RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 MED1Q15648 1581 aaPredicted RBP26.43■■□□□ 1.82
CDC42EP1-202ENST00000415670 KIF3BO15066 747 aa26.42■■□□□ 1.82
CDC42EP1-202ENST00000415670 MTUS2Q5JR59 1369 aa26.42■■□□□ 1.82
CDC42EP1-202ENST00000415670 TIAM1Q13009 1591 aa26.41■■□□□ 1.82
CDC42EP1-202ENST00000415670 CEP162Q5TB80 1403 aa26.41■■□□□ 1.82
CDC42EP1-202ENST00000415670 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.41■■□□□ 1.82
CDC42EP1-202ENST00000415670 DHX29Q7Z478 1369 aaKnown RBP26.4■■□□□ 1.82
CDC42EP1-202ENST00000415670 TNRQ92752 1358 aa26.4■■□□□ 1.82
CDC42EP1-202ENST00000415670 SHANK2Q9UPX8 1470 aa26.4■■□□□ 1.82
CDC42EP1-202ENST00000415670 ALKQ9UM73 1620 aa26.39■■□□□ 1.81
CDC42EP1-202ENST00000415670 POLR1AO95602 1720 aaPredicted RBP26.38■■□□□ 1.81
CDC42EP1-202ENST00000415670 TOM1O60784 492 aa26.37■■□□□ 1.81
CDC42EP1-202ENST00000415670 VWDEQ8N2E2 1590 aa26.35■■□□□ 1.81
CDC42EP1-202ENST00000415670 ANKLE2Q86XL3 938 aa26.32■■□□□ 1.8
CDC42EP1-202ENST00000415670 WASHC2CQ9Y4E1 1318 aa26.32■■□□□ 1.8
CDC42EP1-202ENST00000415670 RTEL1-TNFRSF6BF6WH68 1400 aa26.31■■□□□ 1.8
CDC42EP1-202ENST00000415670 CPS1P31327 1500 aa26.31■■□□□ 1.8
CDC42EP1-202ENST00000415670 PZPP20742 1482 aa26.3■■□□□ 1.8
CDC42EP1-202ENST00000415670 STRCP1A6NGW2 1772 aa26.3■■□□□ 1.8
CDC42EP1-202ENST00000415670 MIA2Q96PC5 1412 aa26.28■■□□□ 1.8
CDC42EP1-202ENST00000415670 KDM5DQ9BY66 1539 aa26.26■■□□□ 1.79
CDC42EP1-202ENST00000415670 NPHP4O75161 1426 aaPredicted RBP26.26■■□□□ 1.79
CDC42EP1-202ENST00000415670 THEMISQ8N1K5 641 aaPredicted RBP26.25■■□□□ 1.79
CDC42EP1-202ENST00000415670 UGGT1Q9NYU2 1555 aa26.23■■□□□ 1.79
CDC42EP1-202ENST00000415670 CAMSAP2Q08AD1 1489 aa26.23■■□□□ 1.79
CDC42EP1-202ENST00000415670 EHBP1L1Q8N3D4 1523 aa26.22■■□□□ 1.79
CDC42EP1-202ENST00000415670 PHF23Q9BUL5 403 aaPredicted RBP26.21■■□□□ 1.79
CDC42EP1-202ENST00000415670 CCDC141Q6ZP82 1450 aa26.21■■□□□ 1.79
CDC42EP1-202ENST00000415670 MED14O60244 1454 aa26.2■■□□□ 1.78
CDC42EP1-202ENST00000415670 CFAP65Q6ZU64 1925 aaKnown RBP26.2■■□□□ 1.78
CDC42EP1-202ENST00000415670 LRRC7Q96NW7 1537 aa26.18■■□□□ 1.78
CDC42EP1-202ENST00000415670 NCOA2Q15596 1464 aa26.17■■□□□ 1.78
CDC42EP1-202ENST00000415670 RGS17Q9UGC6 210 aaPredicted RBP26.17■■□□□ 1.78
CDC42EP1-202ENST00000415670 IQGAP1P46940 1657 aa26.17■■□□□ 1.78
CDC42EP1-202ENST00000415670 DEPDC5O75140 1603 aa26.16■■□□□ 1.78
CDC42EP1-202ENST00000415670 NLRP1Q9C000 1473 aa26.16■■□□□ 1.78
CDC42EP1-202ENST00000415670 FAM135AQ9P2D6 1515 aa26.15■■□□□ 1.78
CDC42EP1-202ENST00000415670 ABCC3O15438 1527 aa26.1■■□□□ 1.77
CDC42EP1-202ENST00000415670 LTKP29376 864 aa26.1■■□□□ 1.77
CDC42EP1-202ENST00000415670 TSPY4P0CV99 314 aa26.08■■□□□ 1.77
CDC42EP1-202ENST00000415670 TSPY10P0CW01 314 aa26.08■■□□□ 1.77
CDC42EP1-202ENST00000415670 RSPH4AQ5TD94 716 aa26.08■■□□□ 1.77
CDC42EP1-202ENST00000415670 ZC3H13Q5T200 1668 aaKnown RBP26.06■■□□□ 1.76
CDC42EP1-202ENST00000415670 ERVK-7P63135 1459 aa26.06■■□□□ 1.76
CDC42EP1-202ENST00000415670 VPS8Q8N3P4 1428 aa26.05■■□□□ 1.76
CDC42EP1-202ENST00000415670 ARHGEF5Q12774 1597 aa26.05■■□□□ 1.76
CDC42EP1-202ENST00000415670 XIRP1Q702N8 1843 aaKnown RBP26.04■■□□□ 1.76
CDC42EP1-202ENST00000415670 MROH1Q8NDA8 1641 aa26.03■■□□□ 1.76
CDC42EP1-202ENST00000415670 RNF17Q9BXT8 1623 aaKnown RBP26.03■■□□□ 1.76
CDC42EP1-202ENST00000415670 CEP152O94986 1710 aa26.03■■□□□ 1.76
CDC42EP1-202ENST00000415670 UBR1Q8IWV7 1749 aa26.02■■□□□ 1.76
CDC42EP1-202ENST00000415670 TXNDC2Q86VQ3 553 aa26.01■■□□□ 1.75
CDC42EP1-202ENST00000415670 RBM33Q96EV2 1170 aaKnown RBP26.01■■□□□ 1.75
CDC42EP1-202ENST00000415670 KANK4Q5T7N3 995 aaPredicted RBP25.99■■□□□ 1.75
CDC42EP1-202ENST00000415670 POTEAQ6S8J7 498 aa25.97■■□□□ 1.75
CDC42EP1-202ENST00000415670 SCAF11Q99590 1463 aaKnown RBP25.97■■□□□ 1.75
CDC42EP1-202ENST00000415670 SYNMO15061 1565 aa25.95■■□□□ 1.75
CDC42EP1-202ENST00000415670 MAST1Q9Y2H9 1570 aa25.93■■□□□ 1.74
CDC42EP1-202ENST00000415670 ARHGAP23Q9P227 1491 aa25.91■■□□□ 1.74
CDC42EP1-202ENST00000415670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.91■■□□□ 1.74
CDC42EP1-202ENST00000415670 LRRC9Q6ZRR7 1453 aa25.91■■□□□ 1.74
CDC42EP1-202ENST00000415670 RRP7BPQ9NSQ0 103 aa25.89■■□□□ 1.74
CDC42EP1-202ENST00000415670 EIF2AK4Q9P2K8 1649 aaKnown RBP25.88■■□□□ 1.73
CDC42EP1-202ENST00000415670 SLIT1O75093 1534 aa25.88■■□□□ 1.73
CDC42EP1-202ENST00000415670 PIK3C2BO00750 1634 aa25.86■■□□□ 1.73
CDC42EP1-202ENST00000415670 SLC26A8Q96RN1 970 aa25.86■■□□□ 1.73
CDC42EP1-202ENST00000415670 TMEM94Q12767 1356 aa25.84■■□□□ 1.73
CDC42EP1-202ENST00000415670 EID1Q9Y6B2 187 aa25.83■■□□□ 1.73
CDC42EP1-202ENST00000415670 FAM135BQ49AJ0 1406 aa25.82■■□□□ 1.72
CDC42EP1-202ENST00000415670 IDI1Q13907 227 aa25.82■■□□□ 1.72
CDC42EP1-202ENST00000415670 TMEM2Q9UHN6 1383 aa25.82■■□□□ 1.72
CDC42EP1-202ENST00000415670 DUOX2Q9NRD8 1548 aa25.81■■□□□ 1.72
CDC42EP1-202ENST00000415670 PROSER2Q86WR7 435 aaPredicted RBP25.79■■□□□ 1.72
CDC42EP1-202ENST00000415670 KIF15Q9NS87 1388 aa25.79■■□□□ 1.72
CDC42EP1-202ENST00000415670 ARHGAP31Q2M1Z3 1444 aa25.79■■□□□ 1.72
CDC42EP1-202ENST00000415670 MAP3K1Q13233 1512 aa25.78■■□□□ 1.72
CDC42EP1-202ENST00000415670 ROBO1Q9Y6N7 1651 aa25.78■■□□□ 1.72
CDC42EP1-202ENST00000415670 STAG3Q9UJ98 1225 aa25.78■■□□□ 1.72
CDC42EP1-202ENST00000415670 ABCC5O15440 1437 aa25.78■■□□□ 1.72
CDC42EP1-202ENST00000415670 MYOM3Q5VTT5 1437 aa25.78■■□□□ 1.72
CDC42EP1-202ENST00000415670 KCNA6P17658 529 aa25.77■■□□□ 1.72
CDC42EP1-202ENST00000415670 SETD1AO15047 1707 aaKnown RBP25.75■■□□□ 1.71
CDC42EP1-202ENST00000415670 PRDM15P57071 1507 aaPredicted RBP25.75■■□□□ 1.71
CDC42EP1-202ENST00000415670 CHIC2Q9UKJ5 165 aa25.75■■□□□ 1.71
CDC42EP1-202ENST00000415670 TET3O43151 1660 aa25.74■■□□□ 1.71
CDC42EP1-202ENST00000415670 APLP2Q06481 763 aa25.7■■□□□ 1.7
CDC42EP1-202ENST00000415670 EFCAB6Q5THR3 1501 aa25.69■■□□□ 1.7
CDC42EP1-202ENST00000415670 CROCC2H7BZ55 1655 aa25.68■■□□□ 1.7
CDC42EP1-202ENST00000415670 ERBINQ96RT1 1412 aa25.68■■□□□ 1.7
CDC42EP1-202ENST00000415670 BCANQ96GW7 911 aa25.66■■□□□ 1.7
CDC42EP1-202ENST00000415670 SLAIN2Q9P270 581 aa25.66■■□□□ 1.7
CDC42EP1-202ENST00000415670 DAPK1P53355 1430 aa25.64■■□□□ 1.7
CDC42EP1-202ENST00000415670 PTPN23Q9H3S7 1636 aa25.64■■□□□ 1.7
CDC42EP1-202ENST00000415670 PHLPP1O60346 1717 aa25.63■■□□□ 1.69
CDC42EP1-202ENST00000415670 KANK1Q14678 1352 aa25.61■■□□□ 1.69
CDC42EP1-202ENST00000415670 MYO5BQ9ULV0 1848 aa25.6■■□□□ 1.69
CDC42EP1-202ENST00000415670 NOS1P29475 1434 aa25.6■■□□□ 1.69
CDC42EP1-202ENST00000415670 NWD1Q149M9 1564 aa25.58■■□□□ 1.69
CDC42EP1-202ENST00000415670 NUTM2DQ5VT03 806 aaPredicted RBP25.58■■□□□ 1.69
CDC42EP1-202ENST00000415670 KDM5AP29375 1690 aaKnown RBP25.58■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms