RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 GGT6Q6P531 493 aa21.23■□□□□ 0.99
CPNE1-206ENST00000412056 MROH2AA6NES4 1674 aa21.22■□□□□ 0.99
CPNE1-206ENST00000412056 C3P01024 1663 aa21.21■□□□□ 0.99
CPNE1-206ENST00000412056 DEPDC5O75140 1603 aa21.21■□□□□ 0.99
CPNE1-206ENST00000412056 GCC2Q8IWJ2 1684 aa21.21■□□□□ 0.99
CPNE1-206ENST00000412056 AEBP2Q6ZN18 517 aaPredicted RBP21.2■□□□□ 0.98
CPNE1-206ENST00000412056 CEP152O94986 1710 aa21.2■□□□□ 0.98
CPNE1-206ENST00000412056 ANKRD50Q9ULJ7 1429 aa21.19■□□□□ 0.98
CPNE1-206ENST00000412056 CNTLNQ9NXG0 1405 aa21.18■□□□□ 0.98
CPNE1-206ENST00000412056 PRDM15P57071 1507 aaPredicted RBP21.18■□□□□ 0.98
CPNE1-206ENST00000412056 KDM5DQ9BY66 1539 aa21.18■□□□□ 0.98
CPNE1-206ENST00000412056 FAM135AQ9P2D6 1515 aa21.17■□□□□ 0.98
CPNE1-206ENST00000412056 ZC3H13Q5T200 1668 aaKnown RBP21.17■□□□□ 0.98
CPNE1-206ENST00000412056 ESF1Q9H501 851 aaKnown RBP21.16■□□□□ 0.98
CPNE1-206ENST00000412056 PLPPR3Q6T4P5 718 aa21.15■□□□□ 0.98
CPNE1-206ENST00000412056 ABCC3O15438 1527 aa21.14■□□□□ 0.97
CPNE1-206ENST00000412056 PPP6R1Q9UPN7 881 aa21.13■□□□□ 0.97
CPNE1-206ENST00000412056 UNC13BO14795 1591 aa21.13■□□□□ 0.97
CPNE1-206ENST00000412056 CEBPAP49715 358 aaPredicted RBP21.12■□□□□ 0.97
CPNE1-206ENST00000412056 CAMSAP1Q5T5Y3 1602 aa21.11■□□□□ 0.97
CPNE1-206ENST00000412056 NAIPQ13075 1403 aa21.11■□□□□ 0.97
CPNE1-206ENST00000412056 VWDEQ8N2E2 1590 aa21.1■□□□□ 0.97
CPNE1-206ENST00000412056 HFM1A2PYH4 1435 aa21.1■□□□□ 0.97
CPNE1-206ENST00000412056 ZMYM3Q14202 1370 aa21.1■□□□□ 0.97
CPNE1-206ENST00000412056 CFAP65Q6ZU64 1925 aaKnown RBP21.09■□□□□ 0.97
CPNE1-206ENST00000412056 WASHC2CQ9Y4E1 1318 aa21.08■□□□□ 0.97
CPNE1-206ENST00000412056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.08■□□□□ 0.979e-9■□□□□ 10.7
CPNE1-206ENST00000412056 SETD1BQ9UPS6 1966 aaKnown RBP21.06■□□□□ 0.96
CPNE1-206ENST00000412056 KANK1Q14678 1352 aa21.05■□□□□ 0.96
CPNE1-206ENST00000412056 PREX1Q8TCU6 1659 aa21.05■□□□□ 0.96
CPNE1-206ENST00000412056 PZPP20742 1482 aa21.04■□□□□ 0.96
CPNE1-206ENST00000412056 IQGAP3Q86VI3 1631 aa21.04■□□□□ 0.96
CPNE1-206ENST00000412056 LMTK2Q8IWU2 1503 aa21.04■□□□□ 0.96
CPNE1-206ENST00000412056 TET3O43151 1660 aa21.02■□□□□ 0.96
CPNE1-206ENST00000412056 EFCAB6Q5THR3 1501 aa21■□□□□ 0.95
CPNE1-206ENST00000412056 NPATQ14207 1427 aa21■□□□□ 0.95
CPNE1-206ENST00000412056 MYO3AQ8NEV4 1616 aa20.99■□□□□ 0.95
CPNE1-206ENST00000412056 LMTK3Q96Q04 1460 aa20.97■□□□□ 0.95
CPNE1-206ENST00000412056 ARHGAP31Q2M1Z3 1444 aa20.96■□□□□ 0.95
CPNE1-206ENST00000412056 E9PCH4 1651 aa20.96■□□□□ 0.95
CPNE1-206ENST00000412056 FBXO31Q5XUX0 539 aaPredicted RBP20.96■□□□□ 0.95
CPNE1-206ENST00000412056 SPATA31D1Q6ZQQ2 1576 aa20.96■□□□□ 0.95
CPNE1-206ENST00000412056 NUP155O75694 1391 aa20.96■□□□□ 0.95
CPNE1-206ENST00000412056 ERVK-7P63135 1459 aa20.95■□□□□ 0.94
CPNE1-206ENST00000412056 ZNF142P52746 1687 aaPredicted RBP20.95■□□□□ 0.94
CPNE1-206ENST00000412056 UHRF1BP1Q6BDS2 1440 aa20.94■□□□□ 0.94
CPNE1-206ENST00000412056 SETD5Q9C0A6 1442 aa20.94■□□□□ 0.94
CPNE1-206ENST00000412056 TNRQ92752 1358 aa20.93■□□□□ 0.94
CPNE1-206ENST00000412056 CEP170BQ9Y4F5 1589 aaPredicted RBP20.9■□□□□ 0.94
CPNE1-206ENST00000412056 RPRD2Q5VT52 1461 aaKnown RBP20.89■□□□□ 0.94
CPNE1-206ENST00000412056 SYNMO15061 1565 aa20.89■□□□□ 0.93
CPNE1-206ENST00000412056 RAB3GAP2Q9H2M9 1393 aa20.88■□□□□ 0.93
CPNE1-206ENST00000412056 TRIM52Q96A61 297 aa20.88■□□□□ 0.93
CPNE1-206ENST00000412056 A2ML1A8K2U0 1454 aa20.86■□□□□ 0.93
CPNE1-206ENST00000412056 NOS1P29475 1434 aa20.86■□□□□ 0.93
CPNE1-206ENST00000412056 SPHKAPQ2M3C7 1700 aa20.85■□□□□ 0.93
CPNE1-206ENST00000412056 NLRP1Q9C000 1473 aa20.85■□□□□ 0.93
CPNE1-206ENST00000412056 HSPA2P54652 639 aa20.84■□□□□ 0.93
CPNE1-206ENST00000412056 PIK3C2BO00750 1634 aa20.82■□□□□ 0.92
CPNE1-206ENST00000412056 UBR1Q8IWV7 1749 aa20.81■□□□□ 0.92
CPNE1-206ENST00000412056 TRIM26Q12899 539 aaPredicted RBP20.81■□□□□ 0.92
CPNE1-206ENST00000412056 MYO5BQ9ULV0 1848 aa20.79■□□□□ 0.92
CPNE1-206ENST00000412056 UGGT1Q9NYU2 1555 aa20.79■□□□□ 0.92
CPNE1-206ENST00000412056 STRCQ7RTU9 1775 aa20.79■□□□□ 0.92
CPNE1-206ENST00000412056 SLC4A1APQ9BWU0 796 aaKnown RBP20.78■□□□□ 0.92
CPNE1-206ENST00000412056 PKD2Q13563 968 aa20.76■□□□□ 0.91
CPNE1-206ENST00000412056 KDM5AP29375 1690 aaKnown RBP20.76■□□□□ 0.91
CPNE1-206ENST00000412056 ACIN1Q9UKV3 1341 aaKnown RBP20.75■□□□□ 0.91
CPNE1-206ENST00000412056 PTPRTO14522 1441 aa20.74■□□□□ 0.91
CPNE1-206ENST00000412056 POLR1AO95602 1720 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-206ENST00000412056 ADGRB3O60242 1522 aa20.73■□□□□ 0.91
CPNE1-206ENST00000412056 TRPM2O94759 1503 aa20.73■□□□□ 0.91
CPNE1-206ENST00000412056 IDI1Q13907 227 aa20.73■□□□□ 0.91
CPNE1-206ENST00000412056 MPHOSPH9Q99550 1183 aa20.73■□□□□ 0.91
CPNE1-206ENST00000412056 CLTCL1P53675 1640 aa20.73■□□□□ 0.91
CPNE1-206ENST00000412056 PLA2R1Q13018 1463 aa20.73■□□□□ 0.91
CPNE1-206ENST00000412056 HRCP23327 699 aa20.71■□□□□ 0.91
CPNE1-206ENST00000412056 TMEM131LA2VDJ0 1609 aa20.71■□□□□ 0.91
CPNE1-206ENST00000412056 FOXD1Q16676 465 aa20.7■□□□□ 0.9
CPNE1-206ENST00000412056 SLC52A1Q9NWF4 448 aa20.7■□□□□ 0.9
CPNE1-206ENST00000412056 KIF1BO60333 1816 aa20.69■□□□□ 0.9
CPNE1-206ENST00000412056 THEMISQ8N1K5 641 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-206ENST00000412056 NEURL4Q96JN8 1562 aa20.66■□□□□ 0.9
CPNE1-206ENST00000412056 SLIT1O75093 1534 aa20.65■□□□□ 0.9
CPNE1-206ENST00000412056 ARHGAP23Q9P227 1491 aa20.65■□□□□ 0.9
CPNE1-206ENST00000412056 STAG3Q9UJ98 1225 aa20.65■□□□□ 0.9
CPNE1-206ENST00000412056 NCKAP5LQ9HCH0 1330 aa20.64■□□□□ 0.89
CPNE1-206ENST00000412056 CHGAP10645 457 aaKnown RBP20.62■□□□□ 0.89
CPNE1-206ENST00000412056 TMEM2Q9UHN6 1383 aa20.6■□□□□ 0.89
CPNE1-206ENST00000412056 IQGAP1P46940 1657 aa20.6■□□□□ 0.89
CPNE1-206ENST00000412056 SCAF11Q99590 1463 aaKnown RBP20.59■□□□□ 0.89
CPNE1-206ENST00000412056 ANKLE2Q86XL3 938 aa20.58■□□□□ 0.89
CPNE1-206ENST00000412056 CCDC144AA2RUR9 1427 aa20.57■□□□□ 0.88
CPNE1-206ENST00000412056 ZFYVE9O95405 1425 aa20.57■□□□□ 0.88
CPNE1-206ENST00000412056 RIMS2Q9UQ26 1411 aa20.56■□□□□ 0.88
CPNE1-206ENST00000412056 LTKP29376 864 aa20.56■□□□□ 0.88
CPNE1-206ENST00000412056 MED14O60244 1454 aa20.56■□□□□ 0.88
CPNE1-206ENST00000412056 PCGF6Q9BYE7 350 aa20.55■□□□□ 0.88
CPNE1-206ENST00000412056 ANKRD30BQ9BXX2 1392 aa20.55■□□□□ 0.88
CPNE1-206ENST00000412056 NPHP4O75161 1426 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms