RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 PCGF6Q9BYE7 350 aa30.78■■■□□ 2.52
C4orf48-202ENST00000409860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.77■■■□□ 2.52
C4orf48-202ENST00000409860 KANK1Q14678 1352 aa30.77■■■□□ 2.52
C4orf48-202ENST00000409860 RAB3GAP2Q9H2M9 1393 aa30.77■■■□□ 2.52
C4orf48-202ENST00000409860 ESF1Q9H501 851 aaKnown RBP30.76■■■□□ 2.51
C4orf48-202ENST00000409860 PRDM15P57071 1507 aaPredicted RBP30.75■■■□□ 2.51
C4orf48-202ENST00000409860 DEPDC5O75140 1603 aa30.75■■■□□ 2.51
C4orf48-202ENST00000409860 ACIN1Q9UKV3 1341 aaKnown RBP30.73■■■□□ 2.51
C4orf48-202ENST00000409860 MROH1Q8NDA8 1641 aa30.73■■■□□ 2.51
C4orf48-202ENST00000409860 UNC13BO14795 1591 aa30.73■■■□□ 2.51
C4orf48-202ENST00000409860 FAM135AQ9P2D6 1515 aa30.73■■■□□ 2.51
C4orf48-202ENST00000409860 WASHC2CQ9Y4E1 1318 aa30.71■■■□□ 2.51
C4orf48-202ENST00000409860 NUP155O75694 1391 aa30.7■■■□□ 2.51
C4orf48-202ENST00000409860 KDM5DQ9BY66 1539 aa30.69■■■□□ 2.5
C4orf48-202ENST00000409860 ADAMTSL3P82987 1691 aa30.69■■■□□ 2.5
C4orf48-202ENST00000409860 HRCP23327 699 aa30.69■■■□□ 2.5
C4orf48-202ENST00000409860 TRIM52Q96A61 297 aa30.69■■■□□ 2.5
C4orf48-202ENST00000409860 CNTLNQ9NXG0 1405 aa30.69■■■□□ 2.5
C4orf48-202ENST00000409860 MADDQ8WXG6 1647 aa30.65■■■□□ 2.5
C4orf48-202ENST00000409860 ABCC3O15438 1527 aa30.65■■■□□ 2.5
C4orf48-202ENST00000409860 VWDEQ8N2E2 1590 aa30.65■■■□□ 2.5
C4orf48-202ENST00000409860 FER1L4A9Z1Z3 1794 aa30.64■■■□□ 2.49
C4orf48-202ENST00000409860 ZC3H13Q5T200 1668 aaKnown RBP30.62■■■□□ 2.49
C4orf48-202ENST00000409860 LMTK2Q8IWU2 1503 aa30.61■■■□□ 2.49
C4orf48-202ENST00000409860 KDM4FA0A1W2PPD8 638 aa30.6■■■□□ 2.49
C4orf48-202ENST00000409860 IQGAP3Q86VI3 1631 aa30.6■■■□□ 2.49
C4orf48-202ENST00000409860 CLTCQ00610 1675 aaKnown RBP30.58■■■□□ 2.49
C4orf48-202ENST00000409860 RIMS1Q86UR5 1692 aaKnown RBP30.57■■■□□ 2.48
C4orf48-202ENST00000409860 CEP152O94986 1710 aa30.56■■■□□ 2.48
C4orf48-202ENST00000409860 ZMYM3Q14202 1370 aa30.55■■■□□ 2.48
C4orf48-202ENST00000409860 MROH2AA6NES4 1674 aa30.53■■■□□ 2.48
C4orf48-202ENST00000409860 PZPP20742 1482 aa30.53■■■□□ 2.48
C4orf48-202ENST00000409860 SLC4A1APQ9BWU0 796 aaKnown RBP30.53■■■□□ 2.48
C4orf48-202ENST00000409860 CAMSAP1Q5T5Y3 1602 aa30.52■■■□□ 2.48
C4orf48-202ENST00000409860 TET3O43151 1660 aa30.52■■■□□ 2.48
C4orf48-202ENST00000409860 PTPRMP28827 1452 aa30.51■■■□□ 2.48
C4orf48-202ENST00000409860 ARHGAP31Q2M1Z3 1444 aa30.51■■■□□ 2.47
C4orf48-202ENST00000409860 EFCAB6Q5THR3 1501 aa30.51■■■□□ 2.47
C4orf48-202ENST00000409860 MPHOSPH9Q99550 1183 aa30.49■■■□□ 2.47
C4orf48-202ENST00000409860 PLPPR3Q6T4P5 718 aa30.47■■■□□ 2.47
C4orf48-202ENST00000409860 NPATQ14207 1427 aa30.47■■■□□ 2.47
C4orf48-202ENST00000409860 CEBPAP49715 358 aaPredicted RBP30.46■■■□□ 2.47
C4orf48-202ENST00000409860 RPRD2Q5VT52 1461 aaKnown RBP30.45■■■□□ 2.47
C4orf48-202ENST00000409860 PKD2Q13563 968 aa30.44■■■□□ 2.46
C4orf48-202ENST00000409860 C3P01024 1663 aa30.42■■■□□ 2.46
C4orf48-202ENST00000409860 ERVK-7P63135 1459 aa30.38■■■□□ 2.45
C4orf48-202ENST00000409860 FBXO31Q5XUX0 539 aaPredicted RBP30.38■■■□□ 2.45
C4orf48-202ENST00000409860 E9PCH4 1651 aa30.38■■■□□ 2.45
C4orf48-202ENST00000409860 SPATA31D1Q6ZQQ2 1576 aa30.34■■■□□ 2.45
C4orf48-202ENST00000409860 NOS1P29475 1434 aa30.33■■■□□ 2.45
C4orf48-202ENST00000409860 TNRQ92752 1358 aa30.33■■■□□ 2.45
C4orf48-202ENST00000409860 FOXD1Q16676 465 aa30.32■■■□□ 2.44
C4orf48-202ENST00000409860 PREX1Q8TCU6 1659 aa30.31■■■□□ 2.44
C4orf48-202ENST00000409860 DHX57Q6P158 1386 aaKnown RBP30.29■■■□□ 2.44
C4orf48-202ENST00000409860 PTPRTO14522 1441 aa30.29■■■□□ 2.44
C4orf48-202ENST00000409860 TRPM2O94759 1503 aa30.23■■■□□ 2.43
C4orf48-202ENST00000409860 SPHKAPQ2M3C7 1700 aa30.23■■■□□ 2.43
C4orf48-202ENST00000409860 SLC52A1Q9NWF4 448 aa30.23■■■□□ 2.43
C4orf48-202ENST00000409860 CFAP65Q6ZU64 1925 aaKnown RBP30.23■■■□□ 2.43
C4orf48-202ENST00000409860 SYNMO15061 1565 aa30.23■■■□□ 2.43
C4orf48-202ENST00000409860 PLA2R1Q13018 1463 aa30.22■■■□□ 2.43
C4orf48-202ENST00000409860 NLRP1Q9C000 1473 aa30.21■■■□□ 2.43
C4orf48-202ENST00000409860 ANKRD30BQ9BXX2 1392 aa30.19■■■□□ 2.42
C4orf48-202ENST00000409860 UHRF1BP1Q6BDS2 1440 aa30.19■■■□□ 2.42
C4orf48-202ENST00000409860 SETD1BQ9UPS6 1966 aaKnown RBP30.17■■■□□ 2.42
C4orf48-202ENST00000409860 CCDC144AA2RUR9 1427 aa30.17■■■□□ 2.42
C4orf48-202ENST00000409860 MYO3AQ8NEV4 1616 aa30.17■■■□□ 2.42
C4orf48-202ENST00000409860 IDI1Q13907 227 aa30.16■■■□□ 2.42
C4orf48-202ENST00000409860 AEBP2Q6ZN18 517 aaPredicted RBP30.16■■■□□ 2.42
C4orf48-202ENST00000409860 UGGT1Q9NYU2 1555 aa30.15■■■□□ 2.42
C4orf48-202ENST00000409860 A2ML1A8K2U0 1454 aa30.13■■■□□ 2.41
C4orf48-202ENST00000409860 PIK3C2BO00750 1634 aa30.12■■■□□ 2.41
C4orf48-202ENST00000409860 STAG3Q9UJ98 1225 aa30.11■■■□□ 2.41
C4orf48-202ENST00000409860 CEP170BQ9Y4F5 1589 aaPredicted RBP30.11■■■□□ 2.41
C4orf48-202ENST00000409860 CLTCL1P53675 1640 aa30.11■■■□□ 2.41
C4orf48-202ENST00000409860 CHGAP10645 457 aaKnown RBP30.07■■■□□ 2.4
C4orf48-202ENST00000409860 CCER1Q8TC90 406 aaPredicted RBP30.07■■■□□ 2.4
C4orf48-202ENST00000409860 ZNF142P52746 1687 aaPredicted RBP30.07■■■□□ 2.4
C4orf48-202ENST00000409860 ADGRB3O60242 1522 aa30.06■■■□□ 2.4
C4orf48-202ENST00000409860 LMTK3Q96Q04 1460 aa30.03■■■□□ 2.4
C4orf48-202ENST00000409860 CLSPNQ9HAW4 1339 aa30.02■■■□□ 2.4
C4orf48-202ENST00000409860 THEMISQ8N1K5 641 aaPredicted RBP30.02■■■□□ 2.4
C4orf48-202ENST00000409860 KDM5AP29375 1690 aaKnown RBP29.99■■■□□ 2.39
C4orf48-202ENST00000409860 TMEM131LA2VDJ0 1609 aa29.98■■■□□ 2.39
C4orf48-202ENST00000409860 UBR1Q8IWV7 1749 aa29.98■■■□□ 2.39
C4orf48-202ENST00000409860 SIN3AQ96ST3 1273 aa29.96■■■□□ 2.39
C4orf48-202ENST00000409860 KIF1BO60333 1816 aa29.96■■■□□ 2.39
C4orf48-202ENST00000409860 ZNF326Q5BKZ1 582 aaKnown RBP29.95■■■□□ 2.39
C4orf48-202ENST00000409860 SPATA31E1Q6ZUB1 1445 aa29.95■■■□□ 2.38
C4orf48-202ENST00000409860 NEUROD1Q13562 356 aa29.94■■■□□ 2.38
C4orf48-202ENST00000409860 NEURL4Q96JN8 1562 aa29.93■■■□□ 2.38
C4orf48-202ENST00000409860 TMEM2Q9UHN6 1383 aa29.92■■■□□ 2.38
C4orf48-202ENST00000409860 HSPA2P54652 639 aa29.92■■■□□ 2.38
C4orf48-202ENST00000409860 RGL3Q3MIN7 710 aa29.91■■■□□ 2.38
C4orf48-202ENST00000409860 SLIT1O75093 1534 aa29.89■■■□□ 2.38
C4orf48-202ENST00000409860 RPGRIP1LQ68CZ1 1315 aa29.89■■■□□ 2.38
C4orf48-202ENST00000409860 ARHGAP23Q9P227 1491 aa29.88■■■□□ 2.37
C4orf48-202ENST00000409860 HDGFP51858 240 aaKnown RBP29.88■■■□□ 2.37
C4orf48-202ENST00000409860 RIMS2Q9UQ26 1411 aa29.88■■■□□ 2.37
C4orf48-202ENST00000409860 EID1Q9Y6B2 187 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms