RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 CNTLNQ9NXG0 1405 aa23.4■■□□□ 1.34
TRAPPC12-203ENST00000411973 ANKRD50Q9ULJ7 1429 aa23.4■■□□□ 1.34
TRAPPC12-203ENST00000411973 FAM135AQ9P2D6 1515 aa23.39■■□□□ 1.34
TRAPPC12-203ENST00000411973 DEPDC5O75140 1603 aa23.37■■□□□ 1.33
TRAPPC12-203ENST00000411973 MROH1Q8NDA8 1641 aa23.37■■□□□ 1.33
TRAPPC12-203ENST00000411973 ESF1Q9H501 851 aaKnown RBP23.37■■□□□ 1.33
TRAPPC12-203ENST00000411973 MROH2AA6NES4 1674 aa23.36■■□□□ 1.33
TRAPPC12-203ENST00000411973 AEBP2Q6ZN18 517 aaPredicted RBP23.35■■□□□ 1.33
TRAPPC12-203ENST00000411973 CLTCQ00610 1675 aaKnown RBP23.35■■□□□ 1.33
TRAPPC12-203ENST00000411973 PRDM15P57071 1507 aaPredicted RBP23.34■■□□□ 1.33
TRAPPC12-203ENST00000411973 KDM5DQ9BY66 1539 aa23.33■■□□□ 1.33
TRAPPC12-203ENST00000411973 GCC2Q8IWJ2 1684 aa23.32■■□□□ 1.32
TRAPPC12-203ENST00000411973 HFM1A2PYH4 1435 aa23.32■■□□□ 1.32
TRAPPC12-203ENST00000411973 NAIPQ13075 1403 aa23.32■■□□□ 1.32
TRAPPC12-203ENST00000411973 ZC3H13Q5T200 1668 aaKnown RBP23.32■■□□□ 1.32
TRAPPC12-203ENST00000411973 C3P01024 1663 aa23.31■■□□□ 1.32
TRAPPC12-203ENST00000411973 WASHC2CQ9Y4E1 1318 aa23.31■■□□□ 1.32
TRAPPC12-203ENST00000411973 ZMYM3Q14202 1370 aa23.3■■□□□ 1.32
TRAPPC12-203ENST00000411973 ABCC3O15438 1527 aa23.29■■□□□ 1.32
TRAPPC12-203ENST00000411973 VWDEQ8N2E2 1590 aa23.28■■□□□ 1.32
TRAPPC12-203ENST00000411973 UNC13BO14795 1591 aa23.27■■□□□ 1.32
TRAPPC12-203ENST00000411973 CEBPAP49715 358 aaPredicted RBP23.26■■□□□ 1.31
TRAPPC12-203ENST00000411973 KANK1Q14678 1352 aa23.26■■□□□ 1.31
TRAPPC12-203ENST00000411973 SETD1BQ9UPS6 1966 aaKnown RBP23.25■■□□□ 1.31
TRAPPC12-203ENST00000411973 CEP152O94986 1710 aa23.25■■□□□ 1.31
TRAPPC12-203ENST00000411973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.24■■□□□ 1.313e-8■□□□□ 8.7
TRAPPC12-203ENST00000411973 LMTK2Q8IWU2 1503 aa23.23■■□□□ 1.31
TRAPPC12-203ENST00000411973 CAMSAP1Q5T5Y3 1602 aa23.22■■□□□ 1.31
TRAPPC12-203ENST00000411973 NPATQ14207 1427 aa23.21■■□□□ 1.31
TRAPPC12-203ENST00000411973 PZPP20742 1482 aa23.21■■□□□ 1.31
TRAPPC12-203ENST00000411973 PLPPR3Q6T4P5 718 aa23.2■■□□□ 1.3
TRAPPC12-203ENST00000411973 ARHGAP31Q2M1Z3 1444 aa23.18■■□□□ 1.3
TRAPPC12-203ENST00000411973 IQGAP3Q86VI3 1631 aa23.18■■□□□ 1.3
TRAPPC12-203ENST00000411973 NUP155O75694 1391 aa23.15■■□□□ 1.3
TRAPPC12-203ENST00000411973 TET3O43151 1660 aa23.15■■□□□ 1.3
TRAPPC12-203ENST00000411973 PREX1Q8TCU6 1659 aa23.14■■□□□ 1.29
TRAPPC12-203ENST00000411973 SETD5Q9C0A6 1442 aa23.14■■□□□ 1.29
TRAPPC12-203ENST00000411973 EFCAB6Q5THR3 1501 aa23.13■■□□□ 1.29
TRAPPC12-203ENST00000411973 FBXO31Q5XUX0 539 aaPredicted RBP23.12■■□□□ 1.29
TRAPPC12-203ENST00000411973 CFAP65Q6ZU64 1925 aaKnown RBP23.12■■□□□ 1.29
TRAPPC12-203ENST00000411973 ACIN1Q9UKV3 1341 aaKnown RBP23.1■■□□□ 1.29
TRAPPC12-203ENST00000411973 SPATA31D1Q6ZQQ2 1576 aa23.1■■□□□ 1.29
TRAPPC12-203ENST00000411973 RPRD2Q5VT52 1461 aaKnown RBP23.1■■□□□ 1.29
TRAPPC12-203ENST00000411973 LMTK3Q96Q04 1460 aa23.1■■□□□ 1.29
TRAPPC12-203ENST00000411973 ERVK-7P63135 1459 aa23.09■■□□□ 1.29
TRAPPC12-203ENST00000411973 UHRF1BP1Q6BDS2 1440 aa23.08■■□□□ 1.28
TRAPPC12-203ENST00000411973 TNRQ92752 1358 aa23.07■■□□□ 1.28
TRAPPC12-203ENST00000411973 TRIM26Q12899 539 aaPredicted RBP23.06■■□□□ 1.28
TRAPPC12-203ENST00000411973 MYO3AQ8NEV4 1616 aa23.06■■□□□ 1.28
TRAPPC12-203ENST00000411973 E9PCH4 1651 aa23.06■■□□□ 1.28
TRAPPC12-203ENST00000411973 RAB3GAP2Q9H2M9 1393 aa23.05■■□□□ 1.28
TRAPPC12-203ENST00000411973 TRIM52Q96A61 297 aa23.05■■□□□ 1.28
TRAPPC12-203ENST00000411973 ZNF142P52746 1687 aaPredicted RBP23.03■■□□□ 1.28
TRAPPC12-203ENST00000411973 NOS1P29475 1434 aa23.03■■□□□ 1.28
TRAPPC12-203ENST00000411973 HRCP23327 699 aa23.03■■□□□ 1.28
TRAPPC12-203ENST00000411973 NLRP1Q9C000 1473 aa23.03■■□□□ 1.28
TRAPPC12-203ENST00000411973 CEP170BQ9Y4F5 1589 aaPredicted RBP23.01■■□□□ 1.27
TRAPPC12-203ENST00000411973 A2ML1A8K2U0 1454 aa22.99■■□□□ 1.27
TRAPPC12-203ENST00000411973 SYNMO15061 1565 aa22.98■■□□□ 1.27
TRAPPC12-203ENST00000411973 SLC4A1APQ9BWU0 796 aaKnown RBP22.97■■□□□ 1.27
TRAPPC12-203ENST00000411973 PTPRTO14522 1441 aa22.94■■□□□ 1.26
TRAPPC12-203ENST00000411973 SLC52A1Q9NWF4 448 aa22.94■■□□□ 1.26
TRAPPC12-203ENST00000411973 HSPA2P54652 639 aa22.93■■□□□ 1.26
TRAPPC12-203ENST00000411973 PKD2Q13563 968 aa22.93■■□□□ 1.26
TRAPPC12-203ENST00000411973 MPHOSPH9Q99550 1183 aa22.93■■□□□ 1.26
TRAPPC12-203ENST00000411973 SPHKAPQ2M3C7 1700 aa22.93■■□□□ 1.26
TRAPPC12-203ENST00000411973 PIK3C2BO00750 1634 aa22.91■■□□□ 1.26
TRAPPC12-203ENST00000411973 UGGT1Q9NYU2 1555 aa22.91■■□□□ 1.26
TRAPPC12-203ENST00000411973 KDM5AP29375 1690 aaKnown RBP22.9■■□□□ 1.26
TRAPPC12-203ENST00000411973 IDI1Q13907 227 aa22.9■■□□□ 1.26
TRAPPC12-203ENST00000411973 UBR1Q8IWV7 1749 aa22.89■■□□□ 1.26
TRAPPC12-203ENST00000411973 THEMISQ8N1K5 641 aaPredicted RBP22.88■■□□□ 1.25
TRAPPC12-203ENST00000411973 PLA2R1Q13018 1463 aa22.87■■□□□ 1.25
TRAPPC12-203ENST00000411973 TRPM2O94759 1503 aa22.87■■□□□ 1.25
TRAPPC12-203ENST00000411973 STRCQ7RTU9 1775 aa22.84■■□□□ 1.25
TRAPPC12-203ENST00000411973 ADGRB3O60242 1522 aa22.83■■□□□ 1.25
TRAPPC12-203ENST00000411973 FOXD1Q16676 465 aa22.82■■□□□ 1.24
TRAPPC12-203ENST00000411973 TMEM131LA2VDJ0 1609 aa22.81■■□□□ 1.24
TRAPPC12-203ENST00000411973 CLTCL1P53675 1640 aa22.8■■□□□ 1.24
TRAPPC12-203ENST00000411973 STAG3Q9UJ98 1225 aa22.8■■□□□ 1.24
TRAPPC12-203ENST00000411973 ARHGAP23Q9P227 1491 aa22.79■■□□□ 1.24
TRAPPC12-203ENST00000411973 SLIT1O75093 1534 aa22.79■■□□□ 1.24
TRAPPC12-203ENST00000411973 MYO5BQ9ULV0 1848 aa22.78■■□□□ 1.24
TRAPPC12-203ENST00000411973 POLR1AO95602 1720 aaPredicted RBP22.77■■□□□ 1.23
TRAPPC12-203ENST00000411973 TMEM2Q9UHN6 1383 aa22.76■■□□□ 1.23
TRAPPC12-203ENST00000411973 KIF1BO60333 1816 aa22.75■■□□□ 1.23
TRAPPC12-203ENST00000411973 ANKLE2Q86XL3 938 aa22.75■■□□□ 1.23
TRAPPC12-203ENST00000411973 NCKAP5LQ9HCH0 1330 aa22.75■■□□□ 1.23
TRAPPC12-203ENST00000411973 DMRT2Q9Y5R5 561 aa22.74■■□□□ 1.23
TRAPPC12-203ENST00000411973 CCDC144AA2RUR9 1427 aa22.73■■□□□ 1.23
TRAPPC12-203ENST00000411973 CHGAP10645 457 aaKnown RBP22.72■■□□□ 1.23
TRAPPC12-203ENST00000411973 ANKRD30BQ9BXX2 1392 aa22.72■■□□□ 1.23
TRAPPC12-203ENST00000411973 MED14O60244 1454 aa22.72■■□□□ 1.23
TRAPPC12-203ENST00000411973 NEURL4Q96JN8 1562 aa22.72■■□□□ 1.23
TRAPPC12-203ENST00000411973 PCGF6Q9BYE7 350 aa22.71■■□□□ 1.23
TRAPPC12-203ENST00000411973 LTKP29376 864 aa22.7■■□□□ 1.22
TRAPPC12-203ENST00000411973 EID1Q9Y6B2 187 aa22.7■■□□□ 1.22
TRAPPC12-203ENST00000411973 ZFYVE9O95405 1425 aa22.7■■□□□ 1.22
TRAPPC12-203ENST00000411973 SCAF11Q99590 1463 aaKnown RBP22.7■■□□□ 1.22
TRAPPC12-203ENST00000411973 TXNDC2Q86VQ3 553 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 351.9 ms