RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 CEBPAP49715 358 aaPredicted RBP36.31■■■■□ 3.4
UBE2E3-202ENST00000410062 CNTLNQ9NXG0 1405 aa36.3■■■■□ 3.4
UBE2E3-202ENST00000410062 CLTCQ00610 1675 aaKnown RBP36.29■■■■□ 3.4
UBE2E3-202ENST00000410062 PPP6R1Q9UPN7 881 aa36.27■■■■□ 3.4
UBE2E3-202ENST00000410062 RNF17Q9BXT8 1623 aaKnown RBP36.27■■■■□ 3.4
UBE2E3-202ENST00000410062 ROCK1Q13464 1354 aa36.26■■■■□ 3.4
UBE2E3-202ENST00000410062 C3P01024 1663 aa36.24■■■■□ 3.39
UBE2E3-202ENST00000410062 MROH2AA6NES4 1674 aa36.23■■■■□ 3.39
UBE2E3-202ENST00000410062 MROH1Q8NDA8 1641 aa36.22■■■■□ 3.39
UBE2E3-202ENST00000410062 ANKRD50Q9ULJ7 1429 aa36.21■■■■□ 3.39
UBE2E3-202ENST00000410062 ZMYM3Q14202 1370 aa36.2■■■■□ 3.39
UBE2E3-202ENST00000410062 WASHC2CQ9Y4E1 1318 aa36.2■■■■□ 3.39
UBE2E3-202ENST00000410062 KDM5DQ9BY66 1539 aa36.2■■■■□ 3.38
UBE2E3-202ENST00000410062 FAM135AQ9P2D6 1515 aa36.15■■■■□ 3.38
UBE2E3-202ENST00000410062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.15■■■■□ 3.38
UBE2E3-202ENST00000410062 DEPDC5O75140 1603 aa36.14■■■■□ 3.38
UBE2E3-202ENST00000410062 PRDM15P57071 1507 aaPredicted RBP36.13■■■■□ 3.37
UBE2E3-202ENST00000410062 ABCC3O15438 1527 aa36.11■■■■□ 3.37
UBE2E3-202ENST00000410062 CEP152O94986 1710 aa36.09■■■■□ 3.37
UBE2E3-202ENST00000410062 ZC3H13Q5T200 1668 aaKnown RBP36.08■■■■□ 3.37
UBE2E3-202ENST00000410062 KANK1Q14678 1352 aa36.04■■■■□ 3.36
UBE2E3-202ENST00000410062 NAIPQ13075 1403 aa36.01■■■■□ 3.36
UBE2E3-202ENST00000410062 SETD1BQ9UPS6 1966 aaKnown RBP36.01■■■■□ 3.35
UBE2E3-202ENST00000410062 NPATQ14207 1427 aa36.01■■■■□ 3.35
UBE2E3-202ENST00000410062 PZPP20742 1482 aa36■■■■□ 3.35
UBE2E3-202ENST00000410062 LMTK3Q96Q04 1460 aa36■■■■□ 3.35
UBE2E3-202ENST00000410062 CAMSAP1Q5T5Y3 1602 aa35.99■■■■□ 3.35
UBE2E3-202ENST00000410062 PREX1Q8TCU6 1659 aa35.99■■■■□ 3.35
UBE2E3-202ENST00000410062 VWDEQ8N2E2 1590 aa35.99■■■■□ 3.35
UBE2E3-202ENST00000410062 FBXO31Q5XUX0 539 aaPredicted RBP35.98■■■■□ 3.35
UBE2E3-202ENST00000410062 GCC2Q8IWJ2 1684 aa35.98■■■■□ 3.35
UBE2E3-202ENST00000410062 UNC13BO14795 1591 aa35.96■■■■□ 3.35
UBE2E3-202ENST00000410062 HFM1A2PYH4 1435 aa35.96■■■■□ 3.35
UBE2E3-202ENST00000410062 UHRF1BP1Q6BDS2 1440 aa35.93■■■■□ 3.34
UBE2E3-202ENST00000410062 LMTK2Q8IWU2 1503 aa35.92■■■■□ 3.34
UBE2E3-202ENST00000410062 CFAP65Q6ZU64 1925 aaKnown RBP35.88■■■■□ 3.33
UBE2E3-202ENST00000410062 HSPA2P54652 639 aa35.88■■■■□ 3.33
UBE2E3-202ENST00000410062 ARHGAP31Q2M1Z3 1444 aa35.87■■■■□ 3.33
UBE2E3-202ENST00000410062 NUP155O75694 1391 aa35.86■■■■□ 3.33
UBE2E3-202ENST00000410062 TNRQ92752 1358 aa35.86■■■■□ 3.33
UBE2E3-202ENST00000410062 MYO3AQ8NEV4 1616 aa35.86■■■■□ 3.33
UBE2E3-202ENST00000410062 ERVK-7P63135 1459 aa35.83■■■■□ 3.33
UBE2E3-202ENST00000410062 EFCAB6Q5THR3 1501 aa35.83■■■■□ 3.33
UBE2E3-202ENST00000410062 IQGAP3Q86VI3 1631 aa35.82■■■■□ 3.33
UBE2E3-202ENST00000410062 SPATA31D1Q6ZQQ2 1576 aa35.81■■■■□ 3.32
UBE2E3-202ENST00000410062 TET3O43151 1660 aa35.8■■■■□ 3.32
UBE2E3-202ENST00000410062 CEP170BQ9Y4F5 1589 aaPredicted RBP35.75■■■■□ 3.31
UBE2E3-202ENST00000410062 ZNF142P52746 1687 aaPredicted RBP35.75■■■■□ 3.31
UBE2E3-202ENST00000410062 TRIM52Q96A61 297 aa35.72■■■■□ 3.31
UBE2E3-202ENST00000410062 A2ML1A8K2U0 1454 aa35.71■■■■□ 3.31
UBE2E3-202ENST00000410062 E9PCH4 1651 aa35.7■■■■□ 3.3
UBE2E3-202ENST00000410062 RPRD2Q5VT52 1461 aaKnown RBP35.69■■■■□ 3.3
UBE2E3-202ENST00000410062 NLRP1Q9C000 1473 aa35.69■■■■□ 3.3
UBE2E3-202ENST00000410062 SETD5Q9C0A6 1442 aa35.69■■■■□ 3.3
UBE2E3-202ENST00000410062 NOS1P29475 1434 aa35.66■■■■□ 3.3
UBE2E3-202ENST00000410062 SYNMO15061 1565 aa35.64■■■■□ 3.3
UBE2E3-202ENST00000410062 UGGT1Q9NYU2 1555 aa35.6■■■■□ 3.29
UBE2E3-202ENST00000410062 RAB3GAP2Q9H2M9 1393 aa35.6■■■■□ 3.29
UBE2E3-202ENST00000410062 STRCQ7RTU9 1775 aa35.58■■■■□ 3.29
UBE2E3-202ENST00000410062 IDI1Q13907 227 aa35.55■■■■□ 3.28
UBE2E3-202ENST00000410062 SLC4A1APQ9BWU0 796 aaKnown RBP35.55■■■■□ 3.28
UBE2E3-202ENST00000410062 PIK3C2BO00750 1634 aa35.54■■■■□ 3.28
UBE2E3-202ENST00000410062 THEMISQ8N1K5 641 aaPredicted RBP35.53■■■■□ 3.28
UBE2E3-202ENST00000410062 UBR1Q8IWV7 1749 aa35.52■■■■□ 3.28
UBE2E3-202ENST00000410062 PKD2Q13563 968 aa35.51■■■■□ 3.28
UBE2E3-202ENST00000410062 PLA2R1Q13018 1463 aa35.51■■■■□ 3.27
UBE2E3-202ENST00000410062 SLC52A1Q9NWF4 448 aa35.51■■■■□ 3.27
UBE2E3-202ENST00000410062 NCKAP5LQ9HCH0 1330 aa35.49■■■■□ 3.27
UBE2E3-202ENST00000410062 SPHKAPQ2M3C7 1700 aa35.47■■■■□ 3.27
UBE2E3-202ENST00000410062 STAG3Q9UJ98 1225 aa35.47■■■■□ 3.27
UBE2E3-202ENST00000410062 MPHOSPH9Q99550 1183 aa35.46■■■■□ 3.27
UBE2E3-202ENST00000410062 ACIN1Q9UKV3 1341 aaKnown RBP35.45■■■■□ 3.27
UBE2E3-202ENST00000410062 PTPRTO14522 1441 aa35.44■■■■□ 3.26
UBE2E3-202ENST00000410062 FOXD1Q16676 465 aa35.42■■■■□ 3.26
UBE2E3-202ENST00000410062 ADGRB3O60242 1522 aa35.4■■■■□ 3.26
UBE2E3-202ENST00000410062 KDM5AP29375 1690 aaKnown RBP35.4■■■■□ 3.26
UBE2E3-202ENST00000410062 TRIM26Q12899 539 aaPredicted RBP35.39■■■■□ 3.26
UBE2E3-202ENST00000410062 DMRT2Q9Y5R5 561 aa35.39■■■■□ 3.26
UBE2E3-202ENST00000410062 ANKLE2Q86XL3 938 aa35.38■■■■□ 3.25
UBE2E3-202ENST00000410062 POLR1AO95602 1720 aaPredicted RBP35.37■■■■□ 3.25
UBE2E3-202ENST00000410062 HRCP23327 699 aa35.37■■■■□ 3.25
UBE2E3-202ENST00000410062 CHGAP10645 457 aaKnown RBP35.36■■■■□ 3.25
UBE2E3-202ENST00000410062 TRPM2O94759 1503 aa35.36■■■■□ 3.25
UBE2E3-202ENST00000410062 MYO5BQ9ULV0 1848 aa35.34■■■■□ 3.25
UBE2E3-202ENST00000410062 TMEM131LA2VDJ0 1609 aa35.34■■■■□ 3.25
UBE2E3-202ENST00000410062 SLIT1O75093 1534 aa35.34■■■■□ 3.25
UBE2E3-202ENST00000410062 ARHGAP23Q9P227 1491 aa35.33■■■■□ 3.25
UBE2E3-202ENST00000410062 NEURL4Q96JN8 1562 aa35.33■■■■□ 3.25
UBE2E3-202ENST00000410062 TMEM2Q9UHN6 1383 aa35.33■■■■□ 3.25
UBE2E3-202ENST00000410062 CLTCL1P53675 1640 aa35.32■■■■□ 3.24
UBE2E3-202ENST00000410062 LTKP29376 864 aa35.29■■■■□ 3.24
UBE2E3-202ENST00000410062 TXNDC2Q86VQ3 553 aa35.28■■■■□ 3.24
UBE2E3-202ENST00000410062 SCAF11Q99590 1463 aaKnown RBP35.27■■■■□ 3.24
UBE2E3-202ENST00000410062 EID1Q9Y6B2 187 aa35.25■■■■□ 3.23
UBE2E3-202ENST00000410062 MED14O60244 1454 aa35.23■■■■□ 3.23
UBE2E3-202ENST00000410062 NPHP4O75161 1426 aaPredicted RBP35.23■■■■□ 3.23
UBE2E3-202ENST00000410062 IQGAP1P46940 1657 aa35.19■■■■□ 3.22
UBE2E3-202ENST00000410062 ZFYVE9O95405 1425 aa35.19■■■■□ 3.22
UBE2E3-202ENST00000410062 RIMS2Q9UQ26 1411 aa35.19■■■■□ 3.22
UBE2E3-202ENST00000410062 KIF1BO60333 1816 aa35.18■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms