 1700 aa22.23■■□□□ 1.15
CDRT15-201ENST00000420162 IDI1Q13907 227 aa22.22■■□□□ 1.15
CDRT15-201ENST00000420162 A2ML1A8K2U0 1454 aa22.21■■□□□ 1.15
CDRT15-201ENST00000420162 PLA2R1Q13018 1463 aa22.21■■□□□ 1.15
CDRT15-201ENST00000420162 MYO3AQ8NEV4 1616 aa22.2■■□□□ 1.15
CDRT15-201ENST00000420162 TRPM2O94759 1503 aa22.2■■□□□ 1.14
CDRT15-201ENST00000420162 CEP170BQ9Y4F5 1589 aaPredicted RBP22.17■■□□□ 1.14
CDRT15-201ENST00000420162 THEMISQ8N1K5 641 aaPredicted RBP22.17■■□□□ 1.14
CDRT15-201ENST00000420162 STAG3Q9UJ98 1225 aa22.17■■□□□ 1.14
CDRT15-201ENST00000420162 PIK3C2BO00750 1634 aa22.17■■□□□ 1.14
CDRT15-201ENST00000420162 LMTK3Q96Q04 1460 aa22.16■■□□□ 1.14
CDRT15-201ENST00000420162 DHX57Q6P158 1386 aaKnown RBP22.16■■□□□ 1.14
CDRT15-201ENST00000420162 ANKRD30BQ9BXX2 1392 aa22.16■■□□□ 1.14
CDRT15-201ENST00000420162 ZNF142P52746 1687 aaPredicted RBP22.16■■□□□ 1.14
CDRT15-201ENST00000420162 CCDC144AA2RUR9 1427 aa22.14■■□□□ 1.14
CDRT15-201ENST00000420162 UGGT1Q9NYU2 1555 aa22.14■■□□□ 1.13
CDRT15-201ENST00000420162 KDM5AP29375 1690 aaKnown RBP22.12■■□□□ 1.13
CDRT15-201ENST00000420162 CLTCL1P53675 1640 aa22.11■■□□□ 1.13
CDRT15-201ENST00000420162 CHGAP10645 457 aaKnown RBP22.11■■□□□ 1.13
CDRT15-201ENST00000420162 UBR1Q8IWV7 1749 aa22.09■■□□□ 1.13
CDRT15-201ENST00000420162 ADGRB3O60242 1522 aa22.09■■□□□ 1.13
CDRT15-201ENST00000420162 HSPA2P54652 639 aa22.08■■□□□ 1.13
CDRT15-201ENST00000420162 TMEM131LA2VDJ0 1609 aa22.07■■□□□ 1.12
CDRT15-201ENST00000420162 KIF1BO60333 1816 aa22.07■■□□□ 1.12
CDRT15-201ENST00000420162 HDGFP51858 240 aaKnown RBP22.05■■□□□ 1.12
CDRT15-201ENST00000420162 TMEM2Q9UHN6 1383 aa22.04■■□□□ 1.12
CDRT15-201ENST00000420162 ZNF326Q5BKZ1 582 aaKnown RBP22.03■■□□□ 1.12
CDRT15-201ENST00000420162 ANKLE2Q86XL3 938 aa22.03■■□□□ 1.12
CDRT15-201ENST00000420162 EID1Q9Y6B2 187 aa22.02■■□□□ 1.12
CDRT15-201ENST00000420162 MYO5BQ9ULV0 1848 aa22.01■■□□□ 1.11
CDRT15-201ENST00000420162 SLIT1O75093 1534 aa22.01■■□□□ 1.11
CDRT15-201ENST00000420162 NEURL4Q96JN8 1562 aa22.01■■□□□ 1.11
CDRT15-201ENST00000420162 ARHGAP23Q9P227 1491 aa22.01■■□□□ 1.11
CDRT15-201ENST00000420162 RPGRIP1LQ68CZ1 1315 aa22.01■■□□□ 1.11
CDRT15-201ENST00000420162 SPATA31E1Q6ZUB1 1445 aa22■■□□□ 1.11
CDRT15-201ENST00000420162 ABCF1Q8NE71 845 aaKnown RBP eCLIP22■■□□□ 1.11
CDRT15-201ENST00000420162 CLSPNQ9HAW4 1339 aa22■■□□□ 1.11
CDRT15-201ENST00000420162 TXNDC2Q86VQ3 553 aa21.99■■□□□ 1.11
CDRT15-201ENST00000420162 RGL3Q3MIN7 710 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms