RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 UBTFP17480 764 aaKnown RBP17.48■□□□□ 0.39
RAPGEF1-205ENST00000419442 FAM135AQ9P2D6 1515 aa17.47■□□□□ 0.39
RAPGEF1-205ENST00000419442 RNF17Q9BXT8 1623 aaKnown RBP17.47■□□□□ 0.39
RAPGEF1-205ENST00000419442 ZNF777Q9ULD5 760 aaPredicted RBP17.47■□□□□ 0.39
RAPGEF1-205ENST00000419442 TNRQ92752 1358 aa17.47■□□□□ 0.39
RAPGEF1-205ENST00000419442 SYNMO15061 1565 aa17.47■□□□□ 0.39
RAPGEF1-205ENST00000419442 PZPP20742 1482 aa17.46■□□□□ 0.39
RAPGEF1-205ENST00000419442 RGS17Q9UGC6 210 aaPredicted RBP17.45■□□□□ 0.38
RAPGEF1-205ENST00000419442 IQGAP1P46940 1657 aa17.45■□□□□ 0.38
RAPGEF1-205ENST00000419442 LRRC7Q96NW7 1537 aa17.44■□□□□ 0.38
RAPGEF1-205ENST00000419442 NPHP4O75161 1426 aaPredicted RBP17.44■□□□□ 0.38
RAPGEF1-205ENST00000419442 ANKLE2Q86XL3 938 aa17.43■□□□□ 0.38
RAPGEF1-205ENST00000419442 FYCO1Q9BQS8 1478 aa17.43■□□□□ 0.38
RAPGEF1-205ENST00000419442 NLRP1Q9C000 1473 aa17.42■□□□□ 0.38
RAPGEF1-205ENST00000419442 KDM5DQ9BY66 1539 aa17.42■□□□□ 0.38
RAPGEF1-205ENST00000419442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.41■□□□□ 0.38
RAPGEF1-205ENST00000419442 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
RAPGEF1-205ENST00000419442 RTEL1-TNFRSF6BF6WH68 1400 aa17.4■□□□□ 0.38
RAPGEF1-205ENST00000419442 FBXO31Q5XUX0 539 aaPredicted RBP17.4■□□□□ 0.38
RAPGEF1-205ENST00000419442 THEMISQ8N1K5 641 aaPredicted RBP17.39■□□□□ 0.37
RAPGEF1-205ENST00000419442 DHX29Q7Z478 1369 aaKnown RBP17.39■□□□□ 0.37
RAPGEF1-205ENST00000419442 MBD5Q9P267 1494 aa17.38■□□□□ 0.37
RAPGEF1-205ENST00000419442 CFDP1Q9UEE9 299 aaPredicted RBP17.38■□□□□ 0.37
RAPGEF1-205ENST00000419442 ZC3H13Q5T200 1668 aaKnown RBP17.38■□□□□ 0.37
RAPGEF1-205ENST00000419442 MIA2Q96PC5 1412 aa17.38■□□□□ 0.37
RAPGEF1-205ENST00000419442 XIRP1Q702N8 1843 aaKnown RBP17.36■□□□□ 0.37
RAPGEF1-205ENST00000419442 EHMT2Q96KQ7 1210 aa17.35■□□□□ 0.37
RAPGEF1-205ENST00000419442 CCNB3Q8WWL7 1395 aa17.35■□□□□ 0.37
RAPGEF1-205ENST00000419442 TIAM1Q13009 1591 aa17.32■□□□□ 0.36
RAPGEF1-205ENST00000419442 KIF3BO15066 747 aa17.3■□□□□ 0.36
RAPGEF1-205ENST00000419442 POTEAQ6S8J7 498 aa17.3■□□□□ 0.36
RAPGEF1-205ENST00000419442 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
RAPGEF1-205ENST00000419442 ZNF644Q9H582 1327 aaPredicted RBP17.29■□□□□ 0.36
RAPGEF1-205ENST00000419442 WASHC2CQ9Y4E1 1318 aa17.28■□□□□ 0.36
RAPGEF1-205ENST00000419442 UBR1Q8IWV7 1749 aa17.27■□□□□ 0.36
RAPGEF1-205ENST00000419442 FAM135BQ49AJ0 1406 aa17.27■□□□□ 0.35
RAPGEF1-205ENST00000419442 SETD1AO15047 1707 aaKnown RBP17.27■□□□□ 0.35
RAPGEF1-205ENST00000419442 CCDC141Q6ZP82 1450 aa17.24■□□□□ 0.35
RAPGEF1-205ENST00000419442 SCAF11Q99590 1463 aaKnown RBP17.24■□□□□ 0.35
RAPGEF1-205ENST00000419442 ABCC3O15438 1527 aa17.23■□□□□ 0.35
RAPGEF1-205ENST00000419442 MTUS2Q5JR59 1369 aa17.23■□□□□ 0.35
RAPGEF1-205ENST00000419442 ERVK-7P63135 1459 aa17.23■□□□□ 0.35
RAPGEF1-205ENST00000419442 ARHGAP23Q9P227 1491 aa17.23■□□□□ 0.35
RAPGEF1-205ENST00000419442 SLIT1O75093 1534 aa17.21■□□□□ 0.35
RAPGEF1-205ENST00000419442 EHBP1L1Q8N3D4 1523 aa17.21■□□□□ 0.35
RAPGEF1-205ENST00000419442 NCOA2Q15596 1464 aa17.21■□□□□ 0.35
RAPGEF1-205ENST00000419442 ROBO1Q9Y6N7 1651 aa17.2■□□□□ 0.34
RAPGEF1-205ENST00000419442 CEP162Q5TB80 1403 aa17.2■□□□□ 0.34
RAPGEF1-205ENST00000419442 ARHGEF5Q12774 1597 aa17.19■□□□□ 0.34
RAPGEF1-205ENST00000419442 RSPH4AQ5TD94 716 aa17.18■□□□□ 0.34
RAPGEF1-205ENST00000419442 CAMSAP2Q08AD1 1489 aa17.18■□□□□ 0.34
RAPGEF1-205ENST00000419442 MROH1Q8NDA8 1641 aa17.18■□□□□ 0.34
RAPGEF1-205ENST00000419442 EIF2AK4Q9P2K8 1649 aaKnown RBP17.18■□□□□ 0.34
RAPGEF1-205ENST00000419442 MAP3K1Q13233 1512 aa17.16■□□□□ 0.34
RAPGEF1-205ENST00000419442 CFAP65Q6ZU64 1925 aaKnown RBP17.15■□□□□ 0.34
RAPGEF1-205ENST00000419442 LTKP29376 864 aa17.15■□□□□ 0.34
RAPGEF1-205ENST00000419442 CEP152O94986 1710 aa17.15■□□□□ 0.34
RAPGEF1-205ENST00000419442 LRRC9Q6ZRR7 1453 aa17.14■□□□□ 0.33
RAPGEF1-205ENST00000419442 MAST1Q9Y2H9 1570 aa17.13■□□□□ 0.33
RAPGEF1-205ENST00000419442 TMEM94Q12767 1356 aa17.12■□□□□ 0.33
RAPGEF1-205ENST00000419442 TXNDC2Q86VQ3 553 aa17.11■□□□□ 0.33
RAPGEF1-205ENST00000419442 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
RAPGEF1-205ENST00000419442 PHLPP1O60346 1717 aa17.1■□□□□ 0.33
RAPGEF1-205ENST00000419442 UPF1Q92900 1129 aaKnown RBP eCLIP17.09■□□□□ 0.33
RAPGEF1-205ENST00000419442 PIK3C2BO00750 1634 aa17.08■□□□□ 0.32
RAPGEF1-205ENST00000419442 NWD1Q149M9 1564 aa17.08■□□□□ 0.32
RAPGEF1-205ENST00000419442 ARHGAP31Q2M1Z3 1444 aa17.08■□□□□ 0.32
RAPGEF1-205ENST00000419442 TET3O43151 1660 aa17.07■□□□□ 0.32
RAPGEF1-205ENST00000419442 PRDM15P57071 1507 aaPredicted RBP17.07■□□□□ 0.32
RAPGEF1-205ENST00000419442 JCADQ9P266 1359 aa17.07■□□□□ 0.32
RAPGEF1-205ENST00000419442 COL16A1Q07092 1604 aaPredicted RBP17.07■□□□□ 0.32
RAPGEF1-205ENST00000419442 TMEM2Q9UHN6 1383 aa17.06■□□□□ 0.32
RAPGEF1-205ENST00000419442 KCNA6P17658 529 aa17.06■□□□□ 0.32
RAPGEF1-205ENST00000419442 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
RAPGEF1-205ENST00000419442 TSPY4P0CV99 314 aa17.05■□□□□ 0.32
RAPGEF1-205ENST00000419442 TSPY10P0CW01 314 aa17.05■□□□□ 0.32
RAPGEF1-205ENST00000419442 EID1Q9Y6B2 187 aa17.05■□□□□ 0.32
RAPGEF1-205ENST00000419442 LRP6O75581 1613 aa17.03■□□□□ 0.32
RAPGEF1-205ENST00000419442 EFCAB6Q5THR3 1501 aa17.01■□□□□ 0.31
RAPGEF1-205ENST00000419442 FGD6Q6ZV73 1430 aa17■□□□□ 0.31
RAPGEF1-205ENST00000419442 PROSER2Q86WR7 435 aaPredicted RBP17■□□□□ 0.31
RAPGEF1-205ENST00000419442 SHPRHQ149N8 1683 aa17■□□□□ 0.31
RAPGEF1-205ENST00000419442 DUOX2Q9NRD8 1548 aa17■□□□□ 0.31
RAPGEF1-205ENST00000419442 MSH6P52701 1360 aa16.99■□□□□ 0.31
RAPGEF1-205ENST00000419442 CDK12Q9NYV4 1490 aaPredicted RBP16.99■□□□□ 0.31
RAPGEF1-205ENST00000419442 SPATA31A6Q5VVP1 1343 aa16.98■□□□□ 0.31
RAPGEF1-205ENST00000419442 ZNF772Q68DY9 489 aaPredicted RBP16.98■□□□□ 0.31
RAPGEF1-205ENST00000419442 SLAIN2Q9P270 581 aa16.98■□□□□ 0.31
RAPGEF1-205ENST00000419442 CHD2O14647 1828 aaKnown RBP16.97■□□□□ 0.31
RAPGEF1-205ENST00000419442 RBM33Q96EV2 1170 aaKnown RBP16.96■□□□□ 0.31
RAPGEF1-205ENST00000419442 AHDC1Q5TGY3 1603 aaPredicted RBP16.96■□□□□ 0.3
RAPGEF1-205ENST00000419442 SLC26A8Q96RN1 970 aa16.95■□□□□ 0.3
RAPGEF1-205ENST00000419442 TRIM52Q96A61 297 aa16.94■□□□□ 0.3
RAPGEF1-205ENST00000419442 ADGRB3O60242 1522 aa16.92■□□□□ 0.3
RAPGEF1-205ENST00000419442 ERBINQ96RT1 1412 aa16.92■□□□□ 0.3
RAPGEF1-205ENST00000419442 LMTK2Q8IWU2 1503 aa16.91■□□□□ 0.3
RAPGEF1-205ENST00000419442 NCOA3Q9Y6Q9 1424 aa16.91■□□□□ 0.3
RAPGEF1-205ENST00000419442 IDI1Q13907 227 aa16.91■□□□□ 0.3
RAPGEF1-205ENST00000419442 DIP2AQ14689 1571 aa16.9■□□□□ 0.3
RAPGEF1-205ENST00000419442 CROCC2H7BZ55 1655 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms