RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 HSPA2P54652 639 aa29.1■■■□□ 2.25
TRIM56-202ENST00000412507 UHRF1BP1Q6BDS2 1440 aa29.07■■■□□ 2.24
TRIM56-202ENST00000412507 KDM5DQ9BY66 1539 aa29.07■■■□□ 2.24
TRIM56-202ENST00000412507 KIF15Q9NS87 1388 aa29.07■■■□□ 2.24
TRIM56-202ENST00000412507 CHIC2Q9UKJ5 165 aa29.07■■■□□ 2.24
TRIM56-202ENST00000412507 RRP7BPQ9NSQ0 103 aa29.06■■■□□ 2.24
TRIM56-202ENST00000412507 FAM135AQ9P2D6 1515 aa29.05■■■□□ 2.24
TRIM56-202ENST00000412507 NPATQ14207 1427 aa29.03■■■□□ 2.24
TRIM56-202ENST00000412507 CEP152O94986 1710 aa29.03■■■□□ 2.24
TRIM56-202ENST00000412507 MROH1Q8NDA8 1641 aa29.03■■■□□ 2.24
TRIM56-202ENST00000412507 CFAP65Q6ZU64 1925 aaKnown RBP29.02■■■□□ 2.24
TRIM56-202ENST00000412507 ZC3H13Q5T200 1668 aaKnown RBP29.02■■■□□ 2.24
TRIM56-202ENST00000412507 PTPRKQ15262 1439 aa29.02■■■□□ 2.24
TRIM56-202ENST00000412507 ANKRD30AQ9BXX3 1397 aa29.01■■■□□ 2.24
TRIM56-202ENST00000412507 WASHC2CQ9Y4E1 1318 aa29.01■■■□□ 2.23
TRIM56-202ENST00000412507 MYO3AQ8NEV4 1616 aa28.99■■■□□ 2.23
TRIM56-202ENST00000412507 ERBINQ96RT1 1412 aa28.99■■■□□ 2.23
TRIM56-202ENST00000412507 ADGRL2O95490 1459 aa28.98■■■□□ 2.23
TRIM56-202ENST00000412507 NCOA1Q15788 1441 aa28.98■■■□□ 2.23
TRIM56-202ENST00000412507 STRCQ7RTU9 1775 aa28.96■■■□□ 2.23
TRIM56-202ENST00000412507 ABCC3O15438 1527 aa28.95■■■□□ 2.23
TRIM56-202ENST00000412507 DEPDC5O75140 1603 aa28.95■■■□□ 2.23
TRIM56-202ENST00000412507 ZNF142P52746 1687 aaPredicted RBP28.95■■■□□ 2.22
TRIM56-202ENST00000412507 PZPP20742 1482 aa28.93■■■□□ 2.22
TRIM56-202ENST00000412507 CAMSAP1Q5T5Y3 1602 aa28.93■■■□□ 2.22
TRIM56-202ENST00000412507 PRDM15P57071 1507 aaPredicted RBP28.93■■■□□ 2.22
TRIM56-202ENST00000412507 FBXO31Q5XUX0 539 aaPredicted RBP28.89■■■□□ 2.22
TRIM56-202ENST00000412507 CEP170BQ9Y4F5 1589 aaPredicted RBP28.88■■■□□ 2.21
TRIM56-202ENST00000412507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.87■■■□□ 2.21
TRIM56-202ENST00000412507 ITGAEP38570 1179 aa28.85■■■□□ 2.21
TRIM56-202ENST00000412507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.85■■■□□ 2.21
TRIM56-202ENST00000412507 TNRQ92752 1358 aa28.84■■■□□ 2.21
TRIM56-202ENST00000412507 RRBP1Q9P2E9 1410 aaKnown RBP28.82■■■□□ 2.2
TRIM56-202ENST00000412507 ANKRD50Q9ULJ7 1429 aa28.82■■■□□ 2.2
TRIM56-202ENST00000412507 SPATA31D1Q6ZQQ2 1576 aa28.79■■■□□ 2.2
TRIM56-202ENST00000412507 VWDEQ8N2E2 1590 aa28.79■■■□□ 2.2
TRIM56-202ENST00000412507 A2ML1A8K2U0 1454 aa28.79■■■□□ 2.2
TRIM56-202ENST00000412507 ROCK1Q13464 1354 aa28.79■■■□□ 2.2
TRIM56-202ENST00000412507 KANK1Q14678 1352 aa28.79■■■□□ 2.2
TRIM56-202ENST00000412507 ERVK-7P63135 1459 aa28.76■■■□□ 2.19
TRIM56-202ENST00000412507 LMTK2Q8IWU2 1503 aa28.74■■■□□ 2.19
TRIM56-202ENST00000412507 ARHGAP31Q2M1Z3 1444 aa28.73■■■□□ 2.19
TRIM56-202ENST00000412507 UNC13BO14795 1591 aa28.72■■■□□ 2.19
TRIM56-202ENST00000412507 NLRP1Q9C000 1473 aa28.72■■■□□ 2.19
TRIM56-202ENST00000412507 DMRT2Q9Y5R5 561 aa28.71■■■□□ 2.19
TRIM56-202ENST00000412507 POLR1AO95602 1720 aaPredicted RBP28.7■■■□□ 2.19
TRIM56-202ENST00000412507 PLA2R1Q13018 1463 aa28.7■■■□□ 2.18
TRIM56-202ENST00000412507 EFCAB6Q5THR3 1501 aa28.68■■■□□ 2.18
TRIM56-202ENST00000412507 NCKAP5LQ9HCH0 1330 aa28.68■■■□□ 2.18
TRIM56-202ENST00000412507 GCC2Q8IWJ2 1684 aa28.67■■■□□ 2.18
TRIM56-202ENST00000412507 UGGT1Q9NYU2 1555 aa28.67■■■□□ 2.18
TRIM56-202ENST00000412507 PTPRTO14522 1441 aa28.67■■■□□ 2.18
TRIM56-202ENST00000412507 TET3O43151 1660 aa28.67■■■□□ 2.18
TRIM56-202ENST00000412507 UBR1Q8IWV7 1749 aa28.65■■■□□ 2.18
TRIM56-202ENST00000412507 IQGAP3Q86VI3 1631 aa28.61■■■□□ 2.17
TRIM56-202ENST00000412507 PKD2Q13563 968 aa28.6■■■□□ 2.17
TRIM56-202ENST00000412507 PIK3C2BO00750 1634 aa28.59■■■□□ 2.17
TRIM56-202ENST00000412507 THEMISQ8N1K5 641 aaPredicted RBP28.59■■■□□ 2.17
TRIM56-202ENST00000412507 SYNMO15061 1565 aa28.58■■■□□ 2.17
TRIM56-202ENST00000412507 E9PCH4 1651 aa28.58■■■□□ 2.17
TRIM56-202ENST00000412507 NEURL4Q96JN8 1562 aa28.56■■■□□ 2.16
TRIM56-202ENST00000412507 RPRD2Q5VT52 1461 aaKnown RBP28.53■■■□□ 2.16
TRIM56-202ENST00000412507 NOS1P29475 1434 aa28.53■■■□□ 2.16
TRIM56-202ENST00000412507 NAIPQ13075 1403 aa28.53■■■□□ 2.16
TRIM56-202ENST00000412507 NUP155O75694 1391 aa28.52■■■□□ 2.16
TRIM56-202ENST00000412507 MYO5BQ9ULV0 1848 aa28.51■■■□□ 2.15
TRIM56-202ENST00000412507 ILDR1Q86SU0 546 aaPredicted RBP28.51■■■□□ 2.15
TRIM56-202ENST00000412507 KDM5AP29375 1690 aaKnown RBP28.51■■■□□ 2.15
TRIM56-202ENST00000412507 ANKLE2Q86XL3 938 aa28.5■■■□□ 2.15
TRIM56-202ENST00000412507 CERKQ8TCT0 537 aa28.48■■■□□ 2.15
TRIM56-202ENST00000412507 IDI1Q13907 227 aa28.47■■■□□ 2.15
TRIM56-202ENST00000412507 LTBP4Q8N2S1 1624 aa28.47■■■□□ 2.15
TRIM56-202ENST00000412507 HFM1A2PYH4 1435 aa28.46■■■□□ 2.15
TRIM56-202ENST00000412507 IQGAP1P46940 1657 aa28.46■■■□□ 2.15
TRIM56-202ENST00000412507 SLIT1O75093 1534 aa28.43■■■□□ 2.14
TRIM56-202ENST00000412507 MED14O60244 1454 aa28.43■■■□□ 2.14
TRIM56-202ENST00000412507 STAG3Q9UJ98 1225 aa28.43■■■□□ 2.14
TRIM56-202ENST00000412507 ARHGAP23Q9P227 1491 aa28.42■■■□□ 2.14
TRIM56-202ENST00000412507 ADGRB3O60242 1522 aa28.42■■■□□ 2.14
TRIM56-202ENST00000412507 NPHP4O75161 1426 aaPredicted RBP28.42■■■□□ 2.14
TRIM56-202ENST00000412507 ZNF335Q9H4Z2 1342 aaPredicted RBP28.41■■■□□ 2.14
TRIM56-202ENST00000412507 SPHKAPQ2M3C7 1700 aa28.4■■■□□ 2.14
TRIM56-202ENST00000412507 FBXO41Q8TF61 875 aa28.4■■■□□ 2.14
TRIM56-202ENST00000412507 SLC52A1Q9NWF4 448 aa28.4■■■□□ 2.14
TRIM56-202ENST00000412507 SCAF11Q99590 1463 aaKnown RBP28.38■■■□□ 2.13
TRIM56-202ENST00000412507 TMEM131LA2VDJ0 1609 aa28.36■■■□□ 2.13
TRIM56-202ENST00000412507 TMEM2Q9UHN6 1383 aa28.36■■■□□ 2.13
TRIM56-202ENST00000412507 LTKP29376 864 aa28.35■■■□□ 2.13
TRIM56-202ENST00000412507 TXNDC2Q86VQ3 553 aa28.35■■■□□ 2.13
TRIM56-202ENST00000412507 TRIM52Q96A61 297 aa28.32■■■□□ 2.12
TRIM56-202ENST00000412507 EID1Q9Y6B2 187 aa28.31■■■□□ 2.12
TRIM56-202ENST00000412507 STRCP1A6NGW2 1772 aa28.3■■■□□ 2.12
TRIM56-202ENST00000412507 CHGAP10645 457 aaKnown RBP28.26■■■□□ 2.11
TRIM56-202ENST00000412507 IQSEC2Q5JU85 1478 aa28.26■■■□□ 2.11
TRIM56-202ENST00000412507 KIF1BO60333 1816 aa28.23■■■□□ 2.11
TRIM56-202ENST00000412507 CPS1P31327 1500 aa28.23■■■□□ 2.11
TRIM56-202ENST00000412507 CLTCL1P53675 1640 aa28.21■■■□□ 2.11
TRIM56-202ENST00000412507 ZFYVE9O95405 1425 aa28.21■■■□□ 2.11
TRIM56-202ENST00000412507 TRPM2O94759 1503 aa28.21■■■□□ 2.11
TRIM56-202ENST00000412507 RIMS2Q9UQ26 1411 aa28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms