RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 WASHC2CQ9Y4E1 1318 aa30.49■■■□□ 2.47
TSPAN4-209ENST00000409543 DMRT2Q9Y5R5 561 aa30.49■■■□□ 2.47
TSPAN4-209ENST00000409543 CROCC2H7BZ55 1655 aa30.48■■■□□ 2.47
TSPAN4-209ENST00000409543 DAPK1P53355 1430 aa30.47■■■□□ 2.47
TSPAN4-209ENST00000409543 EIF2AK4Q9P2K8 1649 aaKnown RBP30.47■■■□□ 2.47
TSPAN4-209ENST00000409543 DNMT1P26358 1616 aaKnown RBP30.46■■■□□ 2.47
TSPAN4-209ENST00000409543 RNF17Q9BXT8 1623 aaKnown RBP30.46■■■□□ 2.47
TSPAN4-209ENST00000409543 DUOX2Q9NRD8 1548 aa30.46■■■□□ 2.47
TSPAN4-209ENST00000409543 MYO3AQ8NEV4 1616 aa30.43■■■□□ 2.46
TSPAN4-209ENST00000409543 KIF15Q9NS87 1388 aa30.42■■■□□ 2.46
TSPAN4-209ENST00000409543 PZPP20742 1482 aa30.42■■■□□ 2.46
TSPAN4-209ENST00000409543 NCOA1Q15788 1441 aa30.4■■■□□ 2.46
TSPAN4-209ENST00000409543 ZNF142P52746 1687 aaPredicted RBP30.4■■■□□ 2.46
TSPAN4-209ENST00000409543 RRP7BPQ9NSQ0 103 aa30.4■■■□□ 2.46
TSPAN4-209ENST00000409543 CEP170BQ9Y4F5 1589 aaPredicted RBP30.38■■■□□ 2.45
TSPAN4-209ENST00000409543 FBXO31Q5XUX0 539 aaPredicted RBP30.38■■■□□ 2.45
TSPAN4-209ENST00000409543 PTPRTO14522 1441 aa30.38■■■□□ 2.45
TSPAN4-209ENST00000409543 CAMSAP1Q5T5Y3 1602 aa30.37■■■□□ 2.45
TSPAN4-209ENST00000409543 ERBINQ96RT1 1412 aa30.36■■■□□ 2.45
TSPAN4-209ENST00000409543 FBXO41Q8TF61 875 aa30.35■■■□□ 2.45
TSPAN4-209ENST00000409543 TNRQ92752 1358 aa30.35■■■□□ 2.45
TSPAN4-209ENST00000409543 ABCC3O15438 1527 aa30.35■■■□□ 2.45
TSPAN4-209ENST00000409543 MROH1Q8NDA8 1641 aa30.35■■■□□ 2.45
TSPAN4-209ENST00000409543 ZC3H13Q5T200 1668 aaKnown RBP30.35■■■□□ 2.45
TSPAN4-209ENST00000409543 ANKRD30AQ9BXX3 1397 aa30.34■■■□□ 2.45
TSPAN4-209ENST00000409543 A2ML1A8K2U0 1454 aa30.33■■■□□ 2.45
TSPAN4-209ENST00000409543 FAM50AQ14320 339 aaKnown RBP30.33■■■□□ 2.45
TSPAN4-209ENST00000409543 CHIC2Q9UKJ5 165 aa30.33■■■□□ 2.45
TSPAN4-209ENST00000409543 PLA2R1Q13018 1463 aa30.31■■■□□ 2.44
TSPAN4-209ENST00000409543 CERKQ8TCT0 537 aa30.28■■■□□ 2.44
TSPAN4-209ENST00000409543 PRDM15P57071 1507 aaPredicted RBP30.27■■■□□ 2.44
TSPAN4-209ENST00000409543 NCKAP5LQ9HCH0 1330 aa30.26■■■□□ 2.44
TSPAN4-209ENST00000409543 ADGRL2O95490 1459 aa30.26■■■□□ 2.44
TSPAN4-209ENST00000409543 PKD2Q13563 968 aa30.26■■■□□ 2.43
TSPAN4-209ENST00000409543 CEP152O94986 1710 aa30.24■■■□□ 2.43
TSPAN4-209ENST00000409543 NLRP1Q9C000 1473 aa30.24■■■□□ 2.43
TSPAN4-209ENST00000409543 DEPDC5O75140 1603 aa30.22■■■□□ 2.43
TSPAN4-209ENST00000409543 SPATA31D1Q6ZQQ2 1576 aa30.21■■■□□ 2.43
TSPAN4-209ENST00000409543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.2■■■□□ 2.43
TSPAN4-209ENST00000409543 ERVK-7P63135 1459 aa30.19■■■□□ 2.42
TSPAN4-209ENST00000409543 KANK1Q14678 1352 aa30.18■■■□□ 2.42
TSPAN4-209ENST00000409543 ARHGAP31Q2M1Z3 1444 aa30.18■■■□□ 2.42
TSPAN4-209ENST00000409543 PPARGC1BQ86YN6 1023 aaKnown RBP30.16■■■□□ 2.42
TSPAN4-209ENST00000409543 THEMISQ8N1K5 641 aaPredicted RBP30.16■■■□□ 2.42
TSPAN4-209ENST00000409543 UGGT1Q9NYU2 1555 aa30.14■■■□□ 2.42
TSPAN4-209ENST00000409543 ANKRD50Q9ULJ7 1429 aa30.12■■■□□ 2.41
TSPAN4-209ENST00000409543 VWDEQ8N2E2 1590 aa30.11■■■□□ 2.41
TSPAN4-209ENST00000409543 LTBP4Q8N2S1 1624 aa30.11■■■□□ 2.41
TSPAN4-209ENST00000409543 CFAP65Q6ZU64 1925 aaKnown RBP30.11■■■□□ 2.41
TSPAN4-209ENST00000409543 LMTK2Q8IWU2 1503 aa30.11■■■□□ 2.41
TSPAN4-209ENST00000409543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.1■■■□□ 2.413e-6■■■■■ 46.2
TSPAN4-209ENST00000409543 ANKLE2Q86XL3 938 aa30.08■■■□□ 2.41
TSPAN4-209ENST00000409543 POLR1AO95602 1720 aaPredicted RBP30.08■■■□□ 2.41
TSPAN4-209ENST00000409543 ROCK1Q13464 1354 aa30.07■■■□□ 2.4
TSPAN4-209ENST00000409543 NEURL4Q96JN8 1562 aa30.04■■■□□ 2.4
TSPAN4-209ENST00000409543 ZNF335Q9H4Z2 1342 aaPredicted RBP30.03■■■□□ 2.4
TSPAN4-209ENST00000409543 EFCAB6Q5THR3 1501 aa29.99■■■□□ 2.39
TSPAN4-209ENST00000409543 UBR1Q8IWV7 1749 aa29.99■■■□□ 2.39
TSPAN4-209ENST00000409543 MED14O60244 1454 aa29.99■■■□□ 2.39
TSPAN4-209ENST00000409543 IQSEC2Q5JU85 1478 aa29.99■■■□□ 2.39
TSPAN4-209ENST00000409543 ITGAEP38570 1179 aa29.98■■■□□ 2.39
TSPAN4-209ENST00000409543 NPHP4O75161 1426 aaPredicted RBP29.96■■■□□ 2.39
TSPAN4-209ENST00000409543 RRBP1Q9P2E9 1410 aaKnown RBP29.94■■■□□ 2.38
TSPAN4-209ENST00000409543 UNC13BO14795 1591 aa29.94■■■□□ 2.38
TSPAN4-209ENST00000409543 NOS1P29475 1434 aa29.93■■■□□ 2.38
TSPAN4-209ENST00000409543 RPRD2Q5VT52 1461 aaKnown RBP29.92■■■□□ 2.38
TSPAN4-209ENST00000409543 PIK3C2BO00750 1634 aa29.91■■■□□ 2.38
TSPAN4-209ENST00000409543 IDI1Q13907 227 aa29.9■■■□□ 2.38
TSPAN4-209ENST00000409543 SYNMO15061 1565 aa29.9■■■□□ 2.38
TSPAN4-209ENST00000409543 TET3O43151 1660 aa29.89■■■□□ 2.38
TSPAN4-209ENST00000409543 ARHGAP23Q9P227 1491 aa29.89■■■□□ 2.38
TSPAN4-209ENST00000409543 SLIT1O75093 1534 aa29.89■■■□□ 2.38
TSPAN4-209ENST00000409543 IQGAP1P46940 1657 aa29.88■■■□□ 2.37
TSPAN4-209ENST00000409543 STAG3Q9UJ98 1225 aa29.87■■■□□ 2.37
TSPAN4-209ENST00000409543 SCAF11Q99590 1463 aaKnown RBP29.87■■■□□ 2.37
TSPAN4-209ENST00000409543 KDM5AP29375 1690 aaKnown RBP29.86■■■□□ 2.37
TSPAN4-209ENST00000409543 SLC52A1Q9NWF4 448 aa29.86■■■□□ 2.37
TSPAN4-209ENST00000409543 GCC2Q8IWJ2 1684 aa29.85■■■□□ 2.37
TSPAN4-209ENST00000409543 LTKP29376 864 aa29.84■■■□□ 2.37
TSPAN4-209ENST00000409543 TXNDC2Q86VQ3 553 aa29.84■■■□□ 2.37
TSPAN4-209ENST00000409543 CPS1P31327 1500 aa29.83■■■□□ 2.37
TSPAN4-209ENST00000409543 TMEM2Q9UHN6 1383 aa29.83■■■□□ 2.37
TSPAN4-209ENST00000409543 EID1Q9Y6B2 187 aa29.83■■■□□ 2.37
TSPAN4-209ENST00000409543 IQGAP3Q86VI3 1631 aa29.82■■■□□ 2.36
TSPAN4-209ENST00000409543 NUP155O75694 1391 aa29.8■■■□□ 2.36
TSPAN4-209ENST00000409543 ADGRB3O60242 1522 aa29.77■■■□□ 2.36
TSPAN4-209ENST00000409543 E9PCH4 1651 aa29.76■■■□□ 2.35
TSPAN4-209ENST00000409543 UBAP1LF5GYI3 381 aa29.73■■■□□ 2.35
TSPAN4-209ENST00000409543 NAIPQ13075 1403 aa29.71■■■□□ 2.35
TSPAN4-209ENST00000409543 STRCP1A6NGW2 1772 aa29.67■■■□□ 2.34
TSPAN4-209ENST00000409543 TMEM131LA2VDJ0 1609 aa29.65■■■□□ 2.34
TSPAN4-209ENST00000409543 HFM1A2PYH4 1435 aa29.62■■■□□ 2.33
TSPAN4-209ENST00000409543 MYO5BQ9ULV0 1848 aa29.62■■■□□ 2.33
TSPAN4-209ENST00000409543 LRRC7Q96NW7 1537 aa29.62■■■□□ 2.33
TSPAN4-209ENST00000409543 HDGFP51858 240 aaKnown RBP29.62■■■□□ 2.33
TSPAN4-209ENST00000409543 ZFYVE9O95405 1425 aa29.62■■■□□ 2.33
TSPAN4-209ENST00000409543 TOM1O60784 492 aa29.61■■■□□ 2.33
TSPAN4-209ENST00000409543 CHGAP10645 457 aaKnown RBP29.6■■■□□ 2.33
TSPAN4-209ENST00000409543 RIMS2Q9UQ26 1411 aa29.59■■■□□ 2.33
TSPAN4-209ENST00000409543 SLC26A8Q96RN1 970 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms