RNA–Protein interactions for RNA: ENST00000411591.5

PCYT1A-202, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 1,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-202ENST00000411591 PIP4K2BP78356 416 aa23.4■■□□□ 1.34
PCYT1A-202ENST00000411591 DHX29Q7Z478 1369 aaKnown RBP23.4■■□□□ 1.34
PCYT1A-202ENST00000411591 TNRQ92752 1358 aa23.4■■□□□ 1.34
PCYT1A-202ENST00000411591 ZNF644Q9H582 1327 aaPredicted RBP23.39■■□□□ 1.34
PCYT1A-202ENST00000411591 SCAF1Q9H7N4 1312 aaKnown RBP23.39■■□□□ 1.34
PCYT1A-202ENST00000411591 PZPP20742 1482 aa23.37■■□□□ 1.33
PCYT1A-202ENST00000411591 FBXO31Q5XUX0 539 aaPredicted RBP23.37■■□□□ 1.33
PCYT1A-202ENST00000411591 MTUS2Q5JR59 1369 aa23.37■■□□□ 1.33
PCYT1A-202ENST00000411591 TIAM1Q13009 1591 aa23.36■■□□□ 1.33
PCYT1A-202ENST00000411591 VWDEQ8N2E2 1590 aa23.35■■□□□ 1.33
PCYT1A-202ENST00000411591 FAM135AQ9P2D6 1515 aa23.35■■□□□ 1.33
PCYT1A-202ENST00000411591 ALKQ9UM73 1620 aa23.34■■□□□ 1.33
PCYT1A-202ENST00000411591 KDM5DQ9BY66 1539 aa23.33■■□□□ 1.33
PCYT1A-202ENST00000411591 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.32■■□□□ 1.321e-6■■■■■ 48.1
PCYT1A-202ENST00000411591 ANKLE2Q86XL3 938 aa23.32■■□□□ 1.32
PCYT1A-202ENST00000411591 MED14O60244 1454 aa23.31■■□□□ 1.32
PCYT1A-202ENST00000411591 KIF3BO15066 747 aa23.3■■□□□ 1.32
PCYT1A-202ENST00000411591 MIA2Q96PC5 1412 aa23.29■■□□□ 1.32
PCYT1A-202ENST00000411591 NLRP1Q9C000 1473 aa23.29■■□□□ 1.32
PCYT1A-202ENST00000411591 EHBP1L1Q8N3D4 1523 aa23.28■■□□□ 1.32
PCYT1A-202ENST00000411591 NPHP4O75161 1426 aaPredicted RBP23.28■■□□□ 1.32
PCYT1A-202ENST00000411591 THEMISQ8N1K5 641 aaPredicted RBP23.28■■□□□ 1.32
PCYT1A-202ENST00000411591 DEPDC5O75140 1603 aa23.28■■□□□ 1.32
PCYT1A-202ENST00000411591 CEP162Q5TB80 1403 aa23.27■■□□□ 1.32
PCYT1A-202ENST00000411591 UGGT1Q9NYU2 1555 aa23.27■■□□□ 1.32
PCYT1A-202ENST00000411591 CCDC141Q6ZP82 1450 aa23.26■■□□□ 1.31
PCYT1A-202ENST00000411591 WASHC2CQ9Y4E1 1318 aa23.26■■□□□ 1.31
PCYT1A-202ENST00000411591 PHF23Q9BUL5 403 aaPredicted RBP23.24■■□□□ 1.31
PCYT1A-202ENST00000411591 IQGAP1P46940 1657 aa23.2■■□□□ 1.3
PCYT1A-202ENST00000411591 LRRC7Q96NW7 1537 aa23.2■■□□□ 1.3
PCYT1A-202ENST00000411591 CAMSAP2Q08AD1 1489 aa23.2■■□□□ 1.3
PCYT1A-202ENST00000411591 RSPH4AQ5TD94 716 aa23.2■■□□□ 1.3
PCYT1A-202ENST00000411591 STRCP1A6NGW2 1772 aa23.18■■□□□ 1.3
PCYT1A-202ENST00000411591 RNF17Q9BXT8 1623 aaKnown RBP23.16■■□□□ 1.3
PCYT1A-202ENST00000411591 SYNMO15061 1565 aa23.16■■□□□ 1.3
PCYT1A-202ENST00000411591 NCOA2Q15596 1464 aa23.14■■□□□ 1.29
PCYT1A-202ENST00000411591 ARHGEF5Q12774 1597 aa23.14■■□□□ 1.29
PCYT1A-202ENST00000411591 ABCC3O15438 1527 aa23.13■■□□□ 1.29
PCYT1A-202ENST00000411591 ERVK-7P63135 1459 aa23.11■■□□□ 1.29
PCYT1A-202ENST00000411591 ZC3H13Q5T200 1668 aaKnown RBP23.09■■□□□ 1.29
PCYT1A-202ENST00000411591 SENP3Q9H4L4 574 aaPredicted RBP23.09■■□□□ 1.29
PCYT1A-202ENST00000411591 RGS17Q9UGC6 210 aaPredicted RBP23.09■■□□□ 1.29
PCYT1A-202ENST00000411591 TSPY4P0CV99 314 aa23.08■■□□□ 1.29
PCYT1A-202ENST00000411591 TSPY10P0CW01 314 aa23.08■■□□□ 1.29
PCYT1A-202ENST00000411591 SCAF11Q99590 1463 aaKnown RBP23.05■■□□□ 1.28
PCYT1A-202ENST00000411591 MAST1Q9Y2H9 1570 aa23.04■■□□□ 1.28
PCYT1A-202ENST00000411591 MROH1Q8NDA8 1641 aa23.04■■□□□ 1.28
PCYT1A-202ENST00000411591 UBR1Q8IWV7 1749 aa23.03■■□□□ 1.28
PCYT1A-202ENST00000411591 EIF2AK4Q9P2K8 1649 aaKnown RBP23.03■■□□□ 1.28
PCYT1A-202ENST00000411591 ARHGAP23Q9P227 1491 aa23.03■■□□□ 1.28
PCYT1A-202ENST00000411591 LTKP29376 864 aa23.01■■□□□ 1.27
PCYT1A-202ENST00000411591 SLIT1O75093 1534 aa23■■□□□ 1.27
PCYT1A-202ENST00000411591 XIRP1Q702N8 1843 aaKnown RBP22.98■■□□□ 1.27
PCYT1A-202ENST00000411591 TXNDC2Q86VQ3 553 aa22.96■■□□□ 1.27
PCYT1A-202ENST00000411591 FAM135BQ49AJ0 1406 aa22.96■■□□□ 1.27
PCYT1A-202ENST00000411591 CEP152O94986 1710 aa22.95■■□□□ 1.26
PCYT1A-202ENST00000411591 ARHGAP31Q2M1Z3 1444 aa22.94■■□□□ 1.26
PCYT1A-202ENST00000411591 DUOX2Q9NRD8 1548 aa22.91■■□□□ 1.26
PCYT1A-202ENST00000411591 LRRC9Q6ZRR7 1453 aa22.91■■□□□ 1.26
PCYT1A-202ENST00000411591 POTEAQ6S8J7 498 aa22.9■■□□□ 1.26
PCYT1A-202ENST00000411591 PRDM15P57071 1507 aaPredicted RBP22.89■■□□□ 1.26
PCYT1A-202ENST00000411591 CFAP65Q6ZU64 1925 aaKnown RBP22.89■■□□□ 1.25
PCYT1A-202ENST00000411591 EID1Q9Y6B2 187 aa22.89■■□□□ 1.25
PCYT1A-202ENST00000411591 TMEM2Q9UHN6 1383 aa22.89■■□□□ 1.25
PCYT1A-202ENST00000411591 TMEM94Q12767 1356 aa22.88■■□□□ 1.25
PCYT1A-202ENST00000411591 PIK3C2BO00750 1634 aa22.86■■□□□ 1.25
PCYT1A-202ENST00000411591 MAP3K1Q13233 1512 aa22.85■■□□□ 1.25
PCYT1A-202ENST00000411591 MYOM3Q5VTT5 1437 aa22.84■■□□□ 1.25
PCYT1A-202ENST00000411591 ERBINQ96RT1 1412 aa22.83■■□□□ 1.25
PCYT1A-202ENST00000411591 KCNA6P17658 529 aa22.83■■□□□ 1.25
PCYT1A-202ENST00000411591 ROBO1Q9Y6N7 1651 aa22.82■■□□□ 1.24
PCYT1A-202ENST00000411591 KIF15Q9NS87 1388 aa22.82■■□□□ 1.24
PCYT1A-202ENST00000411591 TET3O43151 1660 aa22.81■■□□□ 1.24
PCYT1A-202ENST00000411591 EFCAB6Q5THR3 1501 aa22.8■■□□□ 1.24
PCYT1A-202ENST00000411591 KDM5AP29375 1690 aaKnown RBP22.8■■□□□ 1.24
PCYT1A-202ENST00000411591 VPS8Q8N3P4 1428 aa22.79■■□□□ 1.24
PCYT1A-202ENST00000411591 KANK4Q5T7N3 995 aaPredicted RBP22.78■■□□□ 1.24
PCYT1A-202ENST00000411591 IDI1Q13907 227 aa22.77■■□□□ 1.24
PCYT1A-202ENST00000411591 STAG3Q9UJ98 1225 aa22.77■■□□□ 1.24
PCYT1A-202ENST00000411591 NWD1Q149M9 1564 aa22.76■■□□□ 1.23
PCYT1A-202ENST00000411591 ABCC5O15440 1437 aa22.76■■□□□ 1.23
PCYT1A-202ENST00000411591 PROSER2Q86WR7 435 aaPredicted RBP22.76■■□□□ 1.23
PCYT1A-202ENST00000411591 NKTRP30414 1462 aaKnown RBP22.76■■□□□ 1.23
PCYT1A-202ENST00000411591 LMTK2Q8IWU2 1503 aa22.76■■□□□ 1.23
PCYT1A-202ENST00000411591 RBM33Q96EV2 1170 aaKnown RBP22.75■■□□□ 1.23
PCYT1A-202ENST00000411591 SLC26A8Q96RN1 970 aa22.75■■□□□ 1.23
PCYT1A-202ENST00000411591 RRP7BPQ9NSQ0 103 aa22.74■■□□□ 1.23
PCYT1A-202ENST00000411591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.73■■□□□ 1.235e-9■■■□□ 18.9
PCYT1A-202ENST00000411591 CROCC2H7BZ55 1655 aa22.73■■□□□ 1.23
PCYT1A-202ENST00000411591 KANK1Q14678 1352 aa22.72■■□□□ 1.23
PCYT1A-202ENST00000411591 NOS1P29475 1434 aa22.71■■□□□ 1.23
PCYT1A-202ENST00000411591 SETD1AO15047 1707 aaKnown RBP22.71■■□□□ 1.23
PCYT1A-202ENST00000411591 MSH6P52701 1360 aa22.7■■□□□ 1.22
PCYT1A-202ENST00000411591 JCADQ9P266 1359 aa22.7■■□□□ 1.22
PCYT1A-202ENST00000411591 ADGRB3O60242 1522 aa22.69■■□□□ 1.22
PCYT1A-202ENST00000411591 SLAIN2Q9P270 581 aa22.68■■□□□ 1.22
PCYT1A-202ENST00000411591 DAPK1P53355 1430 aa22.67■■□□□ 1.22
PCYT1A-202ENST00000411591 PHLPP1O60346 1717 aa22.67■■□□□ 1.22
PCYT1A-202ENST00000411591 PTPN23Q9H3S7 1636 aa22.64■■□□□ 1.22
PCYT1A-202ENST00000411591 COL16A1Q07092 1604 aaPredicted RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms