RNA–Protein interactions for RNA: ENST00000409894.7

POLR1B-203, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best) BASIC

Gene POLR1B, Length 4,457 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-203ENST00000409894 COG6Q9Y2V7 657 aa11.31□□□□□ -0.6
POLR1B-203ENST00000409894 RTF1Q92541 710 aaKnown RBP11.3□□□□□ -0.6
POLR1B-203ENST00000409894 CREBRFQ8IUR6 639 aa11.3□□□□□ -0.6
POLR1B-203ENST00000409894 BECN2A8MW95 431 aa11.3□□□□□ -0.6
POLR1B-203ENST00000409894 GOLGA6L19H0YKK7 550 aa11.29□□□□□ -0.6
POLR1B-203ENST00000409894 TPM3P06753 285 aa11.29□□□□□ -0.6
POLR1B-203ENST00000409894 FHAD1B1AJZ9 1412 aa11.29□□□□□ -0.6
POLR1B-203ENST00000409894 KIF16BQ96L93 1317 aa11.29□□□□□ -0.6
POLR1B-203ENST00000409894 ROCK2O75116 1388 aaKnown RBP11.29□□□□□ -0.6
POLR1B-203ENST00000409894 FRAT2O75474 233 aaPredicted RBP11.29□□□□□ -0.6
POLR1B-203ENST00000409894 HMMRO75330 724 aa11.29□□□□□ -0.6
POLR1B-203ENST00000409894 MRE11P49959 708 aa11.29□□□□□ -0.6
POLR1B-203ENST00000409894 PDS5BQ9NTI5 1447 aa11.29□□□□□ -0.6
POLR1B-203ENST00000409894 RRP7AQ9Y3A4 280 aaKnown RBP11.28□□□□□ -0.6
POLR1B-203ENST00000409894 SF3A1Q15459 793 aaKnown RBP11.28□□□□□ -0.6
POLR1B-203ENST00000409894 ANKRD45Q5TZF3 282 aa11.28□□□□□ -0.6
POLR1B-203ENST00000409894 SLC4A10Q6U841 1118 aa11.28□□□□□ -0.6
POLR1B-203ENST00000409894 PODXL2Q9NZ53 605 aa11.28□□□□□ -0.6
POLR1B-203ENST00000409894 CLSTN1O94985 981 aa11.28□□□□□ -0.6
POLR1B-203ENST00000409894 SETQ01105 290 aaPredicted RBP11.28□□□□□ -0.6
POLR1B-203ENST00000409894 NCBP3Q53F19 620 aaKnown RBP11.27□□□□□ -0.6
POLR1B-203ENST00000409894 DHX57Q6P158 1386 aaKnown RBP11.27□□□□□ -0.6
POLR1B-203ENST00000409894 MAP7D2Q96T17 732 aa11.27□□□□□ -0.61
POLR1B-203ENST00000409894 PDE4CQ08493 712 aa11.27□□□□□ -0.61
POLR1B-203ENST00000409894 CGNL1Q0VF96 1302 aa11.27□□□□□ -0.61
POLR1B-203ENST00000409894 CCDC34Q96HJ3 373 aa11.27□□□□□ -0.61
POLR1B-203ENST00000409894 RBM10P98175 930 aaKnown RBP11.26□□□□□ -0.61
POLR1B-203ENST00000409894 GPS2Q13227 327 aa11.26□□□□□ -0.61
POLR1B-203ENST00000409894 BCL11BQ9C0K0 894 aaPredicted RBP11.26□□□□□ -0.61
POLR1B-203ENST00000409894 CHMP3Q9Y3E7 222 aa11.26□□□□□ -0.61
POLR1B-203ENST00000409894 MYBBP1AQ9BQG0 1328 aaKnown RBP11.26□□□□□ -0.61
POLR1B-203ENST00000409894 NASPP49321 788 aaPredicted RBP11.25□□□□□ -0.61
POLR1B-203ENST00000409894 ATP6V1DQ9Y5K8 247 aa11.25□□□□□ -0.61
POLR1B-203ENST00000409894 TEX35Q5T0J7 233 aa11.25□□□□□ -0.61
POLR1B-203ENST00000409894 ELL2O00472 640 aaPredicted RBP11.24□□□□□ -0.61
POLR1B-203ENST00000409894 STK31Q9BXU1 1019 aa11.24□□□□□ -0.61
POLR1B-203ENST00000409894 ISY1Q9ULR0 285 aaKnown RBP11.24□□□□□ -0.61
POLR1B-203ENST00000409894 MTERF4Q7Z6M4 381 aaKnown RBP11.24□□□□□ -0.61
POLR1B-203ENST00000409894 RNF214Q8ND24 703 aa11.24□□□□□ -0.61
POLR1B-203ENST00000409894 STK26Q9P289 416 aa11.24□□□□□ -0.61
POLR1B-203ENST00000409894 ST20-MTHFSA0A0A6YYL1 179 aa11.24□□□□□ -0.61
POLR1B-203ENST00000409894 RILPL2Q969X0 211 aa11.23□□□□□ -0.61
POLR1B-203ENST00000409894 TRAK2O60296 914 aa11.23□□□□□ -0.61
POLR1B-203ENST00000409894 HOMER1Q86YM7 354 aa11.23□□□□□ -0.61
POLR1B-203ENST00000409894 ARHGAP35Q9NRY4 1499 aa11.23□□□□□ -0.61
POLR1B-203ENST00000409894 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
POLR1B-203ENST00000409894 PHLDB1Q86UU1 1377 aa11.23□□□□□ -0.61
POLR1B-203ENST00000409894 PATL2C9JE40 543 aaKnown RBP11.22□□□□□ -0.61
POLR1B-203ENST00000409894 PES1O00541 588 aaKnown RBP11.22□□□□□ -0.61
POLR1B-203ENST00000409894 MCTP1Q6DN14 999 aa11.22□□□□□ -0.61
POLR1B-203ENST00000409894 IFT57Q9NWB7 429 aa11.22□□□□□ -0.61
POLR1B-203ENST00000409894 KIF15Q9NS87 1388 aa11.22□□□□□ -0.61
POLR1B-203ENST00000409894 NPHP1O15259 732 aa11.22□□□□□ -0.61
POLR1B-203ENST00000409894 TPM2P07951 284 aa11.22□□□□□ -0.61
POLR1B-203ENST00000409894 ZKSCAN2Q63HK3 967 aa11.22□□□□□ -0.61
POLR1B-203ENST00000409894 APAF1O14727 1248 aa11.21□□□□□ -0.61
POLR1B-203ENST00000409894 RASSF8Q8NHQ8 419 aa11.21□□□□□ -0.61
POLR1B-203ENST00000409894 NUP155O75694 1391 aa11.21□□□□□ -0.61
POLR1B-203ENST00000409894 H3BQV1 296 aa11.21□□□□□ -0.62
POLR1B-203ENST00000409894 IFFO2Q5TF58 517 aa11.21□□□□□ -0.62
POLR1B-203ENST00000409894 HDGFL2Q7Z4V5 671 aaPredicted RBP11.21□□□□□ -0.62
POLR1B-203ENST00000409894 C22orf23Q9BZE7 217 aa11.21□□□□□ -0.62
POLR1B-203ENST00000409894 KIF3AQ9Y496 699 aa11.21□□□□□ -0.62
POLR1B-203ENST00000409894 DIAPH3Q9NSV4 1193 aa11.21□□□□□ -0.62
POLR1B-203ENST00000409894 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.2□□□□□ -0.62
POLR1B-203ENST00000409894 FMN1Q68DA7 1419 aa11.2□□□□□ -0.62
POLR1B-203ENST00000409894 E9PSI1 815 aa11.2□□□□□ -0.62
POLR1B-203ENST00000409894 PANK3Q9H999 370 aa11.2□□□□□ -0.62
POLR1B-203ENST00000409894 GPATCH3Q96I76 525 aa11.2□□□□□ -0.62
POLR1B-203ENST00000409894 NUCB2P80303 420 aa11.19□□□□□ -0.62
POLR1B-203ENST00000409894 FAM184AQ8NB25 1140 aa11.19□□□□□ -0.62
POLR1B-203ENST00000409894 MLECQ14165 292 aa11.19□□□□□ -0.62
POLR1B-203ENST00000409894 GORABQ5T7V8 394 aa11.18□□□□□ -0.62
POLR1B-203ENST00000409894 REC8O95072 547 aa11.18□□□□□ -0.62
POLR1B-203ENST00000409894 BAZ1AQ9NRL2 1556 aaPredicted RBP11.18□□□□□ -0.62
POLR1B-203ENST00000409894 CARMIL1Q5VZK9 1371 aa11.18□□□□□ -0.62
POLR1B-203ENST00000409894 BICD2Q8TD16 824 aa11.17□□□□□ -0.62
POLR1B-203ENST00000409894 LNPKQ9C0E8 428 aa11.17□□□□□ -0.62
POLR1B-203ENST00000409894 CCDC66A2RUB6 948 aa11.17□□□□□ -0.62
POLR1B-203ENST00000409894 TSR1Q2NL82 804 aaKnown RBP11.17□□□□□ -0.62
POLR1B-203ENST00000409894 CAVIN1Q6NZI2 390 aaKnown RBP11.17□□□□□ -0.62
POLR1B-203ENST00000409894 MNS1Q8NEH6 495 aa11.17□□□□□ -0.62
POLR1B-203ENST00000409894 TDRD9Q8NDG6 1382 aaKnown RBP11.16□□□□□ -0.62
POLR1B-203ENST00000409894 RRP9O43818 475 aaKnown RBP11.16□□□□□ -0.62
POLR1B-203ENST00000409894 TPD52L1Q16890 204 aaPredicted RBP11.16□□□□□ -0.62
POLR1B-203ENST00000409894 ARGLU1Q9NWB6 273 aaPredicted RBP11.16□□□□□ -0.62
POLR1B-203ENST00000409894 SPAG9O60271 1321 aaKnown RBP11.16□□□□□ -0.62
POLR1B-203ENST00000409894 CCDC39Q9UFE4 941 aa11.16□□□□□ -0.62
POLR1B-203ENST00000409894 ZNF330Q9Y3S2 320 aaPredicted RBP11.16□□□□□ -0.62
POLR1B-203ENST00000409894 VPS37CA5D8V6 355 aaPredicted RBP11.16□□□□□ -0.62
POLR1B-203ENST00000409894 APPP05067 770 aa11.15□□□□□ -0.62
POLR1B-203ENST00000409894 ANO2Q9NQ90 1003 aa11.15□□□□□ -0.62
POLR1B-203ENST00000409894 ESPNB1AK53 854 aa11.15□□□□□ -0.63
POLR1B-203ENST00000409894 TPM1P09493 284 aa11.15□□□□□ -0.63
POLR1B-203ENST00000409894 TOMM22Q9NS69 142 aa11.15□□□□□ -0.63
POLR1B-203ENST00000409894 MSH5O43196 834 aa11.14□□□□□ -0.63
POLR1B-203ENST00000409894 MPNDQ8N594 471 aa11.14□□□□□ -0.63
POLR1B-203ENST00000409894 DDX19BQ9UMR2 479 aa11.14□□□□□ -0.63
POLR1B-203ENST00000409894 SMARCA2P51531 1590 aa11.14□□□□□ -0.63
POLR1B-203ENST00000409894 HMGN5P82970 282 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms