RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 SPATA31D1Q6ZQQ2 1576 aa34.4■■■■□ 3.1
RHBDD3-204ENST00000414672 CCDC141Q6ZP82 1450 aa34.39■■■■□ 3.1
RHBDD3-204ENST00000414672 WASHC2CQ9Y4E1 1318 aa34.38■■■■□ 3.09
RHBDD3-204ENST00000414672 NCOA2Q15596 1464 aa34.38■■■■□ 3.09
RHBDD3-204ENST00000414672 TNRQ92752 1358 aa34.36■■■■□ 3.09
RHBDD3-204ENST00000414672 CAMSAP2Q08AD1 1489 aa34.36■■■■□ 3.09
RHBDD3-204ENST00000414672 TSPY4P0CV99 314 aa34.33■■■■□ 3.09
RHBDD3-204ENST00000414672 TSPY10P0CW01 314 aa34.33■■■■□ 3.09
RHBDD3-204ENST00000414672 DNMT1P26358 1616 aaKnown RBP34.33■■■■□ 3.09
RHBDD3-204ENST00000414672 KDM5DQ9BY66 1539 aa34.3■■■■□ 3.08
RHBDD3-204ENST00000414672 PZPP20742 1482 aa34.27■■■■□ 3.08
RHBDD3-204ENST00000414672 ANKLE2Q86XL3 938 aa34.25■■■■□ 3.07
RHBDD3-204ENST00000414672 SCAF1Q9H7N4 1312 aaKnown RBP34.25■■■■□ 3.07
RHBDD3-204ENST00000414672 THEMISQ8N1K5 641 aaPredicted RBP34.23■■■■□ 3.07
RHBDD3-204ENST00000414672 FAM135AQ9P2D6 1515 aa34.22■■■■□ 3.07
RHBDD3-204ENST00000414672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.22■■■■□ 3.07
RHBDD3-204ENST00000414672 MIA2Q96PC5 1412 aa34.21■■■■□ 3.07
RHBDD3-204ENST00000414672 PIP4K2BP78356 416 aa34.19■■■■□ 3.06
RHBDD3-204ENST00000414672 ARHGEF5Q12774 1597 aa34.18■■■■□ 3.06
RHBDD3-204ENST00000414672 TOM1O60784 492 aa34.16■■■■□ 3.06
RHBDD3-204ENST00000414672 POLR1AO95602 1720 aaPredicted RBP34.15■■■■□ 3.06
RHBDD3-204ENST00000414672 NEURL4Q96JN8 1562 aa34.15■■■■□ 3.06
RHBDD3-204ENST00000414672 NLRP1Q9C000 1473 aa34.14■■■■□ 3.06
RHBDD3-204ENST00000414672 SHANK2Q9UPX8 1470 aa34.14■■■■□ 3.06
RHBDD3-204ENST00000414672 CPS1P31327 1500 aa34.13■■■■□ 3.05
RHBDD3-204ENST00000414672 LRRC9Q6ZRR7 1453 aa34.12■■■■□ 3.05
RHBDD3-204ENST00000414672 UGGT1Q9NYU2 1555 aa34.11■■■■□ 3.05
RHBDD3-204ENST00000414672 LOC105371045A0A1W2PR82 267 aa34.09■■■■□ 3.05
RHBDD3-204ENST00000414672 HSPA1LP34931 641 aa34.09■■■■□ 3.05
RHBDD3-204ENST00000414672 VPS8Q8N3P4 1428 aa34.09■■■■□ 3.05
RHBDD3-204ENST00000414672 NPHP4O75161 1426 aaPredicted RBP34.08■■■■□ 3.05
RHBDD3-204ENST00000414672 KANK4Q5T7N3 995 aaPredicted RBP34.05■■■■□ 3.04
RHBDD3-204ENST00000414672 ABCC3O15438 1527 aa34.02■■■■□ 3.04
RHBDD3-204ENST00000414672 MED14O60244 1454 aa34.01■■■■□ 3.03
RHBDD3-204ENST00000414672 RNF17Q9BXT8 1623 aaKnown RBP34■■■■□ 3.03
RHBDD3-204ENST00000414672 VWDEQ8N2E2 1590 aa33.99■■■■□ 3.03
RHBDD3-204ENST00000414672 MAST1Q9Y2H9 1570 aa33.99■■■■□ 3.03
RHBDD3-204ENST00000414672 DEPDC5O75140 1603 aa33.97■■■■□ 3.03
RHBDD3-204ENST00000414672 MYOM3Q5VTT5 1437 aa33.96■■■■□ 3.03
RHBDD3-204ENST00000414672 ERVK-7P63135 1459 aa33.95■■■■□ 3.02
RHBDD3-204ENST00000414672 ZC3H13Q5T200 1668 aaKnown RBP33.94■■■■□ 3.02
RHBDD3-204ENST00000414672 EIF2AK4Q9P2K8 1649 aaKnown RBP33.93■■■■□ 3.02
RHBDD3-204ENST00000414672 IQGAP1P46940 1657 aa33.92■■■■□ 3.02
RHBDD3-204ENST00000414672 MAP3K1Q13233 1512 aa33.9■■■■□ 3.02
RHBDD3-204ENST00000414672 SENP3Q9H4L4 574 aaPredicted RBP33.89■■■■□ 3.02
RHBDD3-204ENST00000414672 DUOX2Q9NRD8 1548 aa33.88■■■■□ 3.01
RHBDD3-204ENST00000414672 RRP7BPQ9NSQ0 103 aa33.87■■■■□ 3.01
RHBDD3-204ENST00000414672 MROH1Q8NDA8 1641 aa33.86■■■■□ 3.01
RHBDD3-204ENST00000414672 APLP2Q06481 763 aa33.85■■■■□ 3.01
RHBDD3-204ENST00000414672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.85■■■■□ 3.01
RHBDD3-204ENST00000414672 MED1Q15648 1581 aaPredicted RBP33.85■■■■□ 3.01
RHBDD3-204ENST00000414672 KIF15Q9NS87 1388 aa33.85■■■■□ 3.01
RHBDD3-204ENST00000414672 CEP152O94986 1710 aa33.83■■■■□ 3.01
RHBDD3-204ENST00000414672 TXNDC2Q86VQ3 553 aa33.83■■■■□ 3.01
RHBDD3-204ENST00000414672 CFAP65Q6ZU64 1925 aaKnown RBP33.82■■■■□ 3
RHBDD3-204ENST00000414672 LRRC7Q96NW7 1537 aa33.82■■■■□ 3
RHBDD3-204ENST00000414672 PHF23Q9BUL5 403 aaPredicted RBP33.81■■■■□ 3
RHBDD3-204ENST00000414672 SCAF11Q99590 1463 aaKnown RBP33.8■■■■□ 3
RHBDD3-204ENST00000414672 LTKP29376 864 aa33.79■■■■□ 3
RHBDD3-204ENST00000414672 EID1Q9Y6B2 187 aa33.78■■■■□ 3
RHBDD3-204ENST00000414672 ABCC5O15440 1437 aa33.78■■■■□ 3
RHBDD3-204ENST00000414672 ALKQ9UM73 1620 aa33.77■■■■□ 3
RHBDD3-204ENST00000414672 UBR1Q8IWV7 1749 aa33.76■■■■□ 3
RHBDD3-204ENST00000414672 STAG3Q9UJ98 1225 aa33.76■■■□□ 2.99
RHBDD3-204ENST00000414672 ERBINQ96RT1 1412 aa33.76■■■□□ 2.99
RHBDD3-204ENST00000414672 STRCP1A6NGW2 1772 aa33.75■■■□□ 2.99
RHBDD3-204ENST00000414672 ARHGAP31Q2M1Z3 1444 aa33.75■■■□□ 2.99
RHBDD3-204ENST00000414672 KANK1Q14678 1352 aa33.73■■■□□ 2.99
RHBDD3-204ENST00000414672 PRDM15P57071 1507 aaPredicted RBP33.72■■■□□ 2.99
RHBDD3-204ENST00000414672 SYNMO15061 1565 aa33.72■■■□□ 2.99
RHBDD3-204ENST00000414672 CHIC2Q9UKJ5 165 aa33.7■■■□□ 2.99
RHBDD3-204ENST00000414672 PTPN23Q9H3S7 1636 aa33.69■■■□□ 2.98
RHBDD3-204ENST00000414672 DAPK1P53355 1430 aa33.69■■■□□ 2.98
RHBDD3-204ENST00000414672 ARHGAP23Q9P227 1491 aa33.69■■■□□ 2.98
RHBDD3-204ENST00000414672 SLIT1O75093 1534 aa33.69■■■□□ 2.98
RHBDD3-204ENST00000414672 CROCC2H7BZ55 1655 aa33.65■■■□□ 2.98
RHBDD3-204ENST00000414672 TMEM2Q9UHN6 1383 aa33.64■■■□□ 2.98
RHBDD3-204ENST00000414672 ANKRD30AQ9BXX3 1397 aa33.63■■■□□ 2.97
RHBDD3-204ENST00000414672 FGD6Q6ZV73 1430 aa33.62■■■□□ 2.97
RHBDD3-204ENST00000414672 IDI1Q13907 227 aa33.6■■■□□ 2.97
RHBDD3-204ENST00000414672 PIK3C2BO00750 1634 aa33.6■■■□□ 2.97
RHBDD3-204ENST00000414672 EFCAB6Q5THR3 1501 aa33.54■■■□□ 2.96
RHBDD3-204ENST00000414672 SLC26A8Q96RN1 970 aa33.54■■■□□ 2.96
RHBDD3-204ENST00000414672 BCANQ96GW7 911 aa33.52■■■□□ 2.96
RHBDD3-204ENST00000414672 KCNA6P17658 529 aa33.51■■■□□ 2.95
RHBDD3-204ENST00000414672 LMTK2Q8IWU2 1503 aa33.51■■■□□ 2.95
RHBDD3-204ENST00000414672 TMEM94Q12767 1356 aa33.5■■■□□ 2.95
RHBDD3-204ENST00000414672 PROSER2Q86WR7 435 aaPredicted RBP33.5■■■□□ 2.95
RHBDD3-204ENST00000414672 FAM50AQ14320 339 aaKnown RBP33.48■■■□□ 2.95
RHBDD3-204ENST00000414672 RBM33Q96EV2 1170 aaKnown RBP33.46■■■□□ 2.95
RHBDD3-204ENST00000414672 XIRP1Q702N8 1843 aaKnown RBP33.45■■■□□ 2.95
RHBDD3-204ENST00000414672 SLC52A1Q9NWF4 448 aa33.45■■■□□ 2.95
RHBDD3-204ENST00000414672 FAM135BQ49AJ0 1406 aa33.44■■■□□ 2.94
RHBDD3-204ENST00000414672 NOS1P29475 1434 aa33.43■■■□□ 2.94
RHBDD3-204ENST00000414672 KDM5AP29375 1690 aaKnown RBP33.42■■■□□ 2.94
RHBDD3-204ENST00000414672 ADGRB3O60242 1522 aa33.38■■■□□ 2.93
RHBDD3-204ENST00000414672 RGS17Q9UGC6 210 aaPredicted RBP33.38■■■□□ 2.93
RHBDD3-204ENST00000414672 TET3O43151 1660 aa33.38■■■□□ 2.93
RHBDD3-204ENST00000414672 PPP1R15AO75807 674 aaPredicted RBP33.36■■■□□ 2.93
RHBDD3-204ENST00000414672 ADGRL2O95490 1459 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms