RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 SLC4A1APQ9BWU0 796 aaKnown RBP18.56■□□□□ 0.56
PMS1-204ENST00000409823 MPHOSPH9Q99550 1183 aa18.55■□□□□ 0.56
PMS1-204ENST00000409823 ARID4BQ4LE39 1312 aaPredicted RBP18.55■□□□□ 0.56
PMS1-204ENST00000409823 ARHGEF40Q8TER5 1519 aa18.52■□□□□ 0.56
PMS1-204ENST00000409823 SIGLEC1Q9BZZ2 1709 aa18.5■□□□□ 0.55
PMS1-204ENST00000409823 PZPP20742 1482 aa18.5■□□□□ 0.55
PMS1-204ENST00000409823 PKD2Q13563 968 aa18.49■□□□□ 0.55
PMS1-204ENST00000409823 WASHC2CQ9Y4E1 1318 aa18.46■□□□□ 0.55
PMS1-204ENST00000409823 FAM135AQ9P2D6 1515 aa18.46■□□□□ 0.55
PMS1-204ENST00000409823 UNC13BO14795 1591 aa18.46■□□□□ 0.55
PMS1-204ENST00000409823 EIF2AK4Q9P2K8 1649 aaKnown RBP18.45■□□□□ 0.54
PMS1-204ENST00000409823 KANK1Q14678 1352 aa18.45■□□□□ 0.54
PMS1-204ENST00000409823 SIN3AQ96ST3 1273 aa18.44■□□□□ 0.54
PMS1-204ENST00000409823 MROH1Q8NDA8 1641 aa18.44■□□□□ 0.54
PMS1-204ENST00000409823 NEUROD1Q13562 356 aa18.43■□□□□ 0.54
PMS1-204ENST00000409823 DEPDC5O75140 1603 aa18.42■□□□□ 0.54
PMS1-204ENST00000409823 ACIN1Q9UKV3 1341 aaKnown RBP18.41■□□□□ 0.54
PMS1-204ENST00000409823 PRDM15P57071 1507 aaPredicted RBP18.41■□□□□ 0.54
PMS1-204ENST00000409823 KDM5DQ9BY66 1539 aa18.41■□□□□ 0.54
PMS1-204ENST00000409823 REREQ9P2R6 1566 aa18.41■□□□□ 0.54
PMS1-204ENST00000409823 RNF17Q9BXT8 1623 aaKnown RBP18.4■□□□□ 0.54
PMS1-204ENST00000409823 IQGAP3Q86VI3 1631 aa18.39■□□□□ 0.53
PMS1-204ENST00000409823 AGLP35573 1532 aa18.39■□□□□ 0.53
PMS1-204ENST00000409823 PLPPR3Q6T4P5 718 aa18.37■□□□□ 0.53
PMS1-204ENST00000409823 ESF1Q9H501 851 aaKnown RBP18.36■□□□□ 0.53
PMS1-204ENST00000409823 BCORL1Q5H9F3 1711 aa18.36■□□□□ 0.53
PMS1-204ENST00000409823 VWDEQ8N2E2 1590 aa18.36■□□□□ 0.53
PMS1-204ENST00000409823 CEP152O94986 1710 aa18.36■□□□□ 0.53
PMS1-204ENST00000409823 ABCC3O15438 1527 aa18.35■□□□□ 0.53
PMS1-204ENST00000409823 ANKRD30BQ9BXX2 1392 aa18.34■□□□□ 0.53
PMS1-204ENST00000409823 CLSPNQ9HAW4 1339 aa18.32■□□□□ 0.52
PMS1-204ENST00000409823 FBXO31Q5XUX0 539 aaPredicted RBP18.31■□□□□ 0.52
PMS1-204ENST00000409823 NPATQ14207 1427 aa18.31■□□□□ 0.52
PMS1-204ENST00000409823 E9PCH4 1651 aa18.31■□□□□ 0.52
PMS1-204ENST00000409823 CFAP65Q6ZU64 1925 aaKnown RBP18.3■□□□□ 0.52
PMS1-204ENST00000409823 TET3O43151 1660 aa18.3■□□□□ 0.52
PMS1-204ENST00000409823 EFCAB6Q5THR3 1501 aa18.3■□□□□ 0.52
PMS1-204ENST00000409823 PLA2R1Q13018 1463 aa18.29■□□□□ 0.52
PMS1-204ENST00000409823 CEBPAP49715 358 aaPredicted RBP18.29■□□□□ 0.52
PMS1-204ENST00000409823 LMTK2Q8IWU2 1503 aa18.29■□□□□ 0.52
PMS1-204ENST00000409823 CLTCQ00610 1675 aaKnown RBP18.28■□□□□ 0.52
PMS1-204ENST00000409823 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
PMS1-204ENST00000409823 CAMSAP1Q5T5Y3 1602 aa18.27■□□□□ 0.51
PMS1-204ENST00000409823 ZMYM3Q14202 1370 aa18.26■□□□□ 0.51
PMS1-204ENST00000409823 CCDC144AA2RUR9 1427 aa18.24■□□□□ 0.51
PMS1-204ENST00000409823 UGGT1Q9NYU2 1555 aa18.24■□□□□ 0.51
PMS1-204ENST00000409823 ZC3H13Q5T200 1668 aaKnown RBP18.23■□□□□ 0.51
PMS1-204ENST00000409823 RGL3Q3MIN7 710 aa18.23■□□□□ 0.51
PMS1-204ENST00000409823 CHGAP10645 457 aaKnown RBP18.21■□□□□ 0.51
PMS1-204ENST00000409823 PTPRTO14522 1441 aa18.21■□□□□ 0.51
PMS1-204ENST00000409823 TONSLQ96HA7 1378 aa18.2■□□□□ 0.5
PMS1-204ENST00000409823 ARHGAP31Q2M1Z3 1444 aa18.2■□□□□ 0.5
PMS1-204ENST00000409823 RPRD2Q5VT52 1461 aaKnown RBP18.2■□□□□ 0.5
PMS1-204ENST00000409823 ZEB1P37275 1124 aaPredicted RBP18.2■□□□□ 0.5
PMS1-204ENST00000409823 MADDQ8WXG6 1647 aa18.19■□□□□ 0.5
PMS1-204ENST00000409823 SPHKAPQ2M3C7 1700 aa18.19■□□□□ 0.5
PMS1-204ENST00000409823 FER1L4A9Z1Z3 1794 aa18.18■□□□□ 0.5
PMS1-204ENST00000409823 L3MBTL2Q969R5 705 aa18.18■□□□□ 0.5
PMS1-204ENST00000409823 CNTLNQ9NXG0 1405 aa18.18■□□□□ 0.5
PMS1-204ENST00000409823 TRPM2O94759 1503 aa18.18■□□□□ 0.5
PMS1-204ENST00000409823 IDI1Q13907 227 aa18.17■□□□□ 0.5
PMS1-204ENST00000409823 NOS1P29475 1434 aa18.17■□□□□ 0.5
PMS1-204ENST00000409823 ERVK-7P63135 1459 aa18.16■□□□□ 0.5
PMS1-204ENST00000409823 CLTCL1P53675 1640 aa18.15■□□□□ 0.5
PMS1-204ENST00000409823 KDM2AQ9Y2K7 1162 aa18.15■□□□□ 0.5
PMS1-204ENST00000409823 SYNMO15061 1565 aa18.15■□□□□ 0.5
PMS1-204ENST00000409823 RIMS1Q86UR5 1692 aaKnown RBP18.14■□□□□ 0.49
PMS1-204ENST00000409823 PREX1Q8TCU6 1659 aa18.14■□□□□ 0.49
PMS1-204ENST00000409823 ZNF326Q5BKZ1 582 aaKnown RBP18.13■□□□□ 0.49
PMS1-204ENST00000409823 ADAMTSL3P82987 1691 aa18.13■□□□□ 0.49
PMS1-204ENST00000409823 DCAF11Q8TEB1 546 aa18.13■□□□□ 0.49
PMS1-204ENST00000409823 SENP3Q9H4L4 574 aaPredicted RBP18.11■□□□□ 0.49
PMS1-204ENST00000409823 C3P01024 1663 aa18.11■□□□□ 0.49
PMS1-204ENST00000409823 SLC52A1Q9NWF4 448 aa18.11■□□□□ 0.49
PMS1-204ENST00000409823 STAG3Q9UJ98 1225 aa18.11■□□□□ 0.49
PMS1-204ENST00000409823 KDM4FA0A1W2PPD8 638 aa18.1■□□□□ 0.49
PMS1-204ENST00000409823 TNRQ92752 1358 aa18.1■□□□□ 0.49
PMS1-204ENST00000409823 NUTM2DQ5VT03 806 aaPredicted RBP18.1■□□□□ 0.49
PMS1-204ENST00000409823 MROH2AA6NES4 1674 aa18.09■□□□□ 0.49
PMS1-204ENST00000409823 SPATA31D1Q6ZQQ2 1576 aa18.09■□□□□ 0.49
PMS1-204ENST00000409823 SPATA31E1Q6ZUB1 1445 aa18.08■□□□□ 0.48
PMS1-204ENST00000409823 PPP1R15AO75807 674 aaPredicted RBP18.08■□□□□ 0.48
PMS1-204ENST00000409823 TIMELESSQ9UNS1 1208 aa18.08■□□□□ 0.48
PMS1-204ENST00000409823 PTPRMP28827 1452 aa18.06■□□□□ 0.48
PMS1-204ENST00000409823 PIK3C2BO00750 1634 aa18.04■□□□□ 0.48
PMS1-204ENST00000409823 NBPF8Q3BBV2 869 aa18.04■□□□□ 0.48
PMS1-204ENST00000409823 KIF1BO60333 1816 aa18.02■□□□□ 0.47
PMS1-204ENST00000409823 ADGRB3O60242 1522 aa18■□□□□ 0.47
PMS1-204ENST00000409823 ADGRF5Q8IZF2 1346 aa17.99■□□□□ 0.47
PMS1-204ENST00000409823 TMEM131LA2VDJ0 1609 aa17.98■□□□□ 0.47
PMS1-204ENST00000409823 MYO5BQ9ULV0 1848 aa17.98■□□□□ 0.47
PMS1-204ENST00000409823 A2ML1A8K2U0 1454 aa17.98■□□□□ 0.47
PMS1-204ENST00000409823 NLRP1Q9C000 1473 aa17.96■□□□□ 0.46
PMS1-204ENST00000409823 MYO3AQ8NEV4 1616 aa17.93■□□□□ 0.46
PMS1-204ENST00000409823 PRAG1Q86YV5 1406 aa17.93■□□□□ 0.46
PMS1-204ENST00000409823 NBPF1Q3BBV0 1214 aa17.92■□□□□ 0.46
PMS1-204ENST00000409823 HIRIP3Q9BW71 556 aaPredicted RBP17.92■□□□□ 0.46
PMS1-204ENST00000409823 RPGRIP1LQ68CZ1 1315 aa17.92■□□□□ 0.46
PMS1-204ENST00000409823 VGFO15240 615 aaPredicted RBP17.91■□□□□ 0.46
PMS1-204ENST00000409823 NEXMIFQ5QGS0 1516 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms