RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 RRP7BPQ9NSQ0 103 aa47.86■■■■■ 5.25
TRAF3IP1-203ENST00000409739 PPP6R1Q9UPN7 881 aa47.86■■■■■ 5.25
TRAF3IP1-203ENST00000409739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP47.86■■■■■ 5.25
TRAF3IP1-203ENST00000409739 NCOA1Q15788 1441 aa47.85■■■■■ 5.25
TRAF3IP1-203ENST00000409739 ERBINQ96RT1 1412 aa47.85■■■■■ 5.25
TRAF3IP1-203ENST00000409739 PREX1Q8TCU6 1659 aa47.85■■■■■ 5.25
TRAF3IP1-203ENST00000409739 SETD1BQ9UPS6 1966 aaKnown RBP47.84■■■■■ 5.25
TRAF3IP1-203ENST00000409739 MROH1Q8NDA8 1641 aa47.84■■■■■ 5.25
TRAF3IP1-203ENST00000409739 RRBP1Q9P2E9 1410 aaKnown RBP47.83■■■■■ 5.25
TRAF3IP1-203ENST00000409739 KDM5DQ9BY66 1539 aa47.83■■■■■ 5.25
TRAF3IP1-203ENST00000409739 PTPRKQ15262 1439 aa47.82■■■■■ 5.25
TRAF3IP1-203ENST00000409739 LMTK3Q96Q04 1460 aa47.81■■■■■ 5.24
TRAF3IP1-203ENST00000409739 ZMYM3Q14202 1370 aa47.78■■■■■ 5.24
TRAF3IP1-203ENST00000409739 ZC3H13Q5T200 1668 aaKnown RBP47.76■■■■■ 5.24
TRAF3IP1-203ENST00000409739 DEPDC5O75140 1603 aa47.74■■■■■ 5.23
TRAF3IP1-203ENST00000409739 CEP152O94986 1710 aa47.72■■■■■ 5.23
TRAF3IP1-203ENST00000409739 PRDM15P57071 1507 aaPredicted RBP47.71■■■■■ 5.23
TRAF3IP1-203ENST00000409739 ABCC3O15438 1527 aa47.68■■■■■ 5.22
TRAF3IP1-203ENST00000409739 NPATQ14207 1427 aa47.66■■■■■ 5.22
TRAF3IP1-203ENST00000409739 WASHC2CQ9Y4E1 1318 aa47.64■■■■■ 5.22
TRAF3IP1-203ENST00000409739 ROCK1Q13464 1354 aa47.63■■■■■ 5.22
TRAF3IP1-203ENST00000409739 ITGAEP38570 1179 aa47.6■■■■■ 5.21
TRAF3IP1-203ENST00000409739 CAMSAP1Q5T5Y3 1602 aa47.59■■■■■ 5.21
TRAF3IP1-203ENST00000409739 UHRF1BP1Q6BDS2 1440 aa47.59■■■■■ 5.21
TRAF3IP1-203ENST00000409739 PZPP20742 1482 aa47.58■■■■■ 5.21
TRAF3IP1-203ENST00000409739 ANKRD50Q9ULJ7 1429 aa47.57■■■■■ 5.21
TRAF3IP1-203ENST00000409739 MYO3AQ8NEV4 1616 aa47.55■■■■■ 5.2
TRAF3IP1-203ENST00000409739 VWDEQ8N2E2 1590 aa47.5■■■■■ 5.19
TRAF3IP1-203ENST00000409739 ZNF142P52746 1687 aaPredicted RBP47.49■■■■■ 5.19
TRAF3IP1-203ENST00000409739 HSPA2P54652 639 aa47.46■■■■■ 5.19
TRAF3IP1-203ENST00000409739 CFAP65Q6ZU64 1925 aaKnown RBP47.46■■■■■ 5.19
TRAF3IP1-203ENST00000409739 UNC13BO14795 1591 aa47.44■■■■■ 5.18
TRAF3IP1-203ENST00000409739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP47.43■■■■■ 5.183e-6■■□□□ 14
TRAF3IP1-203ENST00000409739 KANK1Q14678 1352 aa47.41■■■■■ 5.18
TRAF3IP1-203ENST00000409739 LMTK2Q8IWU2 1503 aa47.39■■■■■ 5.18
TRAF3IP1-203ENST00000409739 GCC2Q8IWJ2 1684 aa47.38■■■■■ 5.18
TRAF3IP1-203ENST00000409739 CEP170BQ9Y4F5 1589 aaPredicted RBP47.38■■■■■ 5.18
TRAF3IP1-203ENST00000409739 FBXO31Q5XUX0 539 aaPredicted RBP47.38■■■■■ 5.18
TRAF3IP1-203ENST00000409739 SPATA31D1Q6ZQQ2 1576 aa47.36■■■■■ 5.17
TRAF3IP1-203ENST00000409739 TNRQ92752 1358 aa47.34■■■■■ 5.17
TRAF3IP1-203ENST00000409739 ERVK-7P63135 1459 aa47.32■■■■■ 5.17
TRAF3IP1-203ENST00000409739 ARHGAP31Q2M1Z3 1444 aa47.31■■■■■ 5.16
TRAF3IP1-203ENST00000409739 STRCQ7RTU9 1775 aa47.29■■■■■ 5.16
TRAF3IP1-203ENST00000409739 EFCAB6Q5THR3 1501 aa47.29■■■■■ 5.16
TRAF3IP1-203ENST00000409739 TET3O43151 1660 aa47.26■■■■■ 5.16
TRAF3IP1-203ENST00000409739 A2ML1A8K2U0 1454 aa47.25■■■■■ 5.15
TRAF3IP1-203ENST00000409739 IQGAP3Q86VI3 1631 aa47.24■■■■■ 5.15
TRAF3IP1-203ENST00000409739 NAIPQ13075 1403 aa47.22■■■■■ 5.15
TRAF3IP1-203ENST00000409739 NLRP1Q9C000 1473 aa47.2■■■■■ 5.15
TRAF3IP1-203ENST00000409739 HFM1A2PYH4 1435 aa47.16■■■■■ 5.14
TRAF3IP1-203ENST00000409739 E9PCH4 1651 aa47.1■■■■■ 5.13
TRAF3IP1-203ENST00000409739 RPRD2Q5VT52 1461 aaKnown RBP47.08■■■■■ 5.13
TRAF3IP1-203ENST00000409739 PLA2R1Q13018 1463 aa47.08■■■■■ 5.13
TRAF3IP1-203ENST00000409739 SYNMO15061 1565 aa47.06■■■■■ 5.12
TRAF3IP1-203ENST00000409739 UGGT1Q9NYU2 1555 aa47.06■■■■■ 5.12
TRAF3IP1-203ENST00000409739 NUP155O75694 1391 aa47.05■■■■■ 5.12
TRAF3IP1-203ENST00000409739 UBR1Q8IWV7 1749 aa47.03■■■■■ 5.12
TRAF3IP1-203ENST00000409739 NOS1P29475 1434 aa47.01■■■■■ 5.12
TRAF3IP1-203ENST00000409739 POLR1AO95602 1720 aaPredicted RBP47■■■■■ 5.11
TRAF3IP1-203ENST00000409739 PIK3C2BO00750 1634 aa46.98■■■■■ 5.11
TRAF3IP1-203ENST00000409739 KDM5AP29375 1690 aaKnown RBP46.9■■■■■ 5.1
TRAF3IP1-203ENST00000409739 PTPRTO14522 1441 aa46.88■■■■■ 5.1
TRAF3IP1-203ENST00000409739 DMRT2Q9Y5R5 561 aa46.86■■■■■ 5.09
TRAF3IP1-203ENST00000409739 NCKAP5LQ9HCH0 1330 aa46.85■■■■■ 5.09
TRAF3IP1-203ENST00000409739 THEMISQ8N1K5 641 aaPredicted RBP46.85■■■■■ 5.09
TRAF3IP1-203ENST00000409739 NEURL4Q96JN8 1562 aa46.84■■■■■ 5.09
TRAF3IP1-203ENST00000409739 PKD2Q13563 968 aa46.83■■■■■ 5.09
TRAF3IP1-203ENST00000409739 SPHKAPQ2M3C7 1700 aa46.82■■■■■ 5.09
TRAF3IP1-203ENST00000409739 MYO5BQ9ULV0 1848 aa46.79■■■■■ 5.08
TRAF3IP1-203ENST00000409739 ADGRB3O60242 1522 aa46.79■■■■■ 5.08
TRAF3IP1-203ENST00000409739 IDI1Q13907 227 aa46.77■■■■■ 5.08
TRAF3IP1-203ENST00000409739 SLIT1O75093 1534 aa46.74■■■■■ 5.07
TRAF3IP1-203ENST00000409739 SLC52A1Q9NWF4 448 aa46.73■■■■■ 5.07
TRAF3IP1-203ENST00000409739 TRIM52Q96A61 297 aa46.72■■■■■ 5.07
TRAF3IP1-203ENST00000409739 ARHGAP23Q9P227 1491 aa46.71■■■■■ 5.07
TRAF3IP1-203ENST00000409739 SETD5Q9C0A6 1442 aa46.69■■■■■ 5.06
TRAF3IP1-203ENST00000409739 ANKLE2Q86XL3 938 aa46.68■■■■■ 5.06
TRAF3IP1-203ENST00000409739 IQGAP1P46940 1657 aa46.66■■■■■ 5.06
TRAF3IP1-203ENST00000409739 TMEM131LA2VDJ0 1609 aa46.66■■■■■ 5.06
TRAF3IP1-203ENST00000409739 MED14O60244 1454 aa46.65■■■■■ 5.06
TRAF3IP1-203ENST00000409739 STAG3Q9UJ98 1225 aa46.65■■■■■ 5.06
TRAF3IP1-203ENST00000409739 SCAF11Q99590 1463 aaKnown RBP46.62■■■■■ 5.05
TRAF3IP1-203ENST00000409739 TMEM2Q9UHN6 1383 aa46.6■■■■■ 5.05
TRAF3IP1-203ENST00000409739 TRPM2O94759 1503 aa46.59■■■■■ 5.05
TRAF3IP1-203ENST00000409739 NPHP4O75161 1426 aaPredicted RBP46.58■■■■■ 5.05
TRAF3IP1-203ENST00000409739 SLC4A1APQ9BWU0 796 aaKnown RBP46.56■■■■■ 5.04
TRAF3IP1-203ENST00000409739 RAB3GAP2Q9H2M9 1393 aa46.55■■■■■ 5.04
TRAF3IP1-203ENST00000409739 CLTCL1P53675 1640 aa46.54■■■■■ 5.04
TRAF3IP1-203ENST00000409739 LTBP4Q8N2S1 1624 aa46.52■■■■■ 5.04
TRAF3IP1-203ENST00000409739 LTKP29376 864 aa46.51■■■■■ 5.04
TRAF3IP1-203ENST00000409739 TXNDC2Q86VQ3 553 aa46.47■■■■■ 5.03
TRAF3IP1-203ENST00000409739 KIF1BO60333 1816 aa46.47■■■■■ 5.03
TRAF3IP1-203ENST00000409739 EID1Q9Y6B2 187 aa46.45■■■■■ 5.03
TRAF3IP1-203ENST00000409739 ACIN1Q9UKV3 1341 aaKnown RBP46.45■■■■■ 5.03
TRAF3IP1-203ENST00000409739 ZFYVE9O95405 1425 aa46.44■■■■■ 5.02
TRAF3IP1-203ENST00000409739 CHGAP10645 457 aaKnown RBP46.41■■■■■ 5.02
TRAF3IP1-203ENST00000409739 ZNF335Q9H4Z2 1342 aaPredicted RBP46.41■■■■■ 5.02
TRAF3IP1-203ENST00000409739 MPHOSPH9Q99550 1183 aa46.39■■■■■ 5.02
TRAF3IP1-203ENST00000409739 RIMS2Q9UQ26 1411 aa46.37■■■■■ 5.01
TRAF3IP1-203ENST00000409739 CERKQ8TCT0 537 aa46.35■■■■■ 5.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms