RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 HSPA1LP34931 641 aa12.2□□□□□ -0.46
AP001042.1-201ENST00000416842 ZMYM3Q14202 1370 aa12.19□□□□□ -0.46
AP001042.1-201ENST00000416842 HRCP23327 699 aa12.19□□□□□ -0.46
AP001042.1-201ENST00000416842 PKD2Q13563 968 aa12.19□□□□□ -0.46
AP001042.1-201ENST00000416842 POLR1AO95602 1720 aaPredicted RBP12.19□□□□□ -0.46
AP001042.1-201ENST00000416842 SAMD9LQ8IVG5 1584 aa12.18□□□□□ -0.46
AP001042.1-201ENST00000416842 SCAF1Q9H7N4 1312 aaKnown RBP12.16□□□□□ -0.46
AP001042.1-201ENST00000416842 PTPRKQ15262 1439 aa12.16□□□□□ -0.46
AP001042.1-201ENST00000416842 PLXNC1O60486 1568 aa12.15□□□□□ -0.46
AP001042.1-201ENST00000416842 PIP4K2BP78356 416 aa12.15□□□□□ -0.46
AP001042.1-201ENST00000416842 FAM50AQ14320 339 aaKnown RBP12.15□□□□□ -0.46
AP001042.1-201ENST00000416842 DNMT1P26358 1616 aaKnown RBP12.15□□□□□ -0.47
AP001042.1-201ENST00000416842 NEURL4Q96JN8 1562 aa12.14□□□□□ -0.47
AP001042.1-201ENST00000416842 CPS1P31327 1500 aa12.14□□□□□ -0.47
AP001042.1-201ENST00000416842 ALKQ9UM73 1620 aa12.14□□□□□ -0.47
AP001042.1-201ENST00000416842 SYCP2Q9BX26 1530 aa12.13□□□□□ -0.47
AP001042.1-201ENST00000416842 PTPN23Q9H3S7 1636 aa12.13□□□□□ -0.47
AP001042.1-201ENST00000416842 CFDP1Q9UEE9 299 aaPredicted RBP12.13□□□□□ -0.47
AP001042.1-201ENST00000416842 INO80Q9ULG1 1556 aaPredicted RBP12.13□□□□□ -0.47
AP001042.1-201ENST00000416842 ZNF644Q9H582 1327 aaPredicted RBP12.12□□□□□ -0.47
AP001042.1-201ENST00000416842 ATP7AQ04656 1500 aa12.12□□□□□ -0.47
AP001042.1-201ENST00000416842 A2ML1A8K2U0 1454 aa12.12□□□□□ -0.47
AP001042.1-201ENST00000416842 TOM1O60784 492 aa12.11□□□□□ -0.47
AP001042.1-201ENST00000416842 ABCC5O15440 1437 aa12.11□□□□□ -0.47
AP001042.1-201ENST00000416842 SHANK2Q9UPX8 1470 aa12.1□□□□□ -0.47
AP001042.1-201ENST00000416842 CACNB1Q02641 598 aaPredicted RBP12.1□□□□□ -0.47
AP001042.1-201ENST00000416842 SPAG9O60271 1321 aaKnown RBP12.1□□□□□ -0.47
AP001042.1-201ENST00000416842 ADGBQ8N7X0 1667 aa12.1□□□□□ -0.47
AP001042.1-201ENST00000416842 VWDEQ8N2E2 1590 aa12.09□□□□□ -0.47
AP001042.1-201ENST00000416842 A2MP01023 1474 aa12.09□□□□□ -0.47
AP001042.1-201ENST00000416842 SETD5Q9C0A6 1442 aa12.09□□□□□ -0.47
AP001042.1-201ENST00000416842 MBD5Q9P267 1494 aa12.08□□□□□ -0.47
AP001042.1-201ENST00000416842 ROCK1Q13464 1354 aa12.08□□□□□ -0.48
AP001042.1-201ENST00000416842 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
AP001042.1-201ENST00000416842 KIAA1107Q9UPP5 1409 aa12.08□□□□□ -0.48
AP001042.1-201ENST00000416842 STRCP1A6NGW2 1772 aa12.07□□□□□ -0.48
AP001042.1-201ENST00000416842 HFM1A2PYH4 1435 aa12.07□□□□□ -0.48
AP001042.1-201ENST00000416842 DAPK1P53355 1430 aa12.06□□□□□ -0.48
AP001042.1-201ENST00000416842 ITGAEP38570 1179 aa12.06□□□□□ -0.48
AP001042.1-201ENST00000416842 HNRNPMP52272 730 aaKnown RBP eCLIP12.06□□□□□ -0.48
AP001042.1-201ENST00000416842 GGT6Q6P531 493 aa12.06□□□□□ -0.48
AP001042.1-201ENST00000416842 ZNF777Q9ULD5 760 aaPredicted RBP12.06□□□□□ -0.48
AP001042.1-201ENST00000416842 NAIPQ13075 1403 aa12.05□□□□□ -0.48
AP001042.1-201ENST00000416842 CAMSAP2Q08AD1 1489 aa12.05□□□□□ -0.48
AP001042.1-201ENST00000416842 DEPDC5O75140 1603 aa12.04□□□□□ -0.48
AP001042.1-201ENST00000416842 RAB3GAP2Q9H2M9 1393 aa12.04□□□□□ -0.48
AP001042.1-201ENST00000416842 RNF17Q9BXT8 1623 aaKnown RBP12.03□□□□□ -0.48
AP001042.1-201ENST00000416842 IQGAP1P46940 1657 aa12.03□□□□□ -0.48
AP001042.1-201ENST00000416842 CLSPNQ9HAW4 1339 aa12.02□□□□□ -0.49
AP001042.1-201ENST00000416842 TNRQ92752 1358 aa12.02□□□□□ -0.49
AP001042.1-201ENST00000416842 ADGRL2O95490 1459 aa12.02□□□□□ -0.49
AP001042.1-201ENST00000416842 PLEKHH2Q8IVE3 1493 aa12.02□□□□□ -0.49
AP001042.1-201ENST00000416842 ARHGEF5Q12774 1597 aa12.01□□□□□ -0.49
AP001042.1-201ENST00000416842 ZEB1P37275 1124 aaPredicted RBP12.01□□□□□ -0.49
AP001042.1-201ENST00000416842 RGS17Q9UGC6 210 aaPredicted RBP12.01□□□□□ -0.49
AP001042.1-201ENST00000416842 DHX57Q6P158 1386 aaKnown RBP12.01□□□□□ -0.49
AP001042.1-201ENST00000416842 MED14O60244 1454 aa12.01□□□□□ -0.49
AP001042.1-201ENST00000416842 SYNMO15061 1565 aa12.01□□□□□ -0.49
AP001042.1-201ENST00000416842 FBXO31Q5XUX0 539 aaPredicted RBP12□□□□□ -0.49
AP001042.1-201ENST00000416842 ACIN1Q9UKV3 1341 aaKnown RBP12□□□□□ -0.49
AP001042.1-201ENST00000416842 NPHP4O75161 1426 aaPredicted RBP12□□□□□ -0.49
AP001042.1-201ENST00000416842 PZPP20742 1482 aa12□□□□□ -0.49
AP001042.1-201ENST00000416842 LRRC7Q96NW7 1537 aa11.99□□□□□ -0.49
AP001042.1-201ENST00000416842 XIRP1Q702N8 1843 aaKnown RBP11.99□□□□□ -0.49
AP001042.1-201ENST00000416842 UGGT1Q9NYU2 1555 aa11.98□□□□□ -0.49
AP001042.1-201ENST00000416842 KDM5DQ9BY66 1539 aa11.98□□□□□ -0.49
AP001042.1-201ENST00000416842 ANKLE2Q86XL3 938 aa11.98□□□□□ -0.49
AP001042.1-201ENST00000416842 CCER1Q8TC90 406 aaPredicted RBP11.98□□□□□ -0.49
AP001042.1-201ENST00000416842 CHIC2Q9UKJ5 165 aa11.98□□□□□ -0.49
AP001042.1-201ENST00000416842 TSPY4P0CV99 314 aa11.97□□□□□ -0.49
AP001042.1-201ENST00000416842 TSPY10P0CW01 314 aa11.97□□□□□ -0.49
AP001042.1-201ENST00000416842 RRP7BPQ9NSQ0 103 aa11.97□□□□□ -0.49
AP001042.1-201ENST00000416842 ZC3H13Q5T200 1668 aaKnown RBP11.97□□□□□ -0.49
AP001042.1-201ENST00000416842 FAM135AQ9P2D6 1515 aa11.96□□□□□ -0.49
AP001042.1-201ENST00000416842 NLRP1Q9C000 1473 aa11.96□□□□□ -0.49
AP001042.1-201ENST00000416842 CCDC141Q6ZP82 1450 aa11.95□□□□□ -0.5
AP001042.1-201ENST00000416842 ANKRD30AQ9BXX3 1397 aa11.95□□□□□ -0.5
AP001042.1-201ENST00000416842 SETD1AO15047 1707 aaKnown RBP11.95□□□□□ -0.5
AP001042.1-201ENST00000416842 THEMISQ8N1K5 641 aaPredicted RBP11.95□□□□□ -0.5
AP001042.1-201ENST00000416842 DHX29Q7Z478 1369 aaKnown RBP11.94□□□□□ -0.5
AP001042.1-201ENST00000416842 MAST1Q9Y2H9 1570 aa11.94□□□□□ -0.5
AP001042.1-201ENST00000416842 RTEL1-TNFRSF6BF6WH68 1400 aa11.94□□□□□ -0.5
AP001042.1-201ENST00000416842 CFAP65Q6ZU64 1925 aaKnown RBP11.93□□□□□ -0.5
AP001042.1-201ENST00000416842 CROCC2H7BZ55 1655 aa11.91□□□□□ -0.5
AP001042.1-201ENST00000416842 KIF3BO15066 747 aa11.91□□□□□ -0.5
AP001042.1-201ENST00000416842 POTEAQ6S8J7 498 aa11.91□□□□□ -0.5
AP001042.1-201ENST00000416842 UBR1Q8IWV7 1749 aa11.91□□□□□ -0.5
AP001042.1-201ENST00000416842 GCC2Q8IWJ2 1684 aa11.9□□□□□ -0.5
AP001042.1-201ENST00000416842 WASHC2CQ9Y4E1 1318 aa11.89□□□□□ -0.51
AP001042.1-201ENST00000416842 ANKRD50Q9ULJ7 1429 aa11.88□□□□□ -0.51
AP001042.1-201ENST00000416842 KIF15Q9NS87 1388 aa11.88□□□□□ -0.51
AP001042.1-201ENST00000416842 ROBO1Q9Y6N7 1651 aa11.87□□□□□ -0.51
AP001042.1-201ENST00000416842 ABCC3O15438 1527 aa11.86□□□□□ -0.51
AP001042.1-201ENST00000416842 CEP152O94986 1710 aa11.86□□□□□ -0.51
AP001042.1-201ENST00000416842 MPHOSPH9Q99550 1183 aa11.86□□□□□ -0.51
AP001042.1-201ENST00000416842 FAM135BQ49AJ0 1406 aa11.86□□□□□ -0.51
AP001042.1-201ENST00000416842 ERVK-7P63135 1459 aa11.85□□□□□ -0.51
AP001042.1-201ENST00000416842 SCAF11Q99590 1463 aaKnown RBP11.85□□□□□ -0.51
AP001042.1-201ENST00000416842 TIMELESSQ9UNS1 1208 aa11.84□□□□□ -0.51
AP001042.1-201ENST00000416842 MROH1Q8NDA8 1641 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms