RNA–Protein interactions for RNA: ENST00000415482.6

PTPN12-203, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5 BASIC

Gene PTPN12, Length 2,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-203ENST00000415482 KIF3BO15066 747 aa14.41□□□□□ -0.1
PTPN12-203ENST00000415482 ACIN1Q9UKV3 1341 aaKnown RBP14.41□□□□□ -0.1
PTPN12-203ENST00000415482 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
PTPN12-203ENST00000415482 DEPDC5O75140 1603 aa14.4□□□□□ -0.1
PTPN12-203ENST00000415482 FOXD1Q16676 465 aa14.4□□□□□ -0.1
PTPN12-203ENST00000415482 MROH1Q8NDA8 1641 aa14.39□□□□□ -0.11
PTPN12-203ENST00000415482 FAM135AQ9P2D6 1515 aa14.39□□□□□ -0.11
PTPN12-203ENST00000415482 ATP10AO60312 1499 aa14.39□□□□□ -0.11
PTPN12-203ENST00000415482 CLSPNQ9HAW4 1339 aa14.38□□□□□ -0.11
PTPN12-203ENST00000415482 ARHGEF40Q8TER5 1519 aa14.38□□□□□ -0.11
PTPN12-203ENST00000415482 SIGLEC1Q9BZZ2 1709 aa14.38□□□□□ -0.11
PTPN12-203ENST00000415482 IQGAP3Q86VI3 1631 aa14.38□□□□□ -0.11
PTPN12-203ENST00000415482 BCORL1Q5H9F3 1711 aa14.37□□□□□ -0.11
PTPN12-203ENST00000415482 RNF17Q9BXT8 1623 aaKnown RBP14.37□□□□□ -0.11
PTPN12-203ENST00000415482 PKD2Q13563 968 aa14.36□□□□□ -0.11
PTPN12-203ENST00000415482 SIN3AQ96ST3 1273 aa14.36□□□□□ -0.11
PTPN12-203ENST00000415482 PRDM15P57071 1507 aaPredicted RBP14.36□□□□□ -0.11
PTPN12-203ENST00000415482 VWDEQ8N2E2 1590 aa14.35□□□□□ -0.11
PTPN12-203ENST00000415482 REREQ9P2R6 1566 aa14.35□□□□□ -0.11
PTPN12-203ENST00000415482 ZEB1P37275 1124 aaPredicted RBP14.33□□□□□ -0.11
PTPN12-203ENST00000415482 GGT6Q6P531 493 aa14.33□□□□□ -0.11
PTPN12-203ENST00000415482 ANKRD30BQ9BXX2 1392 aa14.32□□□□□ -0.12
PTPN12-203ENST00000415482 KANK1Q14678 1352 aa14.31□□□□□ -0.12
PTPN12-203ENST00000415482 NEUROD1Q13562 356 aa14.31□□□□□ -0.12
PTPN12-203ENST00000415482 CEP152O94986 1710 aa14.31□□□□□ -0.12
PTPN12-203ENST00000415482 AGLP35573 1532 aa14.31□□□□□ -0.12
PTPN12-203ENST00000415482 E9PCH4 1651 aa14.29□□□□□ -0.12
PTPN12-203ENST00000415482 TET3O43151 1660 aa14.29□□□□□ -0.12
PTPN12-203ENST00000415482 ABCC3O15438 1527 aa14.28□□□□□ -0.12
PTPN12-203ENST00000415482 LMTK2Q8IWU2 1503 aa14.27□□□□□ -0.12
PTPN12-203ENST00000415482 PLA2R1Q13018 1463 aa14.27□□□□□ -0.13
PTPN12-203ENST00000415482 WASHC2CQ9Y4E1 1318 aa14.26□□□□□ -0.13
PTPN12-203ENST00000415482 EFCAB6Q5THR3 1501 aa14.25□□□□□ -0.13
PTPN12-203ENST00000415482 MLECQ14165 292 aa14.25□□□□□ -0.13
PTPN12-203ENST00000415482 ARID4BQ4LE39 1312 aaPredicted RBP14.24□□□□□ -0.13
PTPN12-203ENST00000415482 CAMSAP1Q5T5Y3 1602 aa14.23□□□□□ -0.13
PTPN12-203ENST00000415482 ZC3H13Q5T200 1668 aaKnown RBP14.23□□□□□ -0.13
PTPN12-203ENST00000415482 RPRD2Q5VT52 1461 aaKnown RBP14.23□□□□□ -0.13
PTPN12-203ENST00000415482 CFAP65Q6ZU64 1925 aaKnown RBP14.22□□□□□ -0.13
PTPN12-203ENST00000415482 NPATQ14207 1427 aa14.21□□□□□ -0.13
PTPN12-203ENST00000415482 SPHKAPQ2M3C7 1700 aa14.21□□□□□ -0.13
PTPN12-203ENST00000415482 CLTCQ00610 1675 aaKnown RBP14.21□□□□□ -0.14
PTPN12-203ENST00000415482 PTPRTO14522 1441 aa14.2□□□□□ -0.14
PTPN12-203ENST00000415482 TONSLQ96HA7 1378 aa14.19□□□□□ -0.14
PTPN12-203ENST00000415482 PPP6R1Q9UPN7 881 aa14.19□□□□□ -0.14
PTPN12-203ENST00000415482 TRPM2O94759 1503 aa14.19□□□□□ -0.14
PTPN12-203ENST00000415482 CCDC144AA2RUR9 1427 aa14.18□□□□□ -0.14
PTPN12-203ENST00000415482 ARHGAP31Q2M1Z3 1444 aa14.17□□□□□ -0.14
PTPN12-203ENST00000415482 CLTCL1P53675 1640 aa14.17□□□□□ -0.14
PTPN12-203ENST00000415482 UGGT1Q9NYU2 1555 aa14.17□□□□□ -0.14
PTPN12-203ENST00000415482 TIMELESSQ9UNS1 1208 aa14.16□□□□□ -0.14
PTPN12-203ENST00000415482 L3MBTL2Q969R5 705 aa14.16□□□□□ -0.14
PTPN12-203ENST00000415482 FBXO31Q5XUX0 539 aaPredicted RBP14.14□□□□□ -0.15
PTPN12-203ENST00000415482 NOS1P29475 1434 aa14.14□□□□□ -0.15
PTPN12-203ENST00000415482 SYNMO15061 1565 aa14.14□□□□□ -0.15
PTPN12-203ENST00000415482 PREX1Q8TCU6 1659 aa14.14□□□□□ -0.15
PTPN12-203ENST00000415482 PPP1R15AO75807 674 aaPredicted RBP14.14□□□□□ -0.15
PTPN12-203ENST00000415482 CNTLNQ9NXG0 1405 aa14.12□□□□□ -0.15
PTPN12-203ENST00000415482 ZMYM3Q14202 1370 aa14.12□□□□□ -0.15
PTPN12-203ENST00000415482 ESF1Q9H501 851 aaKnown RBP14.12□□□□□ -0.15
PTPN12-203ENST00000415482 FER1L4A9Z1Z3 1794 aa14.11□□□□□ -0.15
PTPN12-203ENST00000415482 ERVK-7P63135 1459 aa14.11□□□□□ -0.15
PTPN12-203ENST00000415482 SPATA31E1Q6ZUB1 1445 aa14.11□□□□□ -0.15
PTPN12-203ENST00000415482 RGL3Q3MIN7 710 aa14.1□□□□□ -0.15
PTPN12-203ENST00000415482 MROH2AA6NES4 1674 aa14.1□□□□□ -0.15
PTPN12-203ENST00000415482 PIK3C2BO00750 1634 aa14.09□□□□□ -0.15
PTPN12-203ENST00000415482 SPATA31D1Q6ZQQ2 1576 aa14.08□□□□□ -0.16
PTPN12-203ENST00000415482 KIF1BO60333 1816 aa14.08□□□□□ -0.16
PTPN12-203ENST00000415482 MADDQ8WXG6 1647 aa14.08□□□□□ -0.16
PTPN12-203ENST00000415482 CEBPAP49715 358 aaPredicted RBP14.07□□□□□ -0.16
PTPN12-203ENST00000415482 ADAMTSL3P82987 1691 aa14.07□□□□□ -0.16
PTPN12-203ENST00000415482 IDI1Q13907 227 aa14.07□□□□□ -0.16
PTPN12-203ENST00000415482 NBPF8Q3BBV2 869 aa14.07□□□□□ -0.16
PTPN12-203ENST00000415482 C3P01024 1663 aa14.06□□□□□ -0.16
PTPN12-203ENST00000415482 DCAF11Q8TEB1 546 aa14.06□□□□□ -0.16
PTPN12-203ENST00000415482 KDM2AQ9Y2K7 1162 aa14.06□□□□□ -0.16
PTPN12-203ENST00000415482 RIMS1Q86UR5 1692 aaKnown RBP14.05□□□□□ -0.16
PTPN12-203ENST00000415482 ADGRB3O60242 1522 aa14.05□□□□□ -0.16
PTPN12-203ENST00000415482 CHGAP10645 457 aaKnown RBP14.04□□□□□ -0.16
PTPN12-203ENST00000415482 NEURL4Q96JN8 1562 aa14.04□□□□□ -0.16
PTPN12-203ENST00000415482 PLPPR3Q6T4P5 718 aa14.03□□□□□ -0.16
PTPN12-203ENST00000415482 SLC52A1Q9NWF4 448 aa14.03□□□□□ -0.16
PTPN12-203ENST00000415482 MYO5BQ9ULV0 1848 aa14.03□□□□□ -0.16
PTPN12-203ENST00000415482 ZNF326Q5BKZ1 582 aaKnown RBP14.03□□□□□ -0.16
PTPN12-203ENST00000415482 TNRQ92752 1358 aa14.01□□□□□ -0.17
PTPN12-203ENST00000415482 TMEM131LA2VDJ0 1609 aa14.01□□□□□ -0.17
PTPN12-203ENST00000415482 UHRF1BP1Q6BDS2 1440 aa14.01□□□□□ -0.17
PTPN12-203ENST00000415482 IFT172Q9UG01 1749 aa14□□□□□ -0.17
PTPN12-203ENST00000415482 PRAG1Q86YV5 1406 aa13.99□□□□□ -0.17
PTPN12-203ENST00000415482 PPLO60437 1756 aa13.98□□□□□ -0.17
PTPN12-203ENST00000415482 NEXMIFQ5QGS0 1516 aa13.96□□□□□ -0.17
PTPN12-203ENST00000415482 A2ML1A8K2U0 1454 aa13.96□□□□□ -0.17
PTPN12-203ENST00000415482 ADGRF5Q8IZF2 1346 aa13.96□□□□□ -0.18
PTPN12-203ENST00000415482 NUTM2DQ5VT03 806 aaPredicted RBP13.96□□□□□ -0.18
PTPN12-203ENST00000415482 MYOM2P54296 1465 aa13.95□□□□□ -0.18
PTPN12-203ENST00000415482 TRPM1Q7Z4N2 1603 aa13.95□□□□□ -0.18
PTPN12-203ENST00000415482 RALGAPBQ86X10 1494 aa13.95□□□□□ -0.18
PTPN12-203ENST00000415482 STAG3Q9UJ98 1225 aa13.95□□□□□ -0.18
PTPN12-203ENST00000415482 RPGRIP1LQ68CZ1 1315 aa13.94□□□□□ -0.18
PTPN12-203ENST00000415482 UBR1Q8IWV7 1749 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms