RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 SETD5Q9C0A6 1442 aa24.95■■□□□ 1.58
SUMO1-208ENST00000409627 ADAMTSL3P82987 1691 aa24.94■■□□□ 1.58
SUMO1-208ENST00000409627 FAM135AQ9P2D6 1515 aa24.93■■□□□ 1.58
SUMO1-208ENST00000409627 FER1L4A9Z1Z3 1794 aa24.92■■□□□ 1.58
SUMO1-208ENST00000409627 ZC3H13Q5T200 1668 aaKnown RBP24.91■■□□□ 1.58
SUMO1-208ENST00000409627 MLECQ14165 292 aa24.89■■□□□ 1.58
SUMO1-208ENST00000409627 GGT6Q6P531 493 aa24.89■■□□□ 1.58
SUMO1-208ENST00000409627 VWDEQ8N2E2 1590 aa24.88■■□□□ 1.57
SUMO1-208ENST00000409627 KDM5DQ9BY66 1539 aa24.88■■□□□ 1.57
SUMO1-208ENST00000409627 MADDQ8WXG6 1647 aa24.88■■□□□ 1.57
SUMO1-208ENST00000409627 PPP6R1Q9UPN7 881 aa24.88■■□□□ 1.57
SUMO1-208ENST00000409627 RAB3GAP2Q9H2M9 1393 aa24.86■■□□□ 1.57
SUMO1-208ENST00000409627 CEP152O94986 1710 aa24.86■■□□□ 1.57
SUMO1-208ENST00000409627 IQGAP3Q86VI3 1631 aa24.86■■□□□ 1.57
SUMO1-208ENST00000409627 CLTCQ00610 1675 aaKnown RBP24.85■■□□□ 1.57
SUMO1-208ENST00000409627 MROH2AA6NES4 1674 aa24.85■■□□□ 1.57
SUMO1-208ENST00000409627 ACIN1Q9UKV3 1341 aaKnown RBP24.84■■□□□ 1.57
SUMO1-208ENST00000409627 KANK1Q14678 1352 aa24.83■■□□□ 1.57
SUMO1-208ENST00000409627 ABCC3O15438 1527 aa24.83■■□□□ 1.57
SUMO1-208ENST00000409627 RIMS1Q86UR5 1692 aaKnown RBP24.83■■□□□ 1.57
SUMO1-208ENST00000409627 CNTLNQ9NXG0 1405 aa24.83■■□□□ 1.57
SUMO1-208ENST00000409627 LMTK2Q8IWU2 1503 aa24.82■■□□□ 1.56
SUMO1-208ENST00000409627 HRCP23327 699 aa24.8■■□□□ 1.56
SUMO1-208ENST00000409627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.8■■□□□ 1.56
SUMO1-208ENST00000409627 PCGF6Q9BYE7 350 aa24.8■■□□□ 1.56
SUMO1-208ENST00000409627 CAMSAP1Q5T5Y3 1602 aa24.79■■□□□ 1.56
SUMO1-208ENST00000409627 TET3O43151 1660 aa24.78■■□□□ 1.56
SUMO1-208ENST00000409627 WASHC2CQ9Y4E1 1318 aa24.78■■□□□ 1.56
SUMO1-208ENST00000409627 NUP155O75694 1391 aa24.78■■□□□ 1.56
SUMO1-208ENST00000409627 ESF1Q9H501 851 aaKnown RBP24.77■■□□□ 1.56
SUMO1-208ENST00000409627 EFCAB6Q5THR3 1501 aa24.75■■□□□ 1.55
SUMO1-208ENST00000409627 C3P01024 1663 aa24.75■■□□□ 1.55
SUMO1-208ENST00000409627 KDM4FA0A1W2PPD8 638 aa24.74■■□□□ 1.55
SUMO1-208ENST00000409627 PZPP20742 1482 aa24.73■■□□□ 1.55
SUMO1-208ENST00000409627 TRIM52Q96A61 297 aa24.73■■□□□ 1.55
SUMO1-208ENST00000409627 PTPRMP28827 1452 aa24.7■■□□□ 1.55
SUMO1-208ENST00000409627 ARHGAP31Q2M1Z3 1444 aa24.7■■□□□ 1.55
SUMO1-208ENST00000409627 ZMYM3Q14202 1370 aa24.7■■□□□ 1.55
SUMO1-208ENST00000409627 E9PCH4 1651 aa24.69■■□□□ 1.54
SUMO1-208ENST00000409627 RPRD2Q5VT52 1461 aaKnown RBP24.67■■□□□ 1.54
SUMO1-208ENST00000409627 NPATQ14207 1427 aa24.66■■□□□ 1.54
SUMO1-208ENST00000409627 PREX1Q8TCU6 1659 aa24.64■■□□□ 1.53
SUMO1-208ENST00000409627 SLC4A1APQ9BWU0 796 aaKnown RBP24.62■■□□□ 1.53
SUMO1-208ENST00000409627 SPATA31D1Q6ZQQ2 1576 aa24.62■■□□□ 1.53
SUMO1-208ENST00000409627 CFAP65Q6ZU64 1925 aaKnown RBP24.61■■□□□ 1.53
SUMO1-208ENST00000409627 MPHOSPH9Q99550 1183 aa24.61■■□□□ 1.53
SUMO1-208ENST00000409627 ERVK-7P63135 1459 aa24.59■■□□□ 1.53
SUMO1-208ENST00000409627 SPHKAPQ2M3C7 1700 aa24.59■■□□□ 1.53
SUMO1-208ENST00000409627 CEBPAP49715 358 aaPredicted RBP24.58■■□□□ 1.53
SUMO1-208ENST00000409627 NOS1P29475 1434 aa24.56■■□□□ 1.52
SUMO1-208ENST00000409627 PKD2Q13563 968 aa24.56■■□□□ 1.52
SUMO1-208ENST00000409627 SYNMO15061 1565 aa24.54■■□□□ 1.52
SUMO1-208ENST00000409627 SETD1BQ9UPS6 1966 aaKnown RBP24.53■■□□□ 1.52
SUMO1-208ENST00000409627 FBXO31Q5XUX0 539 aaPredicted RBP24.53■■□□□ 1.52
SUMO1-208ENST00000409627 PTPRTO14522 1441 aa24.52■■□□□ 1.52
SUMO1-208ENST00000409627 PLPPR3Q6T4P5 718 aa24.52■■□□□ 1.52
SUMO1-208ENST00000409627 TRPM2O94759 1503 aa24.51■■□□□ 1.51
SUMO1-208ENST00000409627 MYO3AQ8NEV4 1616 aa24.51■■□□□ 1.51
SUMO1-208ENST00000409627 TNRQ92752 1358 aa24.51■■□□□ 1.51
SUMO1-208ENST00000409627 DHX57Q6P158 1386 aaKnown RBP24.49■■□□□ 1.51
SUMO1-208ENST00000409627 PIK3C2BO00750 1634 aa24.49■■□□□ 1.51
SUMO1-208ENST00000409627 PLA2R1Q13018 1463 aa24.47■■□□□ 1.51
SUMO1-208ENST00000409627 ZNF142P52746 1687 aaPredicted RBP24.46■■□□□ 1.51
SUMO1-208ENST00000409627 FOXD1Q16676 465 aa24.46■■□□□ 1.51
SUMO1-208ENST00000409627 NLRP1Q9C000 1473 aa24.45■■□□□ 1.51
SUMO1-208ENST00000409627 CLTCL1P53675 1640 aa24.43■■□□□ 1.5
SUMO1-208ENST00000409627 UGGT1Q9NYU2 1555 aa24.42■■□□□ 1.5
SUMO1-208ENST00000409627 KDM5AP29375 1690 aaKnown RBP24.42■■□□□ 1.5
SUMO1-208ENST00000409627 CEP170BQ9Y4F5 1589 aaPredicted RBP24.42■■□□□ 1.5
SUMO1-208ENST00000409627 SLC52A1Q9NWF4 448 aa24.41■■□□□ 1.5
SUMO1-208ENST00000409627 UHRF1BP1Q6BDS2 1440 aa24.41■■□□□ 1.5
SUMO1-208ENST00000409627 ANKRD30BQ9BXX2 1392 aa24.41■■□□□ 1.5
SUMO1-208ENST00000409627 A2ML1A8K2U0 1454 aa24.39■■□□□ 1.5
SUMO1-208ENST00000409627 KIF1BO60333 1816 aa24.38■■□□□ 1.49
SUMO1-208ENST00000409627 UBR1Q8IWV7 1749 aa24.38■■□□□ 1.49
SUMO1-208ENST00000409627 CCDC144AA2RUR9 1427 aa24.37■■□□□ 1.49
SUMO1-208ENST00000409627 ADGRB3O60242 1522 aa24.37■■□□□ 1.49
SUMO1-208ENST00000409627 IDI1Q13907 227 aa24.36■■□□□ 1.49
SUMO1-208ENST00000409627 TMEM131LA2VDJ0 1609 aa24.35■■□□□ 1.49
SUMO1-208ENST00000409627 MYO5BQ9ULV0 1848 aa24.34■■□□□ 1.49
SUMO1-208ENST00000409627 LMTK3Q96Q04 1460 aa24.33■■□□□ 1.49
SUMO1-208ENST00000409627 NEURL4Q96JN8 1562 aa24.31■■□□□ 1.48
SUMO1-208ENST00000409627 AEBP2Q6ZN18 517 aaPredicted RBP24.29■■□□□ 1.48
SUMO1-208ENST00000409627 CLSPNQ9HAW4 1339 aa24.26■■□□□ 1.47
SUMO1-208ENST00000409627 STAG3Q9UJ98 1225 aa24.25■■□□□ 1.47
SUMO1-208ENST00000409627 SPATA31E1Q6ZUB1 1445 aa24.25■■□□□ 1.47
SUMO1-208ENST00000409627 THEMISQ8N1K5 641 aaPredicted RBP24.23■■□□□ 1.47
SUMO1-208ENST00000409627 SLIT1O75093 1534 aa24.23■■□□□ 1.47
SUMO1-208ENST00000409627 ARHGAP23Q9P227 1491 aa24.22■■□□□ 1.47
SUMO1-208ENST00000409627 CHGAP10645 457 aaKnown RBP24.22■■□□□ 1.47
SUMO1-208ENST00000409627 CCER1Q8TC90 406 aaPredicted RBP24.22■■□□□ 1.47
SUMO1-208ENST00000409627 IFT172Q9UG01 1749 aa24.2■■□□□ 1.46
SUMO1-208ENST00000409627 TMEM2Q9UHN6 1383 aa24.19■■□□□ 1.46
SUMO1-208ENST00000409627 PPLO60437 1756 aa24.19■■□□□ 1.46
SUMO1-208ENST00000409627 POLR1AO95602 1720 aaPredicted RBP24.18■■□□□ 1.46
SUMO1-208ENST00000409627 SIN3AQ96ST3 1273 aa24.18■■□□□ 1.46
SUMO1-208ENST00000409627 NEXMIFQ5QGS0 1516 aa24.18■■□□□ 1.46
SUMO1-208ENST00000409627 ZFYVE9O95405 1425 aa24.17■■□□□ 1.46
SUMO1-208ENST00000409627 RIMS2Q9UQ26 1411 aa24.15■■□□□ 1.46
SUMO1-208ENST00000409627 HSPA2P54652 639 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms