RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 NAIPQ13075 1403 aa24.84■■□□□ 1.57
GCFC2-202ENST00000409857 ANKRD50Q9ULJ7 1429 aa24.83■■□□□ 1.57
GCFC2-202ENST00000409857 GTF3C3Q9Y5Q9 886 aa24.82■■□□□ 1.56
GCFC2-202ENST00000409857 RNF17Q9BXT8 1623 aaKnown RBP24.82■■□□□ 1.56
GCFC2-202ENST00000409857 DEPDC5O75140 1603 aa24.8■■□□□ 1.56
GCFC2-202ENST00000409857 CENPBP07199 599 aaPredicted RBP24.78■■□□□ 1.56
GCFC2-202ENST00000409857 ARID4BQ4LE39 1312 aaPredicted RBP24.75■■□□□ 1.55
GCFC2-202ENST00000409857 UNC13BO14795 1591 aa24.75■■□□□ 1.55
GCFC2-202ENST00000409857 FAM135AQ9P2D6 1515 aa24.74■■□□□ 1.55
GCFC2-202ENST00000409857 ZNF316A6NFI3 1004 aaPredicted RBP24.74■■□□□ 1.55
GCFC2-202ENST00000409857 MROH1Q8NDA8 1641 aa24.74■■□□□ 1.55
GCFC2-202ENST00000409857 KIF3BO15066 747 aa24.74■■□□□ 1.55
GCFC2-202ENST00000409857 SETD5Q9C0A6 1442 aa24.74■■□□□ 1.55
GCFC2-202ENST00000409857 PRDM15P57071 1507 aaPredicted RBP24.74■■□□□ 1.55
GCFC2-202ENST00000409857 ADAMTSL3P82987 1691 aa24.72■■□□□ 1.55
GCFC2-202ENST00000409857 PPP6R1Q9UPN7 881 aa24.71■■□□□ 1.55
GCFC2-202ENST00000409857 ZC3H13Q5T200 1668 aaKnown RBP24.7■■□□□ 1.54
GCFC2-202ENST00000409857 FER1L4A9Z1Z3 1794 aa24.69■■□□□ 1.54
GCFC2-202ENST00000409857 KDM5DQ9BY66 1539 aa24.68■■□□□ 1.54
GCFC2-202ENST00000409857 VWDEQ8N2E2 1590 aa24.68■■□□□ 1.54
GCFC2-202ENST00000409857 GGT6Q6P531 493 aa24.65■■□□□ 1.54
GCFC2-202ENST00000409857 IQGAP3Q86VI3 1631 aa24.64■■□□□ 1.53
GCFC2-202ENST00000409857 MROH2AA6NES4 1674 aa24.64■■□□□ 1.53
GCFC2-202ENST00000409857 MADDQ8WXG6 1647 aa24.64■■□□□ 1.53
GCFC2-202ENST00000409857 RAB3GAP2Q9H2M9 1393 aa24.63■■□□□ 1.53
GCFC2-202ENST00000409857 KANK1Q14678 1352 aa24.62■■□□□ 1.53
GCFC2-202ENST00000409857 CNTLNQ9NXG0 1405 aa24.62■■□□□ 1.53
GCFC2-202ENST00000409857 MLECQ14165 292 aa24.62■■□□□ 1.53
GCFC2-202ENST00000409857 CLTCQ00610 1675 aaKnown RBP24.62■■□□□ 1.53
GCFC2-202ENST00000409857 CEP152O94986 1710 aa24.62■■□□□ 1.53
GCFC2-202ENST00000409857 LMTK2Q8IWU2 1503 aa24.62■■□□□ 1.53
GCFC2-202ENST00000409857 ABCC3O15438 1527 aa24.61■■□□□ 1.53
GCFC2-202ENST00000409857 YTHDC1Q96MU7 727 aaKnown RBP24.59■■□□□ 1.53
GCFC2-202ENST00000409857 RIMS1Q86UR5 1692 aaKnown RBP24.58■■□□□ 1.53
GCFC2-202ENST00000409857 CAMSAP1Q5T5Y3 1602 aa24.57■■□□□ 1.52
GCFC2-202ENST00000409857 TET3O43151 1660 aa24.57■■□□□ 1.52
GCFC2-202ENST00000409857 NUP155O75694 1391 aa24.56■■□□□ 1.52
GCFC2-202ENST00000409857 WASHC2CQ9Y4E1 1318 aa24.56■■□□□ 1.52
GCFC2-202ENST00000409857 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.56■■□□□ 1.526e-7■■□□□ 13.5
GCFC2-202ENST00000409857 ESF1Q9H501 851 aaKnown RBP24.55■■□□□ 1.52
GCFC2-202ENST00000409857 MYT1Q01538 1121 aa24.54■■□□□ 1.52
GCFC2-202ENST00000409857 EFCAB6Q5THR3 1501 aa24.52■■□□□ 1.52
GCFC2-202ENST00000409857 C3P01024 1663 aa24.52■■□□□ 1.52
GCFC2-202ENST00000409857 KDM4FA0A1W2PPD8 638 aa24.51■■□□□ 1.51
GCFC2-202ENST00000409857 MIER1Q8N108 512 aa24.51■■□□□ 1.51
GCFC2-202ENST00000409857 ARHGAP31Q2M1Z3 1444 aa24.51■■□□□ 1.51
GCFC2-202ENST00000409857 PZPP20742 1482 aa24.51■■□□□ 1.51
GCFC2-202ENST00000409857 TRIM52Q96A61 297 aa24.5■■□□□ 1.51
GCFC2-202ENST00000409857 ZMYM3Q14202 1370 aa24.48■■□□□ 1.51
GCFC2-202ENST00000409857 PTPRMP28827 1452 aa24.47■■□□□ 1.51
GCFC2-202ENST00000409857 RPRD2Q5VT52 1461 aaKnown RBP24.47■■□□□ 1.51
GCFC2-202ENST00000409857 E9PCH4 1651 aa24.47■■□□□ 1.51
GCFC2-202ENST00000409857 NPATQ14207 1427 aa24.43■■□□□ 1.5
GCFC2-202ENST00000409857 PREX1Q8TCU6 1659 aa24.42■■□□□ 1.5
GCFC2-202ENST00000409857 MPHOSPH9Q99550 1183 aa24.4■■□□□ 1.5
GCFC2-202ENST00000409857 SLC4A1APQ9BWU0 796 aaKnown RBP24.4■■□□□ 1.5
GCFC2-202ENST00000409857 SPATA31D1Q6ZQQ2 1576 aa24.4■■□□□ 1.5
GCFC2-202ENST00000409857 CFAP65Q6ZU64 1925 aaKnown RBP24.38■■□□□ 1.49
GCFC2-202ENST00000409857 ERVK-7P63135 1459 aa24.37■■□□□ 1.49
GCFC2-202ENST00000409857 SPHKAPQ2M3C7 1700 aa24.37■■□□□ 1.49
GCFC2-202ENST00000409857 SETD1BQ9UPS6 1966 aaKnown RBP24.35■■□□□ 1.49
GCFC2-202ENST00000409857 NOS1P29475 1434 aa24.35■■□□□ 1.49
GCFC2-202ENST00000409857 PKD2Q13563 968 aa24.34■■□□□ 1.49
GCFC2-202ENST00000409857 CEBPAP49715 358 aaPredicted RBP24.33■■□□□ 1.49
GCFC2-202ENST00000409857 PTPRTO14522 1441 aa24.32■■□□□ 1.48
GCFC2-202ENST00000409857 SYNMO15061 1565 aa24.31■■□□□ 1.48
GCFC2-202ENST00000409857 TRPM2O94759 1503 aa24.3■■□□□ 1.48
GCFC2-202ENST00000409857 FBXO31Q5XUX0 539 aaPredicted RBP24.3■■□□□ 1.48
GCFC2-202ENST00000409857 PIK3C2BO00750 1634 aa24.28■■□□□ 1.48
GCFC2-202ENST00000409857 TNRQ92752 1358 aa24.28■■□□□ 1.48
GCFC2-202ENST00000409857 MYO3AQ8NEV4 1616 aa24.28■■□□□ 1.48
GCFC2-202ENST00000409857 DHX57Q6P158 1386 aaKnown RBP24.28■■□□□ 1.48
GCFC2-202ENST00000409857 PLA2R1Q13018 1463 aa24.26■■□□□ 1.47
GCFC2-202ENST00000409857 NLRP1Q9C000 1473 aa24.25■■□□□ 1.47
GCFC2-202ENST00000409857 ZNF142P52746 1687 aaPredicted RBP24.25■■□□□ 1.47
GCFC2-202ENST00000409857 KDM5AP29375 1690 aaKnown RBP24.23■■□□□ 1.47
GCFC2-202ENST00000409857 PLPPR3Q6T4P5 718 aa24.23■■□□□ 1.47
GCFC2-202ENST00000409857 FOXD1Q16676 465 aa24.22■■□□□ 1.47
GCFC2-202ENST00000409857 SLC52A1Q9NWF4 448 aa24.21■■□□□ 1.47
GCFC2-202ENST00000409857 ANKRD30BQ9BXX2 1392 aa24.21■■□□□ 1.47
GCFC2-202ENST00000409857 CLTCL1P53675 1640 aa24.2■■□□□ 1.47
GCFC2-202ENST00000409857 CEP170BQ9Y4F5 1589 aaPredicted RBP24.19■■□□□ 1.46
GCFC2-202ENST00000409857 A2ML1A8K2U0 1454 aa24.18■■□□□ 1.46
GCFC2-202ENST00000409857 UHRF1BP1Q6BDS2 1440 aa24.18■■□□□ 1.46
GCFC2-202ENST00000409857 KIF1BO60333 1816 aa24.18■■□□□ 1.46
GCFC2-202ENST00000409857 UGGT1Q9NYU2 1555 aa24.17■■□□□ 1.46
GCFC2-202ENST00000409857 UBR1Q8IWV7 1749 aa24.16■■□□□ 1.46
GCFC2-202ENST00000409857 CCDC144AA2RUR9 1427 aa24.16■■□□□ 1.46
GCFC2-202ENST00000409857 ADGRB3O60242 1522 aa24.15■■□□□ 1.46
GCFC2-202ENST00000409857 IDI1Q13907 227 aa24.14■■□□□ 1.46
GCFC2-202ENST00000409857 TMEM131LA2VDJ0 1609 aa24.14■■□□□ 1.45
GCFC2-202ENST00000409857 NEURL4Q96JN8 1562 aa24.14■■□□□ 1.45
GCFC2-202ENST00000409857 MYO5BQ9ULV0 1848 aa24.11■■□□□ 1.45
GCFC2-202ENST00000409857 LMTK3Q96Q04 1460 aa24.1■■□□□ 1.45
GCFC2-202ENST00000409857 CLSPNQ9HAW4 1339 aa24.1■■□□□ 1.45
GCFC2-202ENST00000409857 AEBP2Q6ZN18 517 aaPredicted RBP24.05■■□□□ 1.44
GCFC2-202ENST00000409857 SPATA31E1Q6ZUB1 1445 aa24.04■■□□□ 1.44
GCFC2-202ENST00000409857 THEMISQ8N1K5 641 aaPredicted RBP24.03■■□□□ 1.44
GCFC2-202ENST00000409857 SLIT1O75093 1534 aa24.03■■□□□ 1.44
GCFC2-202ENST00000409857 STAG3Q9UJ98 1225 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms