RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-205ENST00000413658 KIF15Q9NS87 1388 aa15.62■□□□□ 0.09
ZNF3-205ENST00000413658 NPM3O75607 178 aaKnown RBP15.61■□□□□ 0.09
ZNF3-205ENST00000413658 RRP7BPQ9NSQ0 103 aa15.6■□□□□ 0.09
ZNF3-205ENST00000413658 EIF2AK4Q9P2K8 1649 aaKnown RBP15.6■□□□□ 0.09
ZNF3-205ENST00000413658 GCC2Q8IWJ2 1684 aa15.6■□□□□ 0.09
ZNF3-205ENST00000413658 RNF17Q9BXT8 1623 aaKnown RBP15.57■□□□□ 0.08
ZNF3-205ENST00000413658 ERBINQ96RT1 1412 aa15.57■□□□□ 0.08
ZNF3-205ENST00000413658 NAIPQ13075 1403 aa15.56■□□□□ 0.08
ZNF3-205ENST00000413658 ADAMTSL3P82987 1691 aa15.56■□□□□ 0.08
ZNF3-205ENST00000413658 DEPDC5O75140 1603 aa15.56■□□□□ 0.08
ZNF3-205ENST00000413658 HFM1A2PYH4 1435 aa15.55■□□□□ 0.08
ZNF3-205ENST00000413658 MROH1Q8NDA8 1641 aa15.55■□□□□ 0.08
ZNF3-205ENST00000413658 ANKRD50Q9ULJ7 1429 aa15.55■□□□□ 0.08
ZNF3-205ENST00000413658 ARID4BQ4LE39 1312 aaPredicted RBP15.53■□□□□ 0.08
ZNF3-205ENST00000413658 FER1L4A9Z1Z3 1794 aa15.52■□□□□ 0.08
ZNF3-205ENST00000413658 KIF3BO15066 747 aa15.51■□□□□ 0.07
ZNF3-205ENST00000413658 TRIM26Q12899 539 aaPredicted RBP15.51■□□□□ 0.07
ZNF3-205ENST00000413658 MADDQ8WXG6 1647 aa15.5■□□□□ 0.07
ZNF3-205ENST00000413658 UNC13BO14795 1591 aa15.5■□□□□ 0.07
ZNF3-205ENST00000413658 PRDM15P57071 1507 aaPredicted RBP15.5■□□□□ 0.07
ZNF3-205ENST00000413658 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
ZNF3-205ENST00000413658 VWDEQ8N2E2 1590 aa15.49■□□□□ 0.07
ZNF3-205ENST00000413658 MLECQ14165 292 aa15.48■□□□□ 0.07
ZNF3-205ENST00000413658 CEP152O94986 1710 aa15.48■□□□□ 0.07
ZNF3-205ENST00000413658 KDM4FA0A1W2PPD8 638 aa15.47■□□□□ 0.07
ZNF3-205ENST00000413658 CLTCQ00610 1675 aaKnown RBP15.47■□□□□ 0.07
ZNF3-205ENST00000413658 RIMS1Q86UR5 1692 aaKnown RBP15.47■□□□□ 0.07
ZNF3-205ENST00000413658 KDM5DQ9BY66 1539 aa15.46■□□□□ 0.07
ZNF3-205ENST00000413658 FAM135AQ9P2D6 1515 aa15.46■□□□□ 0.07
ZNF3-205ENST00000413658 GGT6Q6P531 493 aa15.46■□□□□ 0.07
ZNF3-205ENST00000413658 MROH2AA6NES4 1674 aa15.46■□□□□ 0.07
ZNF3-205ENST00000413658 SETD5Q9C0A6 1442 aa15.46■□□□□ 0.07
ZNF3-205ENST00000413658 ZC3H13Q5T200 1668 aaKnown RBP15.45■□□□□ 0.06
ZNF3-205ENST00000413658 ABCC3O15438 1527 aa15.44■□□□□ 0.06
ZNF3-205ENST00000413658 IQGAP3Q86VI3 1631 aa15.44■□□□□ 0.06
ZNF3-205ENST00000413658 C3P01024 1663 aa15.42■□□□□ 0.06
ZNF3-205ENST00000413658 LMTK2Q8IWU2 1503 aa15.42■□□□□ 0.06
ZNF3-205ENST00000413658 CAMSAP1Q5T5Y3 1602 aa15.42■□□□□ 0.06
ZNF3-205ENST00000413658 RAB3GAP2Q9H2M9 1393 aa15.42■□□□□ 0.06
ZNF3-205ENST00000413658 CNTLNQ9NXG0 1405 aa15.41■□□□□ 0.06
ZNF3-205ENST00000413658 PELP1Q8IZL8 1130 aaKnown RBP15.41■□□□□ 0.06
ZNF3-205ENST00000413658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.4■□□□□ 0.061e-7■■□□□ 12.6
ZNF3-205ENST00000413658 TET3O43151 1660 aa15.39■□□□□ 0.05
ZNF3-205ENST00000413658 PTPRMP28827 1452 aa15.39■□□□□ 0.05
ZNF3-205ENST00000413658 HOXD11P31277 338 aaPredicted RBP15.39■□□□□ 0.05
ZNF3-205ENST00000413658 WASHC2CQ9Y4E1 1318 aa15.39■□□□□ 0.05
ZNF3-205ENST00000413658 CFAP65Q6ZU64 1925 aaKnown RBP15.38■□□□□ 0.05
ZNF3-205ENST00000413658 PZPP20742 1482 aa15.38■□□□□ 0.05
ZNF3-205ENST00000413658 NUP155O75694 1391 aa15.37■□□□□ 0.05
ZNF3-205ENST00000413658 KANK1Q14678 1352 aa15.37■□□□□ 0.05
ZNF3-205ENST00000413658 EFCAB6Q5THR3 1501 aa15.37■□□□□ 0.05
ZNF3-205ENST00000413658 ZMYM3Q14202 1370 aa15.37■□□□□ 0.05
ZNF3-205ENST00000413658 E9PCH4 1651 aa15.36■□□□□ 0.05
ZNF3-205ENST00000413658 HRCP23327 699 aa15.36■□□□□ 0.05
ZNF3-205ENST00000413658 ARHGAP31Q2M1Z3 1444 aa15.35■□□□□ 0.05
ZNF3-205ENST00000413658 MYT1Q01538 1121 aa15.34■□□□□ 0.05
ZNF3-205ENST00000413658 ESF1Q9H501 851 aaKnown RBP15.34■□□□□ 0.05
ZNF3-205ENST00000413658 PREX1Q8TCU6 1659 aa15.33■□□□□ 0.04
ZNF3-205ENST00000413658 NPATQ14207 1427 aa15.33■□□□□ 0.04
ZNF3-205ENST00000413658 CEBPAP49715 358 aaPredicted RBP15.33■□□□□ 0.04
ZNF3-205ENST00000413658 PCGF6Q9BYE7 350 aa15.33■□□□□ 0.04
ZNF3-205ENST00000413658 SETD1BQ9UPS6 1966 aaKnown RBP15.32■□□□□ 0.04
ZNF3-205ENST00000413658 TRIM52Q96A61 297 aa15.32■□□□□ 0.04
ZNF3-205ENST00000413658 ACIN1Q9UKV3 1341 aaKnown RBP15.32■□□□□ 0.04
ZNF3-205ENST00000413658 RPRD2Q5VT52 1461 aaKnown RBP15.31■□□□□ 0.04
ZNF3-205ENST00000413658 SPATA31D1Q6ZQQ2 1576 aa15.3■□□□□ 0.04
ZNF3-205ENST00000413658 ERVK-7P63135 1459 aa15.29■□□□□ 0.04
ZNF3-205ENST00000413658 FBXO31Q5XUX0 539 aaPredicted RBP15.28■□□□□ 0.04
ZNF3-205ENST00000413658 SPHKAPQ2M3C7 1700 aa15.28■□□□□ 0.04
ZNF3-205ENST00000413658 SYNMO15061 1565 aa15.28■□□□□ 0.04
ZNF3-205ENST00000413658 NOS1P29475 1434 aa15.27■□□□□ 0.03
ZNF3-205ENST00000413658 MPHOSPH9Q99550 1183 aa15.26■□□□□ 0.03
ZNF3-205ENST00000413658 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
ZNF3-205ENST00000413658 MYO3AQ8NEV4 1616 aa15.25■□□□□ 0.03
ZNF3-205ENST00000413658 PKD2Q13563 968 aa15.25■□□□□ 0.03
ZNF3-205ENST00000413658 PTPRTO14522 1441 aa15.24■□□□□ 0.03
ZNF3-205ENST00000413658 PLA2R1Q13018 1463 aa15.24■□□□□ 0.03
ZNF3-205ENST00000413658 PIK3C2BO00750 1634 aa15.23■□□□□ 0.03
ZNF3-205ENST00000413658 TNRQ92752 1358 aa15.23■□□□□ 0.03
ZNF3-205ENST00000413658 ZNF142P52746 1687 aaPredicted RBP15.23■□□□□ 0.03
ZNF3-205ENST00000413658 TRPM2O94759 1503 aa15.22■□□□□ 0.03
ZNF3-205ENST00000413658 UGGT1Q9NYU2 1555 aa15.2■□□□□ 0.02
ZNF3-205ENST00000413658 CLTCL1P53675 1640 aa15.19■□□□□ 0.02
ZNF3-205ENST00000413658 NLRP1Q9C000 1473 aa15.19■□□□□ 0.02
ZNF3-205ENST00000413658 MYO5BQ9ULV0 1848 aa15.19■□□□□ 0.02
ZNF3-205ENST00000413658 CEP170BQ9Y4F5 1589 aaPredicted RBP15.19■□□□□ 0.02
ZNF3-205ENST00000413658 DHX57Q6P158 1386 aaKnown RBP15.18■□□□□ 0.02
ZNF3-205ENST00000413658 LMTK3Q96Q04 1460 aa15.18■□□□□ 0.02
ZNF3-205ENST00000413658 KDM5AP29375 1690 aaKnown RBP15.18■□□□□ 0.02
ZNF3-205ENST00000413658 UBR1Q8IWV7 1749 aa15.18■□□□□ 0.02
ZNF3-205ENST00000413658 A2ML1A8K2U0 1454 aa15.17■□□□□ 0.02
ZNF3-205ENST00000413658 UHRF1BP1Q6BDS2 1440 aa15.16■□□□□ 0.02
ZNF3-205ENST00000413658 ANKRD30BQ9BXX2 1392 aa15.16■□□□□ 0.02
ZNF3-205ENST00000413658 IDI1Q13907 227 aa15.16■□□□□ 0.02
ZNF3-205ENST00000413658 TMEM131LA2VDJ0 1609 aa15.16■□□□□ 0.02
ZNF3-205ENST00000413658 KIF1BO60333 1816 aa15.15■□□□□ 0.02
ZNF3-205ENST00000413658 SLC52A1Q9NWF4 448 aa15.15■□□□□ 0.02
ZNF3-205ENST00000413658 ADGRB3O60242 1522 aa15.13■□□□□ 0.01
ZNF3-205ENST00000413658 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
ZNF3-205ENST00000413658 CCDC144AA2RUR9 1427 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms