RNA–Protein interactions for RNA: ENST00000417437.6

VNN3-205, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-205ENST00000417437 ATP7AQ04656 1500 aa10.11□□□□□ -0.79
VNN3-205ENST00000417437 A2MP01023 1474 aa10.1□□□□□ -0.79
VNN3-205ENST00000417437 POLR1AO95602 1720 aaPredicted RBP10.1□□□□□ -0.79
VNN3-205ENST00000417437 CENPBP07199 599 aaPredicted RBP10.1□□□□□ -0.79
VNN3-205ENST00000417437 TCOF1Q13428 1488 aaKnown RBP10.1□□□□□ -0.79
VNN3-205ENST00000417437 ACIN1Q9UKV3 1341 aaKnown RBP10.09□□□□□ -0.79
VNN3-205ENST00000417437 PTPRKQ15262 1439 aa10.09□□□□□ -0.79
VNN3-205ENST00000417437 CPS1P31327 1500 aa10.09□□□□□ -0.79
VNN3-205ENST00000417437 ANKLE2Q86XL3 938 aa10.09□□□□□ -0.79
VNN3-205ENST00000417437 PLEKHH2Q8IVE3 1493 aa10.09□□□□□ -0.79
VNN3-205ENST00000417437 CASKIN1Q8WXD9 1431 aa10.08□□□□□ -0.8
VNN3-205ENST00000417437 DCAF8L1A6NGE4 600 aa10.08□□□□□ -0.8
VNN3-205ENST00000417437 CCNB3Q8WWL7 1395 aa10.08□□□□□ -0.8
VNN3-205ENST00000417437 A2ML1A8K2U0 1454 aa10.08□□□□□ -0.8
VNN3-205ENST00000417437 ADGBQ8N7X0 1667 aa10.08□□□□□ -0.8
VNN3-205ENST00000417437 DNMT1P26358 1616 aaKnown RBP10.07□□□□□ -0.8
VNN3-205ENST00000417437 SHANK2Q9UPX8 1470 aa10.07□□□□□ -0.8
VNN3-205ENST00000417437 APLP2Q06481 763 aa10.07□□□□□ -0.8
VNN3-205ENST00000417437 THEMISQ8N1K5 641 aaPredicted RBP10.07□□□□□ -0.8
VNN3-205ENST00000417437 ZNF316A6NFI3 1004 aaPredicted RBP10.06□□□□□ -0.8
VNN3-205ENST00000417437 GPATCH8Q9UKJ3 1502 aaKnown RBP10.06□□□□□ -0.8
VNN3-205ENST00000417437 TNRQ92752 1358 aa10.05□□□□□ -0.8
VNN3-205ENST00000417437 KIF3BO15066 747 aa10.05□□□□□ -0.8
VNN3-205ENST00000417437 INO80Q9ULG1 1556 aaPredicted RBP10.05□□□□□ -0.8
VNN3-205ENST00000417437 FBXO31Q5XUX0 539 aaPredicted RBP10.04□□□□□ -0.8
VNN3-205ENST00000417437 KIAA1107Q9UPP5 1409 aa10.04□□□□□ -0.8
VNN3-205ENST00000417437 PLXNC1O60486 1568 aa10.04□□□□□ -0.8
VNN3-205ENST00000417437 WASHC2CQ9Y4E1 1318 aa10.04□□□□□ -0.8
VNN3-205ENST00000417437 FYCO1Q9BQS8 1478 aa10.04□□□□□ -0.8
VNN3-205ENST00000417437 MTUS2Q5JR59 1369 aa10.03□□□□□ -0.8
VNN3-205ENST00000417437 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.03□□□□□ -0.8
VNN3-205ENST00000417437 FAM135AQ9P2D6 1515 aa10.02□□□□□ -0.81
VNN3-205ENST00000417437 NPHP4O75161 1426 aaPredicted RBP10.01□□□□□ -0.81
VNN3-205ENST00000417437 VPS8Q8N3P4 1428 aa10.01□□□□□ -0.81
VNN3-205ENST00000417437 NEUROD1Q13562 356 aa10.01□□□□□ -0.81
VNN3-205ENST00000417437 NEURL4Q96JN8 1562 aa10.01□□□□□ -0.81
VNN3-205ENST00000417437 ZNF644Q9H582 1327 aaPredicted RBP10□□□□□ -0.81
VNN3-205ENST00000417437 UGGT1Q9NYU2 1555 aa10□□□□□ -0.81
VNN3-205ENST00000417437 DHX29Q7Z478 1369 aaKnown RBP10□□□□□ -0.81
VNN3-205ENST00000417437 CFAP65Q6ZU64 1925 aaKnown RBP9.99□□□□□ -0.81
VNN3-205ENST00000417437 IQGAP1P46940 1657 aa9.99□□□□□ -0.81
VNN3-205ENST00000417437 RNF39Q9H2S5 420 aa9.99□□□□□ -0.81
VNN3-205ENST00000417437 PZPP20742 1482 aa9.98□□□□□ -0.81
VNN3-205ENST00000417437 KDM5DQ9BY66 1539 aa9.98□□□□□ -0.81
VNN3-205ENST00000417437 VWDEQ8N2E2 1590 aa9.98□□□□□ -0.81
VNN3-205ENST00000417437 MIA2Q96PC5 1412 aa9.98□□□□□ -0.81
VNN3-205ENST00000417437 NLRP1Q9C000 1473 aa9.98□□□□□ -0.81
VNN3-205ENST00000417437 DEPDC5O75140 1603 aa9.97□□□□□ -0.81
VNN3-205ENST00000417437 RTEL1-TNFRSF6BF6WH68 1400 aa9.97□□□□□ -0.81
VNN3-205ENST00000417437 RNF17Q9BXT8 1623 aaKnown RBP9.96□□□□□ -0.81
VNN3-205ENST00000417437 TSPY4P0CV99 314 aa9.96□□□□□ -0.82
VNN3-205ENST00000417437 TSPY10P0CW01 314 aa9.96□□□□□ -0.82
VNN3-205ENST00000417437 RSPH4AQ5TD94 716 aa9.95□□□□□ -0.82
VNN3-205ENST00000417437 MED14O60244 1454 aa9.95□□□□□ -0.82
VNN3-205ENST00000417437 LRRC7Q96NW7 1537 aa9.95□□□□□ -0.82
VNN3-205ENST00000417437 STRCP1A6NGW2 1772 aa9.94□□□□□ -0.82
VNN3-205ENST00000417437 SYNMO15061 1565 aa9.94□□□□□ -0.82
VNN3-205ENST00000417437 GTF3C3Q9Y5Q9 886 aa9.94□□□□□ -0.82
VNN3-205ENST00000417437 TIAM1Q13009 1591 aa9.93□□□□□ -0.82
VNN3-205ENST00000417437 CCDC141Q6ZP82 1450 aa9.93□□□□□ -0.82
VNN3-205ENST00000417437 STAG3Q9UJ98 1225 aa9.93□□□□□ -0.82
VNN3-205ENST00000417437 EID1Q9Y6B2 187 aa9.93□□□□□ -0.82
VNN3-205ENST00000417437 EHBP1L1Q8N3D4 1523 aa9.92□□□□□ -0.82
VNN3-205ENST00000417437 MBD5Q9P267 1494 aa9.92□□□□□ -0.82
VNN3-205ENST00000417437 TXNDC2Q86VQ3 553 aa9.92□□□□□ -0.82
VNN3-205ENST00000417437 ALKQ9UM73 1620 aa9.92□□□□□ -0.82
VNN3-205ENST00000417437 CLSPNQ9HAW4 1339 aa9.91□□□□□ -0.82
VNN3-205ENST00000417437 RGS17Q9UGC6 210 aaPredicted RBP9.91□□□□□ -0.82
VNN3-205ENST00000417437 BCANQ96GW7 911 aa9.9□□□□□ -0.82
VNN3-205ENST00000417437 CAMSAP2Q08AD1 1489 aa9.9□□□□□ -0.83
VNN3-205ENST00000417437 SCAF11Q99590 1463 aaKnown RBP9.9□□□□□ -0.83
VNN3-205ENST00000417437 POTEAQ6S8J7 498 aa9.89□□□□□ -0.83
VNN3-205ENST00000417437 ZC3H13Q5T200 1668 aaKnown RBP9.89□□□□□ -0.83
VNN3-205ENST00000417437 PROSER2Q86WR7 435 aaPredicted RBP9.88□□□□□ -0.83
VNN3-205ENST00000417437 CEP152O94986 1710 aa9.87□□□□□ -0.83
VNN3-205ENST00000417437 UBR1Q8IWV7 1749 aa9.87□□□□□ -0.83
VNN3-205ENST00000417437 ERVK-7P63135 1459 aa9.87□□□□□ -0.83
VNN3-205ENST00000417437 ABCC3O15438 1527 aa9.87□□□□□ -0.83
VNN3-205ENST00000417437 XIRP1Q702N8 1843 aaKnown RBP9.86□□□□□ -0.83
VNN3-205ENST00000417437 LTKP29376 864 aa9.86□□□□□ -0.83
VNN3-205ENST00000417437 MEX3CQ5U5Q3 659 aaKnown RBP9.86□□□□□ -0.83
VNN3-205ENST00000417437 MIER1Q8N108 512 aa9.86□□□□□ -0.83
VNN3-205ENST00000417437 NCOA2Q15596 1464 aa9.85□□□□□ -0.83
VNN3-205ENST00000417437 SETD1AO15047 1707 aaKnown RBP9.85□□□□□ -0.83
VNN3-205ENST00000417437 FAM135BQ49AJ0 1406 aa9.85□□□□□ -0.83
VNN3-205ENST00000417437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.85□□□□□ -0.83
VNN3-205ENST00000417437 ARHGEF5Q12774 1597 aa9.84□□□□□ -0.83
VNN3-205ENST00000417437 ROBO1Q9Y6N7 1651 aa9.84□□□□□ -0.83
VNN3-205ENST00000417437 RBM33Q96EV2 1170 aaKnown RBP9.84□□□□□ -0.83
VNN3-205ENST00000417437 TMEM94Q12767 1356 aa9.84□□□□□ -0.83
VNN3-205ENST00000417437 EIF2AK4Q9P2K8 1649 aaKnown RBP9.83□□□□□ -0.84
VNN3-205ENST00000417437 PHLPP1O60346 1717 aa9.83□□□□□ -0.84
VNN3-205ENST00000417437 KCNA6P17658 529 aa9.82□□□□□ -0.84
VNN3-205ENST00000417437 C14orf37Q86TY3 774 aa9.82□□□□□ -0.84
VNN3-205ENST00000417437 TRIM52Q96A61 297 aa9.82□□□□□ -0.84
VNN3-205ENST00000417437 YTHDC1Q96MU7 727 aaKnown RBP9.82□□□□□ -0.84
VNN3-205ENST00000417437 SLC26A8Q96RN1 970 aa9.82□□□□□ -0.84
VNN3-205ENST00000417437 MSH6P52701 1360 aa9.82□□□□□ -0.84
VNN3-205ENST00000417437 KANK1Q14678 1352 aa9.82□□□□□ -0.84
VNN3-205ENST00000417437 LRRC9Q6ZRR7 1453 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms