RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 MAGI2Q86UL8 1455 aa24.66■■□□□ 1.54
CALD1-204ENST00000417172 TEX14Q8IWB6 1497 aa24.65■■□□□ 1.54
CALD1-204ENST00000417172 DEPDC5O75140 1603 aa24.63■■□□□ 1.53
CALD1-204ENST00000417172 DHX29Q7Z478 1369 aaKnown RBP24.62■■□□□ 1.53
CALD1-204ENST00000417172 EIF2AK4Q9P2K8 1649 aaKnown RBP24.61■■□□□ 1.53
CALD1-204ENST00000417172 A2MP01023 1474 aa24.61■■□□□ 1.53
CALD1-204ENST00000417172 DNAJC5Q9H3Z4 198 aa24.61■■□□□ 1.53
CALD1-204ENST00000417172 TONSLQ96HA7 1378 aa24.6■■□□□ 1.53
CALD1-204ENST00000417172 DIP2CQ9Y2E4 1556 aa24.6■■□□□ 1.53
CALD1-204ENST00000417172 MROH1Q8NDA8 1641 aa24.59■■□□□ 1.53
CALD1-204ENST00000417172 YEATS2Q9ULM3 1422 aa24.58■■□□□ 1.53
CALD1-204ENST00000417172 KIF3BO15066 747 aa24.58■■□□□ 1.53
CALD1-204ENST00000417172 RPRD2Q5VT52 1461 aaKnown RBP24.56■■□□□ 1.52
CALD1-204ENST00000417172 COL17A1Q9UMD9 1497 aaPredicted RBP24.55■■□□□ 1.52
CALD1-204ENST00000417172 ZMYM4Q5VZL5 1548 aa24.54■■□□□ 1.52
CALD1-204ENST00000417172 TIMELESSQ9UNS1 1208 aa24.53■■□□□ 1.52
CALD1-204ENST00000417172 PRDM15P57071 1507 aaPredicted RBP24.53■■□□□ 1.52
CALD1-204ENST00000417172 VWDEQ8N2E2 1590 aa24.51■■□□□ 1.51
CALD1-204ENST00000417172 E9PCH4 1651 aa24.51■■□□□ 1.51
CALD1-204ENST00000417172 RNF17Q9BXT8 1623 aaKnown RBP24.51■■□□□ 1.51
CALD1-204ENST00000417172 PPP1R15AO75807 674 aaPredicted RBP24.5■■□□□ 1.51
CALD1-204ENST00000417172 CEP152O94986 1710 aa24.49■■□□□ 1.51
CALD1-204ENST00000417172 BCORL1Q5H9F3 1711 aa24.48■■□□□ 1.51
CALD1-204ENST00000417172 TET3O43151 1660 aa24.47■■□□□ 1.51
CALD1-204ENST00000417172 PLA2R1Q13018 1463 aa24.47■■□□□ 1.51
CALD1-204ENST00000417172 L3MBTL2Q969R5 705 aa24.46■■□□□ 1.51
CALD1-204ENST00000417172 TRHP20396 242 aaPredicted RBP24.44■■□□□ 1.5
CALD1-204ENST00000417172 KANK1Q14678 1352 aa24.44■■□□□ 1.5
CALD1-204ENST00000417172 ZNF316A6NFI3 1004 aaPredicted RBP24.42■■□□□ 1.5
CALD1-204ENST00000417172 GGT6Q6P531 493 aa24.42■■□□□ 1.5
CALD1-204ENST00000417172 SIGLEC1Q9BZZ2 1709 aa24.42■■□□□ 1.5
CALD1-204ENST00000417172 SPHKAPQ2M3C7 1700 aa24.39■■□□□ 1.5
CALD1-204ENST00000417172 ATP10AO60312 1499 aa24.38■■□□□ 1.49
CALD1-204ENST00000417172 EFCAB6Q5THR3 1501 aa24.38■■□□□ 1.49
CALD1-204ENST00000417172 CCDC144AA2RUR9 1427 aa24.37■■□□□ 1.49
CALD1-204ENST00000417172 CFAP65Q6ZU64 1925 aaKnown RBP24.36■■□□□ 1.49
CALD1-204ENST00000417172 ARHGEF40Q8TER5 1519 aa24.36■■□□□ 1.49
CALD1-204ENST00000417172 LMTK2Q8IWU2 1503 aa24.34■■□□□ 1.49
CALD1-204ENST00000417172 ABCC3O15438 1527 aa24.34■■□□□ 1.49
CALD1-204ENST00000417172 TRPM2O94759 1503 aa24.32■■□□□ 1.48
CALD1-204ENST00000417172 CLTCL1P53675 1640 aa24.31■■□□□ 1.48
CALD1-204ENST00000417172 CAMSAP1Q5T5Y3 1602 aa24.31■■□□□ 1.48
CALD1-204ENST00000417172 REREQ9P2R6 1566 aa24.31■■□□□ 1.48
CALD1-204ENST00000417172 NBPF8Q3BBV2 869 aa24.3■■□□□ 1.48
CALD1-204ENST00000417172 PTPRTO14522 1441 aa24.3■■□□□ 1.48
CALD1-204ENST00000417172 WASHC2CQ9Y4E1 1318 aa24.29■■□□□ 1.48
CALD1-204ENST00000417172 UGGT1Q9NYU2 1555 aa24.28■■□□□ 1.48
CALD1-204ENST00000417172 NPATQ14207 1427 aa24.27■■□□□ 1.48
CALD1-204ENST00000417172 ZC3H13Q5T200 1668 aaKnown RBP24.26■■□□□ 1.47
CALD1-204ENST00000417172 RGL3Q3MIN7 710 aa24.25■■□□□ 1.47
CALD1-204ENST00000417172 HIRIP3Q9BW71 556 aaPredicted RBP24.25■■□□□ 1.47
CALD1-204ENST00000417172 AGLP35573 1532 aa24.24■■□□□ 1.47
CALD1-204ENST00000417172 ZNF326Q5BKZ1 582 aaKnown RBP24.24■■□□□ 1.47
CALD1-204ENST00000417172 KDM2AQ9Y2K7 1162 aa24.22■■□□□ 1.47
CALD1-204ENST00000417172 DCAF11Q8TEB1 546 aa24.22■■□□□ 1.47
CALD1-204ENST00000417172 MLECQ14165 292 aa24.2■■□□□ 1.46
CALD1-204ENST00000417172 SPATA31E1Q6ZUB1 1445 aa24.19■■□□□ 1.46
CALD1-204ENST00000417172 CLTCQ00610 1675 aaKnown RBP24.18■■□□□ 1.46
CALD1-204ENST00000417172 MROH2AA6NES4 1674 aa24.16■■□□□ 1.46
CALD1-204ENST00000417172 KIF1BO60333 1816 aa24.16■■□□□ 1.46
CALD1-204ENST00000417172 DIEXFQ68CQ4 756 aaKnown RBP24.16■■□□□ 1.46
CALD1-204ENST00000417172 UHRF1BP1Q6BDS2 1440 aa24.15■■□□□ 1.46
CALD1-204ENST00000417172 SYNMO15061 1565 aa24.14■■□□□ 1.46
CALD1-204ENST00000417172 PREX1Q8TCU6 1659 aa24.12■■□□□ 1.45
CALD1-204ENST00000417172 ARHGAP31Q2M1Z3 1444 aa24.11■■□□□ 1.45
CALD1-204ENST00000417172 NOS1P29475 1434 aa24.11■■□□□ 1.45
CALD1-204ENST00000417172 CNTLNQ9NXG0 1405 aa24.1■■□□□ 1.45
CALD1-204ENST00000417172 PRAG1Q86YV5 1406 aa24.1■■□□□ 1.45
CALD1-204ENST00000417172 ARID4BQ4LE39 1312 aaPredicted RBP24.09■■□□□ 1.45
CALD1-204ENST00000417172 TRPM1Q7Z4N2 1603 aa24.09■■□□□ 1.45
CALD1-204ENST00000417172 RALGAPBQ86X10 1494 aa24.09■■□□□ 1.45
CALD1-204ENST00000417172 HSPA5P11021 654 aaKnown RBP24.08■■□□□ 1.45
CALD1-204ENST00000417172 PIK3C2BO00750 1634 aa24.08■■□□□ 1.44
CALD1-204ENST00000417172 FBXO31Q5XUX0 539 aaPredicted RBP24.06■■□□□ 1.44
CALD1-204ENST00000417172 ADGRB3O60242 1522 aa24.06■■□□□ 1.44
CALD1-204ENST00000417172 IFT172Q9UG01 1749 aa24.05■■□□□ 1.44
CALD1-204ENST00000417172 NEURL4Q96JN8 1562 aa24.04■■□□□ 1.44
CALD1-204ENST00000417172 MADDQ8WXG6 1647 aa24.04■■□□□ 1.44
CALD1-204ENST00000417172 EIF4G2P78344 907 aaKnown RBP eCLIP24.04■■□□□ 1.44
CALD1-204ENST00000417172 CHGAP10645 457 aaKnown RBP24.03■■□□□ 1.44
CALD1-204ENST00000417172 MYO5BQ9ULV0 1848 aa24.02■■□□□ 1.44
CALD1-204ENST00000417172 ERVK-7P63135 1459 aa24.01■■□□□ 1.43
CALD1-204ENST00000417172 PPP6R1Q9UPN7 881 aa24.01■■□□□ 1.43
CALD1-204ENST00000417172 NBPF1Q3BBV0 1214 aa23.98■■□□□ 1.43
CALD1-204ENST00000417172 ROCK2O75116 1388 aaKnown RBP23.98■■□□□ 1.43
CALD1-204ENST00000417172 PPLO60437 1756 aa23.98■■□□□ 1.43
CALD1-204ENST00000417172 USP47Q96K76 1375 aa23.97■■□□□ 1.43
CALD1-204ENST00000417172 IDI1Q13907 227 aa23.97■■□□□ 1.43
CALD1-204ENST00000417172 CARD11Q9BXL7 1154 aa23.97■■□□□ 1.43
CALD1-204ENST00000417172 SPATA31D1Q6ZQQ2 1576 aa23.95■■□□□ 1.42
CALD1-204ENST00000417172 ESF1Q9H501 851 aaKnown RBP23.94■■□□□ 1.42
CALD1-204ENST00000417172 ZMYM3Q14202 1370 aa23.94■■□□□ 1.42
CALD1-204ENST00000417172 TMEM131LA2VDJ0 1609 aa23.93■■□□□ 1.42
CALD1-204ENST00000417172 MYOM2P54296 1465 aa23.92■■□□□ 1.42
CALD1-204ENST00000417172 ADGRF5Q8IZF2 1346 aa23.92■■□□□ 1.42
CALD1-204ENST00000417172 FER1L4A9Z1Z3 1794 aa23.92■■□□□ 1.42
CALD1-204ENST00000417172 C11orf95C9JLR9 678 aaPredicted RBP23.91■■□□□ 1.42
CALD1-204ENST00000417172 DDX10Q13206 875 aaKnown RBP23.91■■□□□ 1.42
CALD1-204ENST00000417172 SLC52A1Q9NWF4 448 aa23.9■■□□□ 1.42
CALD1-204ENST00000417172 LAMC1P11047 1609 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms