RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 MROH1Q8NDA8 1641 aa23.63■■□□□ 1.37
AP001056.1-201ENST00000411956 PRDM15P57071 1507 aaPredicted RBP23.6■■□□□ 1.37
AP001056.1-201ENST00000411956 KIF3BO15066 747 aa23.59■■□□□ 1.37
AP001056.1-201ENST00000411956 ARID4BQ4LE39 1312 aaPredicted RBP23.56■■□□□ 1.36
AP001056.1-201ENST00000411956 KDM5DQ9BY66 1539 aa23.54■■□□□ 1.36
AP001056.1-201ENST00000411956 VWDEQ8N2E2 1590 aa23.54■■□□□ 1.36
AP001056.1-201ENST00000411956 IQGAP3Q86VI3 1631 aa23.52■■□□□ 1.36
AP001056.1-201ENST00000411956 ZC3H13Q5T200 1668 aaKnown RBP23.51■■□□□ 1.35
AP001056.1-201ENST00000411956 FAM135AQ9P2D6 1515 aa23.51■■□□□ 1.35
AP001056.1-201ENST00000411956 HRCP23327 699 aa23.5■■□□□ 1.35
AP001056.1-201ENST00000411956 GGT6Q6P531 493 aa23.5■■□□□ 1.35
AP001056.1-201ENST00000411956 CEP152O94986 1710 aa23.5■■□□□ 1.35
AP001056.1-201ENST00000411956 MLECQ14165 292 aa23.49■■□□□ 1.35
AP001056.1-201ENST00000411956 ABCC3O15438 1527 aa23.49■■□□□ 1.35
AP001056.1-201ENST00000411956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.47■■□□□ 1.35
AP001056.1-201ENST00000411956 NUP155O75694 1391 aa23.47■■□□□ 1.35
AP001056.1-201ENST00000411956 KANK1Q14678 1352 aa23.47■■□□□ 1.35
AP001056.1-201ENST00000411956 ADAMTSL3P82987 1691 aa23.47■■□□□ 1.35
AP001056.1-201ENST00000411956 FER1L4A9Z1Z3 1794 aa23.46■■□□□ 1.35
AP001056.1-201ENST00000411956 PZPP20742 1482 aa23.46■■□□□ 1.35
AP001056.1-201ENST00000411956 LMTK2Q8IWU2 1503 aa23.46■■□□□ 1.35
AP001056.1-201ENST00000411956 ACIN1Q9UKV3 1341 aaKnown RBP23.46■■□□□ 1.35
AP001056.1-201ENST00000411956 CLTCQ00610 1675 aaKnown RBP23.45■■□□□ 1.34
AP001056.1-201ENST00000411956 TRIM52Q96A61 297 aa23.45■■□□□ 1.34
AP001056.1-201ENST00000411956 MADDQ8WXG6 1647 aa23.44■■□□□ 1.34
AP001056.1-201ENST00000411956 TET3O43151 1660 aa23.44■■□□□ 1.34
AP001056.1-201ENST00000411956 CAMSAP1Q5T5Y3 1602 aa23.43■■□□□ 1.34
AP001056.1-201ENST00000411956 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
AP001056.1-201ENST00000411956 EFCAB6Q5THR3 1501 aa23.41■■□□□ 1.34
AP001056.1-201ENST00000411956 MROH2AA6NES4 1674 aa23.4■■□□□ 1.34
AP001056.1-201ENST00000411956 WASHC2CQ9Y4E1 1318 aa23.39■■□□□ 1.34
AP001056.1-201ENST00000411956 CNTLNQ9NXG0 1405 aa23.39■■□□□ 1.33
AP001056.1-201ENST00000411956 RIMS1Q86UR5 1692 aaKnown RBP23.38■■□□□ 1.33
AP001056.1-201ENST00000411956 E9PCH4 1651 aa23.36■■□□□ 1.33
AP001056.1-201ENST00000411956 ESF1Q9H501 851 aaKnown RBP23.34■■□□□ 1.33
AP001056.1-201ENST00000411956 DHX57Q6P158 1386 aaKnown RBP23.33■■□□□ 1.33
AP001056.1-201ENST00000411956 MPHOSPH9Q99550 1183 aa23.33■■□□□ 1.33
AP001056.1-201ENST00000411956 SLC4A1APQ9BWU0 796 aaKnown RBP23.33■■□□□ 1.33
AP001056.1-201ENST00000411956 ARHGAP31Q2M1Z3 1444 aa23.33■■□□□ 1.32
AP001056.1-201ENST00000411956 NPATQ14207 1427 aa23.32■■□□□ 1.32
AP001056.1-201ENST00000411956 C3P01024 1663 aa23.32■■□□□ 1.32
AP001056.1-201ENST00000411956 RPRD2Q5VT52 1461 aaKnown RBP23.3■■□□□ 1.32
AP001056.1-201ENST00000411956 ZMYM3Q14202 1370 aa23.28■■□□□ 1.32
AP001056.1-201ENST00000411956 PKD2Q13563 968 aa23.28■■□□□ 1.32
AP001056.1-201ENST00000411956 PREX1Q8TCU6 1659 aa23.27■■□□□ 1.32
AP001056.1-201ENST00000411956 SPHKAPQ2M3C7 1700 aa23.25■■□□□ 1.31
AP001056.1-201ENST00000411956 SPATA31D1Q6ZQQ2 1576 aa23.25■■□□□ 1.31
AP001056.1-201ENST00000411956 PTPRMP28827 1452 aa23.24■■□□□ 1.31
AP001056.1-201ENST00000411956 ERVK-7P63135 1459 aa23.24■■□□□ 1.31
AP001056.1-201ENST00000411956 KDM4FA0A1W2PPD8 638 aa23.24■■□□□ 1.31
AP001056.1-201ENST00000411956 FOXD1Q16676 465 aa23.23■■□□□ 1.31
AP001056.1-201ENST00000411956 NOS1P29475 1434 aa23.22■■□□□ 1.31
AP001056.1-201ENST00000411956 TRPM2O94759 1503 aa23.22■■□□□ 1.31
AP001056.1-201ENST00000411956 PTPRTO14522 1441 aa23.21■■□□□ 1.31
AP001056.1-201ENST00000411956 SYNMO15061 1565 aa23.21■■□□□ 1.31
AP001056.1-201ENST00000411956 PLA2R1Q13018 1463 aa23.19■■□□□ 1.3
AP001056.1-201ENST00000411956 CEBPAP49715 358 aaPredicted RBP23.19■■□□□ 1.3
AP001056.1-201ENST00000411956 FBXO31Q5XUX0 539 aaPredicted RBP23.17■■□□□ 1.3
AP001056.1-201ENST00000411956 ANKRD30BQ9BXX2 1392 aa23.15■■□□□ 1.3
AP001056.1-201ENST00000411956 PLPPR3Q6T4P5 718 aa23.15■■□□□ 1.3
AP001056.1-201ENST00000411956 PIK3C2BO00750 1634 aa23.15■■□□□ 1.3
AP001056.1-201ENST00000411956 CLTCL1P53675 1640 aa23.15■■□□□ 1.3
AP001056.1-201ENST00000411956 UGGT1Q9NYU2 1555 aa23.14■■□□□ 1.3
AP001056.1-201ENST00000411956 CFAP65Q6ZU64 1925 aaKnown RBP23.14■■□□□ 1.3
AP001056.1-201ENST00000411956 TNRQ92752 1358 aa23.13■■□□□ 1.29
AP001056.1-201ENST00000411956 MYO3AQ8NEV4 1616 aa23.12■■□□□ 1.29
AP001056.1-201ENST00000411956 CCER1Q8TC90 406 aaPredicted RBP23.1■■□□□ 1.29
AP001056.1-201ENST00000411956 CCDC144AA2RUR9 1427 aa23.09■■□□□ 1.29
AP001056.1-201ENST00000411956 NLRP1Q9C000 1473 aa23.06■■□□□ 1.28
AP001056.1-201ENST00000411956 CLSPNQ9HAW4 1339 aa23.06■■□□□ 1.28
AP001056.1-201ENST00000411956 ZNF142P52746 1687 aaPredicted RBP23.05■■□□□ 1.28
AP001056.1-201ENST00000411956 ADGRB3O60242 1522 aa23.03■■□□□ 1.28
AP001056.1-201ENST00000411956 SLC52A1Q9NWF4 448 aa23.03■■□□□ 1.28
AP001056.1-201ENST00000411956 CEP170BQ9Y4F5 1589 aaPredicted RBP23.02■■□□□ 1.28
AP001056.1-201ENST00000411956 KIF1BO60333 1816 aa23.01■■□□□ 1.27
AP001056.1-201ENST00000411956 IDI1Q13907 227 aa23.01■■□□□ 1.27
AP001056.1-201ENST00000411956 TMEM131LA2VDJ0 1609 aa23■■□□□ 1.27
AP001056.1-201ENST00000411956 KDM5AP29375 1690 aaKnown RBP23■■□□□ 1.27
AP001056.1-201ENST00000411956 A2ML1A8K2U0 1454 aa23■■□□□ 1.27
AP001056.1-201ENST00000411956 SIN3AQ96ST3 1273 aa23■■□□□ 1.27
AP001056.1-201ENST00000411956 UHRF1BP1Q6BDS2 1440 aa22.99■■□□□ 1.27
AP001056.1-201ENST00000411956 UBR1Q8IWV7 1749 aa22.99■■□□□ 1.27
AP001056.1-201ENST00000411956 NEURL4Q96JN8 1562 aa22.99■■□□□ 1.27
AP001056.1-201ENST00000411956 SPATA31E1Q6ZUB1 1445 aa22.98■■□□□ 1.27
AP001056.1-201ENST00000411956 MYO5BQ9ULV0 1848 aa22.96■■□□□ 1.27
AP001056.1-201ENST00000411956 SETD1BQ9UPS6 1966 aaKnown RBP22.95■■□□□ 1.26
AP001056.1-201ENST00000411956 NEUROD1Q13562 356 aa22.93■■□□□ 1.26
AP001056.1-201ENST00000411956 CHGAP10645 457 aaKnown RBP22.92■■□□□ 1.26
AP001056.1-201ENST00000411956 LMTK3Q96Q04 1460 aa22.9■■□□□ 1.26
AP001056.1-201ENST00000411956 IFT172Q9UG01 1749 aa22.89■■□□□ 1.26
AP001056.1-201ENST00000411956 STAG3Q9UJ98 1225 aa22.89■■□□□ 1.25
AP001056.1-201ENST00000411956 NEXMIFQ5QGS0 1516 aa22.88■■□□□ 1.25
AP001056.1-201ENST00000411956 SLIT1O75093 1534 aa22.87■■□□□ 1.25
AP001056.1-201ENST00000411956 PPLO60437 1756 aa22.86■■□□□ 1.25
AP001056.1-201ENST00000411956 TONSLQ96HA7 1378 aa22.86■■□□□ 1.25
AP001056.1-201ENST00000411956 ARHGAP23Q9P227 1491 aa22.85■■□□□ 1.25
AP001056.1-201ENST00000411956 RGL3Q3MIN7 710 aa22.85■■□□□ 1.25
AP001056.1-201ENST00000411956 ZFYVE9O95405 1425 aa22.84■■□□□ 1.25
AP001056.1-201ENST00000411956 TMEM2Q9UHN6 1383 aa22.84■■□□□ 1.25
AP001056.1-201ENST00000411956 ZNF326Q5BKZ1 582 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms