RNA–Protein interactions for RNA: ENST00000417066.5

CCDC148-204, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,447 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-204ENST00000417066 CLTCQ00610 1675 aaKnown RBP29.27■■■□□ 2.28
CCDC148-204ENST00000417066 LMTK3Q96Q04 1460 aa29.24■■■□□ 2.27
CCDC148-204ENST00000417066 WASHC2CQ9Y4E1 1318 aa29.23■■■□□ 2.27
CCDC148-204ENST00000417066 ADGRL2O95490 1459 aa29.23■■■□□ 2.27
CCDC148-204ENST00000417066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.22■■■□□ 2.27
CCDC148-204ENST00000417066 RRBP1Q9P2E9 1410 aaKnown RBP29.21■■■□□ 2.27
CCDC148-204ENST00000417066 MROH2AA6NES4 1674 aa29.21■■■□□ 2.27
CCDC148-204ENST00000417066 ERBINQ96RT1 1412 aa29.2■■■□□ 2.27
CCDC148-204ENST00000417066 EIF2AK4Q9P2K8 1649 aaKnown RBP29.2■■■□□ 2.26
CCDC148-204ENST00000417066 HSPA2P54652 639 aa29.2■■■□□ 2.26
CCDC148-204ENST00000417066 RNF17Q9BXT8 1623 aaKnown RBP29.18■■■□□ 2.26
CCDC148-204ENST00000417066 KDM5DQ9BY66 1539 aa29.17■■■□□ 2.26
CCDC148-204ENST00000417066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.16■■■□□ 2.26
CCDC148-204ENST00000417066 MROH1Q8NDA8 1641 aa29.16■■■□□ 2.26
CCDC148-204ENST00000417066 SETD1BQ9UPS6 1966 aaKnown RBP29.13■■■□□ 2.25
CCDC148-204ENST00000417066 FBXO31Q5XUX0 539 aaPredicted RBP29.12■■■□□ 2.25
CCDC148-204ENST00000417066 NPATQ14207 1427 aa29.11■■■□□ 2.25
CCDC148-204ENST00000417066 ANKRD50Q9ULJ7 1429 aa29.11■■■□□ 2.25
CCDC148-204ENST00000417066 ROCK1Q13464 1354 aa29.1■■■□□ 2.25
CCDC148-204ENST00000417066 PREX1Q8TCU6 1659 aa29.1■■■□□ 2.25
CCDC148-204ENST00000417066 UHRF1BP1Q6BDS2 1440 aa29.1■■■□□ 2.25
CCDC148-204ENST00000417066 ABCC3O15438 1527 aa29.1■■■□□ 2.25
CCDC148-204ENST00000417066 FAM135AQ9P2D6 1515 aa29.09■■■□□ 2.25
CCDC148-204ENST00000417066 PRDM15P57071 1507 aaPredicted RBP29.05■■■□□ 2.24
CCDC148-204ENST00000417066 PZPP20742 1482 aa29.05■■■□□ 2.24
CCDC148-204ENST00000417066 DEPDC5O75140 1603 aa29.04■■■□□ 2.24
CCDC148-204ENST00000417066 CEP152O94986 1710 aa29.03■■■□□ 2.24
CCDC148-204ENST00000417066 KANK1Q14678 1352 aa29.01■■■□□ 2.24
CCDC148-204ENST00000417066 ZC3H13Q5T200 1668 aaKnown RBP29.01■■■□□ 2.23
CCDC148-204ENST00000417066 TNRQ92752 1358 aa28.98■■■□□ 2.23
CCDC148-204ENST00000417066 CAMSAP1Q5T5Y3 1602 aa28.97■■■□□ 2.23
CCDC148-204ENST00000417066 VWDEQ8N2E2 1590 aa28.95■■■□□ 2.23
CCDC148-204ENST00000417066 MYO3AQ8NEV4 1616 aa28.94■■■□□ 2.22
CCDC148-204ENST00000417066 CFAP65Q6ZU64 1925 aaKnown RBP28.93■■■□□ 2.22
CCDC148-204ENST00000417066 ARHGAP31Q2M1Z3 1444 aa28.91■■■□□ 2.22
CCDC148-204ENST00000417066 LMTK2Q8IWU2 1503 aa28.91■■■□□ 2.22
CCDC148-204ENST00000417066 ERVK-7P63135 1459 aa28.9■■■□□ 2.22
CCDC148-204ENST00000417066 CEP170BQ9Y4F5 1589 aaPredicted RBP28.89■■■□□ 2.22
CCDC148-204ENST00000417066 SPATA31D1Q6ZQQ2 1576 aa28.89■■■□□ 2.21
CCDC148-204ENST00000417066 NAIPQ13075 1403 aa28.88■■■□□ 2.21
CCDC148-204ENST00000417066 A2ML1A8K2U0 1454 aa28.87■■■□□ 2.21
CCDC148-204ENST00000417066 UNC13BO14795 1591 aa28.86■■■□□ 2.21
CCDC148-204ENST00000417066 ZNF142P52746 1687 aaPredicted RBP28.85■■■□□ 2.21
CCDC148-204ENST00000417066 NUP155O75694 1391 aa28.84■■■□□ 2.21
CCDC148-204ENST00000417066 STRCQ7RTU9 1775 aa28.84■■■□□ 2.21
CCDC148-204ENST00000417066 NLRP1Q9C000 1473 aa28.82■■■□□ 2.2
CCDC148-204ENST00000417066 EFCAB6Q5THR3 1501 aa28.82■■■□□ 2.2
CCDC148-204ENST00000417066 HFM1A2PYH4 1435 aa28.81■■■□□ 2.2
CCDC148-204ENST00000417066 NCKAP5LQ9HCH0 1330 aa28.8■■■□□ 2.2
CCDC148-204ENST00000417066 GCC2Q8IWJ2 1684 aa28.77■■■□□ 2.2
CCDC148-204ENST00000417066 UGGT1Q9NYU2 1555 aa28.76■■■□□ 2.19
CCDC148-204ENST00000417066 TET3O43151 1660 aa28.75■■■□□ 2.19
CCDC148-204ENST00000417066 IQGAP3Q86VI3 1631 aa28.75■■■□□ 2.19
CCDC148-204ENST00000417066 NOS1P29475 1434 aa28.74■■■□□ 2.19
CCDC148-204ENST00000417066 THEMISQ8N1K5 641 aaPredicted RBP28.74■■■□□ 2.19
CCDC148-204ENST00000417066 DMRT2Q9Y5R5 561 aa28.73■■■□□ 2.19
CCDC148-204ENST00000417066 PLA2R1Q13018 1463 aa28.72■■■□□ 2.19
CCDC148-204ENST00000417066 IDI1Q13907 227 aa28.72■■■□□ 2.19
CCDC148-204ENST00000417066 SYNMO15061 1565 aa28.71■■■□□ 2.19
CCDC148-204ENST00000417066 RPRD2Q5VT52 1461 aaKnown RBP28.71■■■□□ 2.19
CCDC148-204ENST00000417066 TRIM52Q96A61 297 aa28.7■■■□□ 2.19
CCDC148-204ENST00000417066 PKD2Q13563 968 aa28.69■■■□□ 2.18
CCDC148-204ENST00000417066 E9PCH4 1651 aa28.68■■■□□ 2.18
CCDC148-204ENST00000417066 PTPRTO14522 1441 aa28.67■■■□□ 2.18
CCDC148-204ENST00000417066 PIK3C2BO00750 1634 aa28.64■■■□□ 2.18
CCDC148-204ENST00000417066 ANKLE2Q86XL3 938 aa28.64■■■□□ 2.18
CCDC148-204ENST00000417066 STAG3Q9UJ98 1225 aa28.64■■■□□ 2.18
CCDC148-204ENST00000417066 UBR1Q8IWV7 1749 aa28.64■■■□□ 2.17
CCDC148-204ENST00000417066 SLC52A1Q9NWF4 448 aa28.63■■■□□ 2.17
CCDC148-204ENST00000417066 SETD5Q9C0A6 1442 aa28.57■■■□□ 2.16
CCDC148-204ENST00000417066 SLC4A1APQ9BWU0 796 aaKnown RBP28.57■■■□□ 2.16
CCDC148-204ENST00000417066 NEURL4Q96JN8 1562 aa28.57■■■□□ 2.16
CCDC148-204ENST00000417066 LTKP29376 864 aa28.56■■■□□ 2.16
CCDC148-204ENST00000417066 POLR1AO95602 1720 aaPredicted RBP28.54■■■□□ 2.16
CCDC148-204ENST00000417066 TXNDC2Q86VQ3 553 aa28.54■■■□□ 2.16
CCDC148-204ENST00000417066 CHGAP10645 457 aaKnown RBP28.53■■■□□ 2.16
CCDC148-204ENST00000417066 TMEM2Q9UHN6 1383 aa28.53■■■□□ 2.16
CCDC148-204ENST00000417066 ARHGAP23Q9P227 1491 aa28.53■■■□□ 2.16
CCDC148-204ENST00000417066 ADGRB3O60242 1522 aa28.52■■■□□ 2.16
CCDC148-204ENST00000417066 SLIT1O75093 1534 aa28.52■■■□□ 2.16
CCDC148-204ENST00000417066 NPHP4O75161 1426 aaPredicted RBP28.52■■■□□ 2.16
CCDC148-204ENST00000417066 ZNF335Q9H4Z2 1342 aaPredicted RBP28.51■■■□□ 2.15
CCDC148-204ENST00000417066 RAB3GAP2Q9H2M9 1393 aa28.5■■■□□ 2.15
CCDC148-204ENST00000417066 FOXD1Q16676 465 aa28.5■■■□□ 2.15
CCDC148-204ENST00000417066 MED14O60244 1454 aa28.49■■■□□ 2.15
CCDC148-204ENST00000417066 EID1Q9Y6B2 187 aa28.49■■■□□ 2.15
CCDC148-204ENST00000417066 SCAF11Q99590 1463 aaKnown RBP28.48■■■□□ 2.15
CCDC148-204ENST00000417066 KDM5AP29375 1690 aaKnown RBP28.48■■■□□ 2.15
CCDC148-204ENST00000417066 MPHOSPH9Q99550 1183 aa28.47■■■□□ 2.15
CCDC148-204ENST00000417066 CERKQ8TCT0 537 aa28.46■■■□□ 2.15
CCDC148-204ENST00000417066 SPHKAPQ2M3C7 1700 aa28.46■■■□□ 2.15
CCDC148-204ENST00000417066 TMEM131LA2VDJ0 1609 aa28.45■■■□□ 2.15
CCDC148-204ENST00000417066 MYO5BQ9ULV0 1848 aa28.45■■■□□ 2.14
CCDC148-204ENST00000417066 SENP3Q9H4L4 574 aaPredicted RBP28.43■■■□□ 2.14
CCDC148-204ENST00000417066 LTBP4Q8N2S1 1624 aa28.42■■■□□ 2.14
CCDC148-204ENST00000417066 IQGAP1P46940 1657 aa28.41■■■□□ 2.14
CCDC148-204ENST00000417066 NUTM2DQ5VT03 806 aaPredicted RBP28.4■■■□□ 2.14
CCDC148-204ENST00000417066 TRPM2O94759 1503 aa28.39■■■□□ 2.14
CCDC148-204ENST00000417066 RIMS2Q9UQ26 1411 aa28.39■■■□□ 2.13
CCDC148-204ENST00000417066 ZFYVE9O95405 1425 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms