RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 NEURL4Q96JN8 1562 aa22.16■■□□□ 1.14
NOD1-205ENST00000419799 POLR1AO95602 1720 aaPredicted RBP22.16■■□□□ 1.14
NOD1-205ENST00000419799 MED1Q15648 1581 aaPredicted RBP22.16■■□□□ 1.14
NOD1-205ENST00000419799 SHANK2Q9UPX8 1470 aa22.15■■□□□ 1.14
NOD1-205ENST00000419799 TNRQ92752 1358 aa22.15■■□□□ 1.14
NOD1-205ENST00000419799 ZNF644Q9H582 1327 aaPredicted RBP22.15■■□□□ 1.14
NOD1-205ENST00000419799 LOC105371045A0A1W2PR82 267 aa22.15■■□□□ 1.14
NOD1-205ENST00000419799 FAM135AQ9P2D6 1515 aa22.15■■□□□ 1.14
NOD1-205ENST00000419799 TIAM1Q13009 1591 aa22.14■■□□□ 1.13
NOD1-205ENST00000419799 SCAF1Q9H7N4 1312 aaKnown RBP22.13■■□□□ 1.13
NOD1-205ENST00000419799 PIP4K2BP78356 416 aa22.13■■□□□ 1.13
NOD1-205ENST00000419799 PZPP20742 1482 aa22.13■■□□□ 1.13
NOD1-205ENST00000419799 KDM5DQ9BY66 1539 aa22.11■■□□□ 1.13
NOD1-205ENST00000419799 FBXO31Q5XUX0 539 aaPredicted RBP22.11■■□□□ 1.13
NOD1-205ENST00000419799 ANKLE2Q86XL3 938 aa22.1■■□□□ 1.13
NOD1-205ENST00000419799 KIF3BO15066 747 aa22.09■■□□□ 1.13
NOD1-205ENST00000419799 EHBP1L1Q8N3D4 1523 aa22.09■■□□□ 1.13
NOD1-205ENST00000419799 THEMISQ8N1K5 641 aaPredicted RBP22.08■■□□□ 1.13
NOD1-205ENST00000419799 VWDEQ8N2E2 1590 aa22.08■■□□□ 1.12
NOD1-205ENST00000419799 CEP162Q5TB80 1403 aa22.07■■□□□ 1.12
NOD1-205ENST00000419799 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.07■■□□□ 1.12
NOD1-205ENST00000419799 MED14O60244 1454 aa22.07■■□□□ 1.12
NOD1-205ENST00000419799 NLRP1Q9C000 1473 aa22.07■■□□□ 1.12
NOD1-205ENST00000419799 MIA2Q96PC5 1412 aa22.06■■□□□ 1.12
NOD1-205ENST00000419799 WASHC2CQ9Y4E1 1318 aa22.06■■□□□ 1.12
NOD1-205ENST00000419799 CCDC141Q6ZP82 1450 aa22.05■■□□□ 1.12
NOD1-205ENST00000419799 RSPH4AQ5TD94 716 aa22.05■■□□□ 1.12
NOD1-205ENST00000419799 DEPDC5O75140 1603 aa22.05■■□□□ 1.12
NOD1-205ENST00000419799 NPHP4O75161 1426 aaPredicted RBP22.04■■□□□ 1.12
NOD1-205ENST00000419799 UGGT1Q9NYU2 1555 aa22.04■■□□□ 1.12
NOD1-205ENST00000419799 ALKQ9UM73 1620 aa22.02■■□□□ 1.12
NOD1-205ENST00000419799 CAMSAP2Q08AD1 1489 aa21.98■■□□□ 1.11
NOD1-205ENST00000419799 IQGAP1P46940 1657 aa21.98■■□□□ 1.11
NOD1-205ENST00000419799 NCOA2Q15596 1464 aa21.95■■□□□ 1.1
NOD1-205ENST00000419799 LRRC7Q96NW7 1537 aa21.94■■□□□ 1.1
NOD1-205ENST00000419799 ARHGEF5Q12774 1597 aa21.94■■□□□ 1.1
NOD1-205ENST00000419799 SYNMO15061 1565 aa21.92■■□□□ 1.1
NOD1-205ENST00000419799 TSPY4P0CV99 314 aa21.92■■□□□ 1.1
NOD1-205ENST00000419799 TSPY10P0CW01 314 aa21.92■■□□□ 1.1
NOD1-205ENST00000419799 RNF17Q9BXT8 1623 aaKnown RBP21.91■■□□□ 1.1
NOD1-205ENST00000419799 STRCP1A6NGW2 1772 aa21.91■■□□□ 1.1
NOD1-205ENST00000419799 ZC3H13Q5T200 1668 aaKnown RBP21.9■■□□□ 1.1
NOD1-205ENST00000419799 ABCC3O15438 1527 aa21.9■■□□□ 1.1
NOD1-205ENST00000419799 ERVK-7P63135 1459 aa21.88■■□□□ 1.09
NOD1-205ENST00000419799 MAST1Q9Y2H9 1570 aa21.85■■□□□ 1.09
NOD1-205ENST00000419799 EIF2AK4Q9P2K8 1649 aaKnown RBP21.84■■□□□ 1.09
NOD1-205ENST00000419799 SCAF11Q99590 1463 aaKnown RBP21.83■■□□□ 1.08
NOD1-205ENST00000419799 UBR1Q8IWV7 1749 aa21.82■■□□□ 1.08
NOD1-205ENST00000419799 FOXD1Q16676 465 aa21.81■■□□□ 1.08
NOD1-205ENST00000419799 MROH1Q8NDA8 1641 aa21.8■■□□□ 1.08
NOD1-205ENST00000419799 ARHGAP23Q9P227 1491 aa21.8■■□□□ 1.08
NOD1-205ENST00000419799 RGS17Q9UGC6 210 aaPredicted RBP21.79■■□□□ 1.08
NOD1-205ENST00000419799 SLIT1O75093 1534 aa21.79■■□□□ 1.08
NOD1-205ENST00000419799 LTKP29376 864 aa21.77■■□□□ 1.08
NOD1-205ENST00000419799 TXNDC2Q86VQ3 553 aa21.76■■□□□ 1.07
NOD1-205ENST00000419799 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
NOD1-205ENST00000419799 CEP152O94986 1710 aa21.75■■□□□ 1.07
NOD1-205ENST00000419799 ARHGAP31Q2M1Z3 1444 aa21.75■■□□□ 1.07
NOD1-205ENST00000419799 LRRC9Q6ZRR7 1453 aa21.74■■□□□ 1.07
NOD1-205ENST00000419799 FAM135BQ49AJ0 1406 aa21.73■■□□□ 1.07
NOD1-205ENST00000419799 DUOX2Q9NRD8 1548 aa21.73■■□□□ 1.07
NOD1-205ENST00000419799 XIRP1Q702N8 1843 aaKnown RBP21.73■■□□□ 1.07
NOD1-205ENST00000419799 EID1Q9Y6B2 187 aa21.72■■□□□ 1.07
NOD1-205ENST00000419799 PRDM15P57071 1507 aaPredicted RBP21.7■■□□□ 1.06
NOD1-205ENST00000419799 CFAP65Q6ZU64 1925 aaKnown RBP21.68■■□□□ 1.06
NOD1-205ENST00000419799 TMEM2Q9UHN6 1383 aa21.68■■□□□ 1.06
NOD1-205ENST00000419799 MYOM3Q5VTT5 1437 aa21.68■■□□□ 1.06
NOD1-205ENST00000419799 ERBINQ96RT1 1412 aa21.65■■□□□ 1.06
NOD1-205ENST00000419799 PIK3C2BO00750 1634 aa21.65■■□□□ 1.06
NOD1-205ENST00000419799 TMEM94Q12767 1356 aa21.64■■□□□ 1.06
NOD1-205ENST00000419799 KIF15Q9NS87 1388 aa21.63■■□□□ 1.05
NOD1-205ENST00000419799 KDM5AP29375 1690 aaKnown RBP21.63■■□□□ 1.05
NOD1-205ENST00000419799 POTEAQ6S8J7 498 aa21.63■■□□□ 1.05
NOD1-205ENST00000419799 MAP3K1Q13233 1512 aa21.63■■□□□ 1.05
NOD1-205ENST00000419799 KCNA6P17658 529 aa21.62■■□□□ 1.05
NOD1-205ENST00000419799 KANK4Q5T7N3 995 aaPredicted RBP21.62■■□□□ 1.05
NOD1-205ENST00000419799 STAG3Q9UJ98 1225 aa21.61■■□□□ 1.05
NOD1-205ENST00000419799 EFCAB6Q5THR3 1501 aa21.6■■□□□ 1.05
NOD1-205ENST00000419799 TET3O43151 1660 aa21.6■■□□□ 1.05
NOD1-205ENST00000419799 APLP2Q06481 763 aa21.59■■□□□ 1.05
NOD1-205ENST00000419799 ROBO1Q9Y6N7 1651 aa21.59■■□□□ 1.05
NOD1-205ENST00000419799 RRP7BPQ9NSQ0 103 aa21.58■■□□□ 1.05
NOD1-205ENST00000419799 KANK1Q14678 1352 aa21.58■■□□□ 1.04
NOD1-205ENST00000419799 ABCC5O15440 1437 aa21.57■■□□□ 1.04
NOD1-205ENST00000419799 LMTK2Q8IWU2 1503 aa21.57■■□□□ 1.04
NOD1-205ENST00000419799 IDI1Q13907 227 aa21.57■■□□□ 1.04
NOD1-205ENST00000419799 PROSER2Q86WR7 435 aaPredicted RBP21.57■■□□□ 1.04
NOD1-205ENST00000419799 CROCC2H7BZ55 1655 aa21.56■■□□□ 1.04
NOD1-205ENST00000419799 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.56■■□□□ 1.04
NOD1-205ENST00000419799 NKTRP30414 1462 aaKnown RBP21.56■■□□□ 1.04
NOD1-205ENST00000419799 NWD1Q149M9 1564 aa21.54■■□□□ 1.04
NOD1-205ENST00000419799 SLC26A8Q96RN1 970 aa21.54■■□□□ 1.04
NOD1-205ENST00000419799 NOS1P29475 1434 aa21.52■■□□□ 1.04
NOD1-205ENST00000419799 MSH6P52701 1360 aa21.51■■□□□ 1.03
NOD1-205ENST00000419799 RBM33Q96EV2 1170 aaKnown RBP21.51■■□□□ 1.03
NOD1-205ENST00000419799 DAPK1P53355 1430 aa21.5■■□□□ 1.03
NOD1-205ENST00000419799 ADGRB3O60242 1522 aa21.5■■□□□ 1.03
NOD1-205ENST00000419799 PTPN23Q9H3S7 1636 aa21.49■■□□□ 1.03
NOD1-205ENST00000419799 JCADQ9P266 1359 aa21.48■■□□□ 1.03
NOD1-205ENST00000419799 SLC52A1Q9NWF4 448 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms