RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 FBXO31Q5XUX0 539 aaPredicted RBP12.65□□□□□ -0.38
HLA-DPA1-241ENST00000417724 TNRQ92752 1358 aa12.65□□□□□ -0.38
HLA-DPA1-241ENST00000417724 WASHC2CQ9Y4E1 1318 aa12.64□□□□□ -0.39
HLA-DPA1-241ENST00000417724 PIP4K2BP78356 416 aa12.64□□□□□ -0.39
HLA-DPA1-241ENST00000417724 ANKLE2Q86XL3 938 aa12.64□□□□□ -0.39
HLA-DPA1-241ENST00000417724 THEMISQ8N1K5 641 aaPredicted RBP12.64□□□□□ -0.39
HLA-DPA1-241ENST00000417724 TIAM1Q13009 1591 aa12.64□□□□□ -0.39
HLA-DPA1-241ENST00000417724 CPS1P31327 1500 aa12.62□□□□□ -0.39
HLA-DPA1-241ENST00000417724 EHBP1L1Q8N3D4 1523 aa12.62□□□□□ -0.39
HLA-DPA1-241ENST00000417724 POLR1AO95602 1720 aaPredicted RBP12.62□□□□□ -0.39
HLA-DPA1-241ENST00000417724 SHANK2Q9UPX8 1470 aa12.62□□□□□ -0.39
HLA-DPA1-241ENST00000417724 HSPA1LP34931 641 aa12.62□□□□□ -0.39
HLA-DPA1-241ENST00000417724 CEP162Q5TB80 1403 aa12.62□□□□□ -0.39
HLA-DPA1-241ENST00000417724 PZPP20742 1482 aa12.61□□□□□ -0.39
HLA-DPA1-241ENST00000417724 FAM135AQ9P2D6 1515 aa12.61□□□□□ -0.39
HLA-DPA1-241ENST00000417724 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.6□□□□□ -0.39
HLA-DPA1-241ENST00000417724 TSPY4P0CV99 314 aa12.6□□□□□ -0.39
HLA-DPA1-241ENST00000417724 TSPY10P0CW01 314 aa12.6□□□□□ -0.39
HLA-DPA1-241ENST00000417724 KDM5DQ9BY66 1539 aa12.6□□□□□ -0.39
HLA-DPA1-241ENST00000417724 MIA2Q96PC5 1412 aa12.6□□□□□ -0.39
HLA-DPA1-241ENST00000417724 CCDC141Q6ZP82 1450 aa12.59□□□□□ -0.39
HLA-DPA1-241ENST00000417724 NEURL4Q96JN8 1562 aa12.59□□□□□ -0.39
HLA-DPA1-241ENST00000417724 NLRP1Q9C000 1473 aa12.59□□□□□ -0.39
HLA-DPA1-241ENST00000417724 UGGT1Q9NYU2 1555 aa12.56□□□□□ -0.4
HLA-DPA1-241ENST00000417724 NPHP4O75161 1426 aaPredicted RBP12.56□□□□□ -0.4
HLA-DPA1-241ENST00000417724 MED14O60244 1454 aa12.56□□□□□ -0.4
HLA-DPA1-241ENST00000417724 CAMSAP2Q08AD1 1489 aa12.56□□□□□ -0.4
HLA-DPA1-241ENST00000417724 NCOA2Q15596 1464 aa12.56□□□□□ -0.4
HLA-DPA1-241ENST00000417724 MED1Q15648 1581 aaPredicted RBP12.55□□□□□ -0.4
HLA-DPA1-241ENST00000417724 DEPDC5O75140 1603 aa12.55□□□□□ -0.4
HLA-DPA1-241ENST00000417724 PHF23Q9BUL5 403 aaPredicted RBP12.54□□□□□ -0.4
HLA-DPA1-241ENST00000417724 VWDEQ8N2E2 1590 aa12.54□□□□□ -0.4
HLA-DPA1-241ENST00000417724 ARHGEF5Q12774 1597 aa12.53□□□□□ -0.4
HLA-DPA1-241ENST00000417724 IQGAP1P46940 1657 aa12.51□□□□□ -0.41
HLA-DPA1-241ENST00000417724 CFAP65Q6ZU64 1925 aaKnown RBP12.5□□□□□ -0.41
HLA-DPA1-241ENST00000417724 RNF17Q9BXT8 1623 aaKnown RBP12.49□□□□□ -0.41
HLA-DPA1-241ENST00000417724 ZC3H13Q5T200 1668 aaKnown RBP12.48□□□□□ -0.41
HLA-DPA1-241ENST00000417724 ABCC3O15438 1527 aa12.48□□□□□ -0.41
HLA-DPA1-241ENST00000417724 LRRC7Q96NW7 1537 aa12.48□□□□□ -0.41
HLA-DPA1-241ENST00000417724 ALKQ9UM73 1620 aa12.48□□□□□ -0.41
HLA-DPA1-241ENST00000417724 SENP3Q9H4L4 574 aaPredicted RBP12.47□□□□□ -0.41
HLA-DPA1-241ENST00000417724 STRCP1A6NGW2 1772 aa12.47□□□□□ -0.41
HLA-DPA1-241ENST00000417724 MAST1Q9Y2H9 1570 aa12.47□□□□□ -0.41
HLA-DPA1-241ENST00000417724 ERVK-7P63135 1459 aa12.46□□□□□ -0.41
HLA-DPA1-241ENST00000417724 TXNDC2Q86VQ3 553 aa12.46□□□□□ -0.41
HLA-DPA1-241ENST00000417724 EIF2AK4Q9P2K8 1649 aaKnown RBP12.46□□□□□ -0.41
HLA-DPA1-241ENST00000417724 SYNMO15061 1565 aa12.45□□□□□ -0.42
HLA-DPA1-241ENST00000417724 EID1Q9Y6B2 187 aa12.45□□□□□ -0.42
HLA-DPA1-241ENST00000417724 LRRC9Q6ZRR7 1453 aa12.45□□□□□ -0.42
HLA-DPA1-241ENST00000417724 LTKP29376 864 aa12.44□□□□□ -0.42
HLA-DPA1-241ENST00000417724 UBR1Q8IWV7 1749 aa12.44□□□□□ -0.42
HLA-DPA1-241ENST00000417724 SCAF11Q99590 1463 aaKnown RBP12.44□□□□□ -0.42
HLA-DPA1-241ENST00000417724 MYOM3Q5VTT5 1437 aa12.43□□□□□ -0.42
HLA-DPA1-241ENST00000417724 CEP152O94986 1710 aa12.42□□□□□ -0.42
HLA-DPA1-241ENST00000417724 DUOX2Q9NRD8 1548 aa12.42□□□□□ -0.42
HLA-DPA1-241ENST00000417724 MROH1Q8NDA8 1641 aa12.41□□□□□ -0.42
HLA-DPA1-241ENST00000417724 ARHGAP31Q2M1Z3 1444 aa12.41□□□□□ -0.42
HLA-DPA1-241ENST00000417724 KANK4Q5T7N3 995 aaPredicted RBP12.41□□□□□ -0.42
HLA-DPA1-241ENST00000417724 VPS8Q8N3P4 1428 aa12.41□□□□□ -0.42
HLA-DPA1-241ENST00000417724 STAG3Q9UJ98 1225 aa12.41□□□□□ -0.42
HLA-DPA1-241ENST00000417724 SLIT1O75093 1534 aa12.41□□□□□ -0.42
HLA-DPA1-241ENST00000417724 ARHGAP23Q9P227 1491 aa12.4□□□□□ -0.42
HLA-DPA1-241ENST00000417724 MAP3K1Q13233 1512 aa12.39□□□□□ -0.43
HLA-DPA1-241ENST00000417724 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.39□□□□□ -0.43
HLA-DPA1-241ENST00000417724 RRP7BPQ9NSQ0 103 aa12.39□□□□□ -0.43
HLA-DPA1-241ENST00000417724 KIF15Q9NS87 1388 aa12.39□□□□□ -0.43
HLA-DPA1-241ENST00000417724 RGS17Q9UGC6 210 aaPredicted RBP12.38□□□□□ -0.43
HLA-DPA1-241ENST00000417724 XIRP1Q702N8 1843 aaKnown RBP12.38□□□□□ -0.43
HLA-DPA1-241ENST00000417724 KANK1Q14678 1352 aa12.38□□□□□ -0.43
HLA-DPA1-241ENST00000417724 TMEM2Q9UHN6 1383 aa12.38□□□□□ -0.43
HLA-DPA1-241ENST00000417724 FAM135BQ49AJ0 1406 aa12.37□□□□□ -0.43
HLA-DPA1-241ENST00000417724 PRDM15P57071 1507 aaPredicted RBP12.37□□□□□ -0.43
HLA-DPA1-241ENST00000417724 ERBINQ96RT1 1412 aa12.37□□□□□ -0.43
HLA-DPA1-241ENST00000417724 KCNA6P17658 529 aa12.36□□□□□ -0.43
HLA-DPA1-241ENST00000417724 PROSER2Q86WR7 435 aaPredicted RBP12.36□□□□□ -0.43
HLA-DPA1-241ENST00000417724 LOC105371045A0A1W2PR82 267 aa12.35□□□□□ -0.43
HLA-DPA1-241ENST00000417724 APLP2Q06481 763 aa12.35□□□□□ -0.43
HLA-DPA1-241ENST00000417724 IDI1Q13907 227 aa12.35□□□□□ -0.43
HLA-DPA1-241ENST00000417724 PIK3C2BO00750 1634 aa12.35□□□□□ -0.43
HLA-DPA1-241ENST00000417724 TMEM94Q12767 1356 aa12.34□□□□□ -0.43
HLA-DPA1-241ENST00000417724 SLC26A8Q96RN1 970 aa12.34□□□□□ -0.43
HLA-DPA1-241ENST00000417724 KDM5AP29375 1690 aaKnown RBP12.34□□□□□ -0.43
HLA-DPA1-241ENST00000417724 ABCC5O15440 1437 aa12.34□□□□□ -0.43
HLA-DPA1-241ENST00000417724 EFCAB6Q5THR3 1501 aa12.33□□□□□ -0.44
HLA-DPA1-241ENST00000417724 BCANQ96GW7 911 aa12.32□□□□□ -0.44
HLA-DPA1-241ENST00000417724 CROCC2H7BZ55 1655 aa12.32□□□□□ -0.44
HLA-DPA1-241ENST00000417724 ANKRD30AQ9BXX3 1397 aa12.31□□□□□ -0.44
HLA-DPA1-241ENST00000417724 PTPN23Q9H3S7 1636 aa12.31□□□□□ -0.44
HLA-DPA1-241ENST00000417724 POTEAQ6S8J7 498 aa12.31□□□□□ -0.44
HLA-DPA1-241ENST00000417724 SLC52A1Q9NWF4 448 aa12.31□□□□□ -0.44
HLA-DPA1-241ENST00000417724 DAPK1P53355 1430 aa12.3□□□□□ -0.44
HLA-DPA1-241ENST00000417724 TET3O43151 1660 aa12.3□□□□□ -0.44
HLA-DPA1-241ENST00000417724 RBM33Q96EV2 1170 aaKnown RBP12.3□□□□□ -0.44
HLA-DPA1-241ENST00000417724 CHIC2Q9UKJ5 165 aa12.3□□□□□ -0.44
HLA-DPA1-241ENST00000417724 ROBO1Q9Y6N7 1651 aa12.29□□□□□ -0.44
HLA-DPA1-241ENST00000417724 LMTK2Q8IWU2 1503 aa12.29□□□□□ -0.44
HLA-DPA1-241ENST00000417724 HDGFP51858 240 aaKnown RBP12.29□□□□□ -0.44
HLA-DPA1-241ENST00000417724 SLAIN2Q9P270 581 aa12.29□□□□□ -0.44
HLA-DPA1-241ENST00000417724 MSH6P52701 1360 aa12.29□□□□□ -0.44
HLA-DPA1-241ENST00000417724 NOS1P29475 1434 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms