RNA–Protein interactions for RNA: ENST00000417504.5

PTPA-211, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-211ENST00000417504 CAMSAP2Q08AD1 1489 aa12.38□□□□□ -0.43
PTPA-211ENST00000417504 CROCC2H7BZ55 1655 aa12.38□□□□□ -0.43
PTPA-211ENST00000417504 PPRC1Q5VV67 1664 aaKnown RBP12.38□□□□□ -0.43
PTPA-211ENST00000417504 MIA2Q96PC5 1412 aa12.37□□□□□ -0.43
PTPA-211ENST00000417504 RGL2O15211 777 aa12.37□□□□□ -0.43
PTPA-211ENST00000417504 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
PTPA-211ENST00000417504 SAMD9LQ8IVG5 1584 aa12.37□□□□□ -0.43
PTPA-211ENST00000417504 CD109Q6YHK3 1445 aa12.37□□□□□ -0.43
PTPA-211ENST00000417504 ILDR1Q86SU0 546 aaPredicted RBP12.36□□□□□ -0.43
PTPA-211ENST00000417504 PHF12Q96QT6 1004 aa12.36□□□□□ -0.43
PTPA-211ENST00000417504 RRBP1Q9P2E9 1410 aaKnown RBP12.36□□□□□ -0.43
PTPA-211ENST00000417504 PLCH2O75038 1416 aa12.35□□□□□ -0.43
PTPA-211ENST00000417504 FANCAO15360 1455 aa12.34□□□□□ -0.43
PTPA-211ENST00000417504 TCOF1Q13428 1488 aaKnown RBP12.34□□□□□ -0.43
PTPA-211ENST00000417504 TEX14Q8IWB6 1497 aa12.34□□□□□ -0.43
PTPA-211ENST00000417504 DNMT1P26358 1616 aaKnown RBP12.34□□□□□ -0.43
PTPA-211ENST00000417504 ABCC1P33527 1531 aa12.34□□□□□ -0.43
PTPA-211ENST00000417504 SYCP2Q9BX26 1530 aa12.34□□□□□ -0.43
PTPA-211ENST00000417504 KIF12Q96FN5 646 aa12.34□□□□□ -0.43
PTPA-211ENST00000417504 CFDP1Q9UEE9 299 aaPredicted RBP12.34□□□□□ -0.43
PTPA-211ENST00000417504 ADGBQ8N7X0 1667 aa12.34□□□□□ -0.43
PTPA-211ENST00000417504 PLEKHH2Q8IVE3 1493 aa12.34□□□□□ -0.43
PTPA-211ENST00000417504 FAM50AQ14320 339 aaKnown RBP12.32□□□□□ -0.44
PTPA-211ENST00000417504 RNF25Q96BH1 459 aaPredicted RBP12.32□□□□□ -0.44
PTPA-211ENST00000417504 ZNF777Q9ULD5 760 aaPredicted RBP12.32□□□□□ -0.44
PTPA-211ENST00000417504 ARHGEF5Q12774 1597 aa12.31□□□□□ -0.44
PTPA-211ENST00000417504 MAP3K13O43283 966 aa12.31□□□□□ -0.44
PTPA-211ENST00000417504 NEO1Q92859 1461 aa12.31□□□□□ -0.44
PTPA-211ENST00000417504 ADGRL1O94910 1474 aa12.3□□□□□ -0.44
PTPA-211ENST00000417504 RIOK3O14730 519 aaKnown RBP12.29□□□□□ -0.44
PTPA-211ENST00000417504 TRIM26Q12899 539 aaPredicted RBP12.29□□□□□ -0.44
PTPA-211ENST00000417504 EFCAB2Q5VUJ9 269 aa12.29□□□□□ -0.44
PTPA-211ENST00000417504 SGIP1Q9BQI5 828 aa12.29□□□□□ -0.44
PTPA-211ENST00000417504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.29□□□□□ -0.44
PTPA-211ENST00000417504 PCDHB13Q9Y5F0 798 aa12.28□□□□□ -0.44
PTPA-211ENST00000417504 RICTORQ6R327 1708 aa12.28□□□□□ -0.44
PTPA-211ENST00000417504 CCDC141Q6ZP82 1450 aa12.27□□□□□ -0.44
PTPA-211ENST00000417504 ZNF467Q7Z7K2 595 aaPredicted RBP12.27□□□□□ -0.45
PTPA-211ENST00000417504 AKNAQ7Z591 1439 aa12.27□□□□□ -0.45
PTPA-211ENST00000417504 DAPK1P53355 1430 aa12.26□□□□□ -0.45
PTPA-211ENST00000417504 SHANK2Q9UPX8 1470 aa12.26□□□□□ -0.45
PTPA-211ENST00000417504 GCC2Q8IWJ2 1684 aa12.26□□□□□ -0.45
PTPA-211ENST00000417504 PCDHB8Q9UN66 801 aa12.25□□□□□ -0.45
PTPA-211ENST00000417504 ZNF644Q9H582 1327 aaPredicted RBP12.25□□□□□ -0.45
PTPA-211ENST00000417504 KIAA1107Q9UPP5 1409 aa12.25□□□□□ -0.45
PTPA-211ENST00000417504 ITGAEP38570 1179 aa12.24□□□□□ -0.45
PTPA-211ENST00000417504 ZNF518AQ6AHZ1 1483 aa12.24□□□□□ -0.45
PTPA-211ENST00000417504 IFNL1Q8IU54 200 aa12.24□□□□□ -0.45
PTPA-211ENST00000417504 HECW2Q9P2P5 1572 aa12.24□□□□□ -0.45
PTPA-211ENST00000417504 MAST1Q9Y2H9 1570 aa12.24□□□□□ -0.45
PTPA-211ENST00000417504 INO80Q9ULG1 1556 aaPredicted RBP12.23□□□□□ -0.45
PTPA-211ENST00000417504 SCAPERQ9BY12 1400 aa12.23□□□□□ -0.45
PTPA-211ENST00000417504 TAOK2Q9UL54 1235 aa12.23□□□□□ -0.45
PTPA-211ENST00000417504 PLXNC1O60486 1568 aa12.22□□□□□ -0.45
PTPA-211ENST00000417504 KDM5CP41229 1560 aa12.22□□□□□ -0.45
PTPA-211ENST00000417504 ARHGEF12Q9NZN5 1544 aa12.22□□□□□ -0.45
PTPA-211ENST00000417504 DENND4BO75064 1496 aaPredicted RBP12.22□□□□□ -0.45
PTPA-211ENST00000417504 POGZQ7Z3K3 1410 aa12.22□□□□□ -0.45
PTPA-211ENST00000417504 CLCN6P51797 869 aa12.22□□□□□ -0.45
PTPA-211ENST00000417504 MS4A3Q96HJ5 214 aa12.22□□□□□ -0.45
PTPA-211ENST00000417504 FRMPD1Q5SYB0 1578 aa12.22□□□□□ -0.45
PTPA-211ENST00000417504 ZFYVE16Q7Z3T8 1539 aa12.21□□□□□ -0.45
PTPA-211ENST00000417504 MBD5Q9P267 1494 aa12.21□□□□□ -0.45
PTPA-211ENST00000417504 C9orf84Q5VXU9 1444 aa12.21□□□□□ -0.45
PTPA-211ENST00000417504 VGFO15240 615 aaPredicted RBP12.21□□□□□ -0.45
PTPA-211ENST00000417504 ATP7AQ04656 1500 aa12.21□□□□□ -0.46
PTPA-211ENST00000417504 COL17A1Q9UMD9 1497 aaPredicted RBP12.21□□□□□ -0.46
PTPA-211ENST00000417504 ABCC5O15440 1437 aa12.2□□□□□ -0.46
PTPA-211ENST00000417504 TRAPPC8Q9Y2L5 1435 aa12.2□□□□□ -0.46
PTPA-211ENST00000417504 HNRNPMP52272 730 aaKnown RBP eCLIP12.19□□□□□ -0.462e-7■■□□□ 14.1
PTPA-211ENST00000417504 ZMYM4Q5VZL5 1548 aa12.19□□□□□ -0.46
PTPA-211ENST00000417504 KIDINS220Q9ULH0 1771 aa12.19□□□□□ -0.46
PTPA-211ENST00000417504 RSPH4AQ5TD94 716 aa12.18□□□□□ -0.46
PTPA-211ENST00000417504 PCGF6Q9BYE7 350 aa12.18□□□□□ -0.46
PTPA-211ENST00000417504 ADGRL2O95490 1459 aa12.18□□□□□ -0.46
PTPA-211ENST00000417504 GALR2O43603 387 aaPredicted RBP12.17□□□□□ -0.46
PTPA-211ENST00000417504 TSPY4P0CV99 314 aa12.17□□□□□ -0.46
PTPA-211ENST00000417504 TSPY10P0CW01 314 aa12.17□□□□□ -0.46
PTPA-211ENST00000417504 ABCA6Q8N139 1617 aa12.17□□□□□ -0.46
PTPA-211ENST00000417504 PDAP1Q13442 181 aaKnown RBP12.16□□□□□ -0.46
PTPA-211ENST00000417504 MYT1LQ9UL68 1186 aa12.16□□□□□ -0.46
PTPA-211ENST00000417504 ANKRD30AQ9BXX3 1397 aa12.16□□□□□ -0.46
PTPA-211ENST00000417504 ARHGEF40Q8TER5 1519 aa12.16□□□□□ -0.46
PTPA-211ENST00000417504 SPAG9O60271 1321 aaKnown RBP12.15□□□□□ -0.46
PTPA-211ENST00000417504 PTPRKQ15262 1439 aa12.15□□□□□ -0.46
PTPA-211ENST00000417504 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.15□□□□□ -0.46
PTPA-211ENST00000417504 GABBR2O75899 941 aa12.15□□□□□ -0.46
PTPA-211ENST00000417504 ZFP91Q96JP5 570 aaPredicted RBP12.15□□□□□ -0.46
PTPA-211ENST00000417504 CHIC2Q9UKJ5 165 aa12.15□□□□□ -0.46
PTPA-211ENST00000417504 RTEL1-TNFRSF6BF6WH68 1400 aa12.14□□□□□ -0.47
PTPA-211ENST00000417504 CHGAP10645 457 aaKnown RBP12.14□□□□□ -0.47
PTPA-211ENST00000417504 PSEN1P49768 467 aa12.14□□□□□ -0.47
PTPA-211ENST00000417504 SP7Q8TDD2 431 aaPredicted RBP12.14□□□□□ -0.47
PTPA-211ENST00000417504 ROCK1Q13464 1354 aa12.14□□□□□ -0.47
PTPA-211ENST00000417504 DIP2CQ9Y2E4 1556 aa12.13□□□□□ -0.47
PTPA-211ENST00000417504 HFM1A2PYH4 1435 aa12.13□□□□□ -0.47
PTPA-211ENST00000417504 DUOX2Q9NRD8 1548 aa12.13□□□□□ -0.47
PTPA-211ENST00000417504 EIF2AK4Q9P2K8 1649 aaKnown RBP12.13□□□□□ -0.47
PTPA-211ENST00000417504 MLH3Q9UHC1 1453 aa12.13□□□□□ -0.47
PTPA-211ENST00000417504 AFAP1Q8N556 730 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms