RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 BICRAQ9NZM4 1560 aa10.2□□□□□ -0.78
NOD1-203ENST00000413433 AK7Q96M32 723 aa10.19□□□□□ -0.78
NOD1-203ENST00000413433 KDM4FA0A1W2PPD8 638 aa10.18□□□□□ -0.78
NOD1-203ENST00000413433 PSEN2P49810 448 aa10.18□□□□□ -0.78
NOD1-203ENST00000413433 KRI1Q8N9T8 703 aaKnown RBP10.18□□□□□ -0.78
NOD1-203ENST00000413433 PTCD2Q8WV60 388 aaKnown RBP10.18□□□□□ -0.78
NOD1-203ENST00000413433 PODXL2Q9NZ53 605 aa10.18□□□□□ -0.78
NOD1-203ENST00000413433 UNC13AQ9UPW8 1703 aa10.18□□□□□ -0.78
NOD1-203ENST00000413433 NCKAP5LQ9HCH0 1330 aa10.17□□□□□ -0.78
NOD1-203ENST00000413433 PPP4R3BQ5MIZ7 849 aa10.17□□□□□ -0.78
NOD1-203ENST00000413433 GPIHBP1Q8IV16 184 aa10.17□□□□□ -0.78
NOD1-203ENST00000413433 RGS20O76081 388 aa10.16□□□□□ -0.78
NOD1-203ENST00000413433 DDX27Q96GQ7 796 aaKnown RBP10.16□□□□□ -0.78
NOD1-203ENST00000413433 KCNH8Q96L42 1107 aa10.15□□□□□ -0.78
NOD1-203ENST00000413433 GPBP1L1Q9HC44 474 aaPredicted RBP10.15□□□□□ -0.78
NOD1-203ENST00000413433 MYO15BQ96JP2 1530 aa10.15□□□□□ -0.78
NOD1-203ENST00000413433 MFSD10Q14728 455 aa10.14□□□□□ -0.79
NOD1-203ENST00000413433 IL27Q8NEV9 243 aa10.13□□□□□ -0.79
NOD1-203ENST00000413433 ZMYND15Q9H091 742 aa10.13□□□□□ -0.79
NOD1-203ENST00000413433 RSPH6AQ9H0K4 717 aa10.13□□□□□ -0.79
NOD1-203ENST00000413433 ARIH1Q9Y4X5 557 aaPredicted RBP10.13□□□□□ -0.79
NOD1-203ENST00000413433 TBC1D12O60347 775 aa10.11□□□□□ -0.79
NOD1-203ENST00000413433 RANGAP1P46060 587 aaPredicted RBP10.11□□□□□ -0.79
NOD1-203ENST00000413433 IFFO2Q5TF58 517 aa10.11□□□□□ -0.79
NOD1-203ENST00000413433 KDM4CQ9H3R0 1056 aa10.11□□□□□ -0.79
NOD1-203ENST00000413433 RBM26Q5T8P6 1007 aaKnown RBP10.1□□□□□ -0.79
NOD1-203ENST00000413433 CRISPLD2Q9H0B8 497 aa10.1□□□□□ -0.79
NOD1-203ENST00000413433 UBTFP17480 764 aaKnown RBP10.09□□□□□ -0.79
NOD1-203ENST00000413433 FOXK1P85037 733 aa10.09□□□□□ -0.79
NOD1-203ENST00000413433 IRX2Q9BZI1 471 aaPredicted RBP10.09□□□□□ -0.79
NOD1-203ENST00000413433 ZCCHC6Q5VYS8 1495 aaKnown RBP10.09□□□□□ -0.79
NOD1-203ENST00000413433 PTPN5P54829 565 aa10.08□□□□□ -0.8
NOD1-203ENST00000413433 PLPP6Q8IY26 295 aa10.08□□□□□ -0.8
NOD1-203ENST00000413433 KCNK17Q96T54 332 aa10.08□□□□□ -0.8
NOD1-203ENST00000413433 GPHNQ9NQX3 736 aaPredicted RBP10.08□□□□□ -0.8
NOD1-203ENST00000413433 DSG2Q14126 1118 aa10.07□□□□□ -0.8
NOD1-203ENST00000413433 CAMK2BQ13554 666 aa10.06□□□□□ -0.8
NOD1-203ENST00000413433 VPS9D1Q9Y2B5 631 aa10.06□□□□□ -0.8
NOD1-203ENST00000413433 CECR2Q9BXF3 1484 aa10.05□□□□□ -0.8
NOD1-203ENST00000413433 SCRIBQ14160 1630 aa10.05□□□□□ -0.8
NOD1-203ENST00000413433 PDE4DQ08499 809 aa10.05□□□□□ -0.8
NOD1-203ENST00000413433 TRIM66O15016 1216 aa10.04□□□□□ -0.8
NOD1-203ENST00000413433 MLLT3P42568 568 aaPredicted RBP10.04□□□□□ -0.8
NOD1-203ENST00000413433 A0A0G2JS52 829 aa10.02□□□□□ -0.81
NOD1-203ENST00000413433 ARID3AQ99856 593 aa10.02□□□□□ -0.81
NOD1-203ENST00000413433 SLC4A5Q9BY07 1137 aa10.02□□□□□ -0.81
NOD1-203ENST00000413433 CC2D2AQ9P2K1 1620 aa10.01□□□□□ -0.81
NOD1-203ENST00000413433 DCAF1Q9Y4B6 1507 aa10.01□□□□□ -0.81
NOD1-203ENST00000413433 THSD4Q6ZMP0 1018 aa10□□□□□ -0.81
NOD1-203ENST00000413433 GOLGA8CPA6NN73 597 aa9.99□□□□□ -0.81
NOD1-203ENST00000413433 PPP1R15BQ5SWA1 713 aa9.99□□□□□ -0.81
NOD1-203ENST00000413433 BCL2L12Q9HB09 334 aa9.98□□□□□ -0.81
NOD1-203ENST00000413433 BHMG1C9JSJ3 638 aaPredicted RBP9.96□□□□□ -0.82
NOD1-203ENST00000413433 EIF4G1Q04637 1599 aaKnown RBP9.96□□□□□ -0.82
NOD1-203ENST00000413433 SPDYE16A6NNV3 312 aaPredicted RBP9.95□□□□□ -0.82
NOD1-203ENST00000413433 TRIM26Q12899 539 aaPredicted RBP9.95□□□□□ -0.82
NOD1-203ENST00000413433 ZNF454Q8N9F8 522 aa9.95□□□□□ -0.82
NOD1-203ENST00000413433 WNT2BQ93097 391 aa9.95□□□□□ -0.82
NOD1-203ENST00000413433 SHROOM4Q9ULL8 1493 aa9.94□□□□□ -0.82
NOD1-203ENST00000413433 DPYSL4O14531 572 aa9.94□□□□□ -0.82
NOD1-203ENST00000413433 PTPREP23469 700 aa9.94□□□□□ -0.82
NOD1-203ENST00000413433 MRPL50Q8N5N7 158 aaKnown RBP9.94□□□□□ -0.82
NOD1-203ENST00000413433 DDRGK1Q96HY6 314 aa9.94□□□□□ -0.82
NOD1-203ENST00000413433 OXER1Q8TDS5 423 aa9.93□□□□□ -0.82
NOD1-203ENST00000413433 FAM117AQ9C073 453 aa9.93□□□□□ -0.82
NOD1-203ENST00000413433 PDIA6Q15084 440 aa9.92□□□□□ -0.82
NOD1-203ENST00000413433 UPF1Q92900 1129 aaKnown RBP eCLIP9.92□□□□□ -0.82
NOD1-203ENST00000413433 FLIIQ13045 1269 aa9.91□□□□□ -0.82
NOD1-203ENST00000413433 ZBED2Q9BTP6 218 aa9.91□□□□□ -0.82
NOD1-203ENST00000413433 NBPF3Q9H094 633 aa9.91□□□□□ -0.82
NOD1-203ENST00000413433 MINK1Q8N4C8 1332 aaPredicted RBP9.89□□□□□ -0.83
NOD1-203ENST00000413433 FOSBP53539 338 aa9.89□□□□□ -0.83
NOD1-203ENST00000413433 ARID3CA6NKF2 412 aa9.87□□□□□ -0.83
NOD1-203ENST00000413433 APBB1O00213 710 aa9.87□□□□□ -0.83
NOD1-203ENST00000413433 CCDC102AQ96A19 550 aa9.87□□□□□ -0.83
NOD1-203ENST00000413433 NUTM2FA1L443 756 aa9.86□□□□□ -0.83
NOD1-203ENST00000413433 GPR37O15354 613 aa9.86□□□□□ -0.83
NOD1-203ENST00000413433 MAP2K5Q13163 448 aa9.86□□□□□ -0.83
NOD1-203ENST00000413433 C1orf115Q9H7X2 142 aa9.86□□□□□ -0.83
NOD1-203ENST00000413433 EMILIN3Q9NT22 766 aa9.86□□□□□ -0.83
NOD1-203ENST00000413433 ITGBL1O95965 494 aaPredicted RBP9.84□□□□□ -0.83
NOD1-203ENST00000413433 Q6ZNB5 142 aa9.84□□□□□ -0.83
NOD1-203ENST00000413433 JPH4Q96JJ6 628 aa9.84□□□□□ -0.83
NOD1-203ENST00000413433 PLEKHG3A1L390 1219 aa9.83□□□□□ -0.84
NOD1-203ENST00000413433 GRXCR2A6NFK2 248 aa9.83□□□□□ -0.84
NOD1-203ENST00000413433 AMHR2Q16671 573 aa9.83□□□□□ -0.84
NOD1-203ENST00000413433 TTLL12Q14166 644 aaPredicted RBP9.82□□□□□ -0.84
NOD1-203ENST00000413433 NPM2Q86SE8 214 aaKnown RBP9.82□□□□□ -0.84
NOD1-203ENST00000413433 PARP9Q8IXQ6 854 aa9.82□□□□□ -0.84
NOD1-203ENST00000413433 ZDHHC16Q969W1 377 aa9.82□□□□□ -0.84
NOD1-203ENST00000413433 ANO8Q9HCE9 1232 aaPredicted RBP9.82□□□□□ -0.84
NOD1-203ENST00000413433 IRF6O14896 467 aa9.81□□□□□ -0.84
NOD1-203ENST00000413433 ANKK1Q8NFD2 765 aa9.81□□□□□ -0.84
NOD1-203ENST00000413433 PDIA4P13667 645 aaKnown RBP9.8□□□□□ -0.84
NOD1-203ENST00000413433 HRCP23327 699 aa9.8□□□□□ -0.84
NOD1-203ENST00000413433 ZBTB7CA1YPR0 619 aa9.79□□□□□ -0.84
NOD1-203ENST00000413433 GNPATO15228 680 aa9.79□□□□□ -0.84
NOD1-203ENST00000413433 ADAM33Q9BZ11 813 aa9.79□□□□□ -0.84
NOD1-203ENST00000413433 GOPCQ9HD26 462 aa9.78□□□□□ -0.84
NOD1-203ENST00000413433 RABGEF1Q9UJ41 708 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms